Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XMF	38475	2025-08-22	2023-12-27	3.64	4.12	3.75	4.0	0.015	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.65	0.0	0.04	16.28	0.00	1.857	8.87	5.63	4.7	95.3	0.0	1.38	0.99	0.59	0.80	1.87	4929	636	4	0	13	0	0	logfile
✔	8VGH	43200	2025-08-24	2023-12-27	2.9	4.11	3.06	3.9	0.011	0.94	0.0	0.05	12.79	0.01	2.239	6.69	0.13	7.1	92.4	0.5	-1.33	0.82	0.82	3.38	3.9	0.004	0.79	0.0	0.05	15.60	0.01	2.407	8.79	3.10	3.5	96.5	0.0	0.17	0.76	0.82	0.82	2.69	20472	2668	12	0	0	0	0	logfile
✔	8VGH	43200	2025-06-18	2023-12-27	2.9	4.11	3.06	3.9	0.011	0.94	0.0	0.05	12.79	0.01	2.239	6.69	0.13	7.1	92.4	0.5	-1.33	0.82	0.82	3.38	3.9	0.005	0.81	0.0	0.05	15.55	0.01	2.391	9.41	3.18	3.4	96.6	0.0	-0.05	0.75	0.82	0.82	2.86	20472	2668	12	0	0	0	0	logfile
✔	8XMF	38475	2025-03-06	2023-12-27	3.64	4.12	3.75	4.0	0.005	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.64	0.0	0.04	16.25	0.00	1.878	8.97	4.83	4.2	95.8	0.0	1.42	0.54	0.59	0.80	1.65	4929	636	4	0	13	0	0	logfile
✔	8XMF	38475	2025-04-27	2023-12-27	3.64	4.12	3.75	4.0	0.015	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.64	0.0	0.04	16.31	0.00	1.863	10.08	7.04	4.2	95.8	0.0	1.39	0.53	0.59	0.81	1.88	4929	636	4	0	13	0	0	logfile
✔	8XMF	38475	2025-01-14	2023-12-27	3.64	4.12	3.77	4.0	0.005	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.65	0.0	0.04	16.42	0.00	1.864	8.87	5.63	4.5	95.5	0.0	1.32	0.54	0.59	0.81	1.93	4929	636	4	0	13	0	0	logfile
✔	8XMF	38475	2025-02-11	2023-12-27	3.64	4.12	3.77	4.0	0.005	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.65	0.0	0.04	16.42	0.00	1.864	8.87	5.63	4.5	95.5	0.0	1.32	0.54	0.59	0.81	1.93	4929	636	4	0	13	0	0	logfile
✔	8XMF	38475	2025-07-24	2023-12-27	3.64	4.12	3.75	4.0	0.015	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.64	0.0	0.04	16.31	0.00	1.863	10.08	7.04	4.2	95.8	0.0	1.39	0.53	0.59	0.81	1.88	4929	636	4	0	13	0	0	logfile
✔	8XM6	38465	2025-04-27	2023-12-27	3.48	3.62	3.57	3.7	0.015	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.009	0.59	0.0	0.04	15.79	0.00	2.096	8.46	3.28	3.0	97.0	0.0	2.69	0.49	0.56	0.80	1.69	5205	645	4	0	13	0	0	logfile
✔	8XM6	38465	2025-03-06	2023-12-27	3.48	3.62	3.57	3.7	0.004	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.003	0.60	0.0	0.04	15.75	0.00	2.082	8.27	3.47	2.7	97.3	0.0	2.57	0.49	0.57	0.80	1.88	5205	645	4	0	13	0	0	logfile
✔	8XM6	38465	2025-02-11	2023-12-27	3.48	3.62	3.58	3.7	0.004	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.003	0.58	0.0	0.04	15.79	0.00	2.100	8.08	3.28	2.7	97.3	0.0	2.70	0.47	0.56	0.80	1.88	5205	645	4	0	13	0	0	logfile
✔	8XMF	38475	2025-05-10	2023-12-27	3.64	4.12	3.75	4.0	0.015	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.004	0.69	0.0	0.04	16.41	0.00	1.859	9.37	6.04	4.2	95.8	0.0	1.34	1.00	0.60	0.81	1.87	4929	636	4	0	13	0	0	logfile
✔	8XMF	38475	2025-06-05	2023-12-27	3.64	4.12	3.75	4.0	0.015	0.69	0.0	0.04	19.98	0.00	1.982	9.07	0.00	5.3	94.7	0.0	1.35	0.59	0.80	2.19	4.1	0.003	0.64	0.0	0.04	16.31	0.00	1.863	10.08	7.04	4.2	95.8	0.0	1.39	0.53	0.59	0.81	1.88	4929	636	4	0	13	0	0	logfile
✔	8XM6	38465	2025-05-10	2023-12-27	3.48	3.62	3.57	3.7	0.015	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.009	0.60	0.0	0.04	15.83	0.00	2.093	8.46	3.67	2.9	97.1	0.0	2.66	0.48	0.56	0.80	1.89	5205	645	4	0	13	0	0	logfile
✔	8XM6	38465	2024-12-27	2023-12-27	3.48	3.62	3.58	3.7	0.004	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.003	0.59	0.0	0.04	15.77	0.00	2.032	7.70	3.09	2.5	97.5	0.0	2.76	0.49	0.56	0.80	1.69	5205	645	4	0	13	0	0	logfile
✔	8XM6	38465	2025-06-05	2023-12-27	3.48	3.62	3.57	3.7	0.015	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.009	0.59	0.0	0.04	15.79	0.00	2.096	8.46	3.28	3.0	97.0	0.0	2.69	0.49	0.56	0.80	1.69	5205	645	4	0	13	0	0	logfile
✔	8XM6	38465	2025-07-24	2023-12-27	3.48	3.62	3.57	3.7	0.015	0.68	0.0	0.04	23.94	0.00	2.004	8.27	0.00	4.1	95.9	0.0	2.70	0.57	0.77	1.78	3.7	0.009	0.59	0.0	0.04	15.79	0.00	2.096	8.46	3.28	3.0	97.0	0.0	2.69	0.49	0.56	0.80	1.69	5205	645	4	0	13	0	0	logfile
✔	8XML	38481	2025-03-12	2023-12-27	2.58	3.37	2.66	3.2	0.005	0.84	0.0	0.05	9.18	0.01	2.236	4.22	0.00	3.9	96.0	0.1	-2.93	0.72	0.84	4.38	3.2	0.003	0.68	0.0	0.04	14.90	0.00	2.517	7.59	2.38	3.1	96.9	0.0	0.19	0.71	0.72	0.85	3.67	8245	1071	5	0	0	0	0	logfile
✔	8XML	38481	2025-07-26	2023-12-27	2.58	3.37	2.66	3.2	0.005	0.84	0.0	0.05	9.18	0.01	2.236	4.22	0.00	3.9	96.0	0.1	-2.93	0.72	0.84	4.38	3.2	0.003	0.68	0.0	0.04	14.90	0.00	2.517	7.59	2.38	3.1	96.9	0.0	0.19	0.71	0.72	0.85	3.67	8245	1071	5	0	0	0	0	logfile
✔	8XML	38481	2025-06-06	2023-12-27	2.58	3.37	2.66	3.2	0.005	0.84	0.0	0.05	9.18	0.01	2.236	4.22	0.00	3.9	96.0	0.1	-2.93	0.72	0.84	4.38	3.2	0.003	0.68	0.0	0.04	14.90	0.00	2.517	7.59	2.38	3.1	96.9	0.0	0.19	0.71	0.72	0.85	3.67	8245	1071	5	0	0	0	0	logfile

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