The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8QYK | 18756 | 2025-01-21 | 2023-10-26 | 2.07 | 2.21 | 2.13 | 2.2 | 0.008 | 1.37 | 0.0 | 0.05 | 18.96 | 0.01 | 2.122 | 7.71 | 0.19 | 1.4 | 98.6 | 0.0 | 3.54 | 0.69 | 0.85 | 4.06 | 2.2 | 0.003 | 0.54 | 0.0 | 0.04 | 18.02 | 0.00 | 2.248 | 6.61 | 0.68 | 1.4 | 98.6 | 0.0 | 3.74 | 0.92 | 0.68 | 0.86 | 4.22 | 16182 | 1817 | 19 | 0 | 15 | 866 | 0 | logfile |
✔ | 8QYK | 18756 | 2025-06-14 | 2023-10-26 | 2.07 | 2.21 | 2.13 | 2.2 | 0.008 | 1.37 | 0.0 | 0.05 | 18.96 | 0.01 | 2.122 | 7.71 | 0.19 | 1.4 | 98.6 | 0.0 | 3.54 | 0.69 | 0.85 | 4.06 | 2.2 | 0.003 | 0.54 | 0.0 | 0.04 | 18.09 | 0.00 | 2.240 | 6.45 | 0.99 | 1.3 | 98.7 | 0.0 | 3.79 | 0.41 | 0.68 | 0.86 | 4.19 | 16182 | 1817 | 19 | 0 | 15 | 866 | 0 | logfile |
✔ | 8QYM | 18758 | 2025-06-19 | 2023-10-26 | 2.73 | 3.22 | 2.84 | 3.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.61 | 0.01 | 2.215 | 2.77 | 0.04 | 2.4 | 97.6 | 0.0 | 1.18 | 0.81 | 0.89 | 3.16 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 15.74 | 0.00 | 2.487 | 2.65 | 0.84 | 2.9 | 97.1 | 0.0 | 1.29 | 0.30 | 0.80 | 0.90 | 2.80 | 22235 | 2848 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 8QYN | 18759 | 2025-06-24 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.60 | 0.00 | 2.356 | 2.82 | 0.83 | 2.9 | 97.1 | 0.0 | 1.22 | 1.24 | 0.81 | 0.90 | 2.69 | 29115 | 3731 | 18 | 0 | 22 | 0 | 0 | logfile |
✔ | 8QZ9 | 18773 | 2025-05-23 | 2023-10-26 | 2.95 | 3.51 | 3.10 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.37 | 0.00 | 2.202 | 3.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.82 | 0.79 | 0.87 | 3.07 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.55 | 0.00 | 2.485 | 2.85 | 1.09 | 3.5 | 96.5 | 0.0 | 1.20 | 0.90 | 0.75 | 0.84 | 2.44 | 24217 | 3213 | 16 | 0 | 21 | 0 | 0 | logfile |
✔ | 8QYN | 18759 | 2025-05-26 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.62 | 0.00 | 2.372 | 2.96 | 0.77 | 2.9 | 97.1 | 0.0 | 1.31 | 1.24 | 0.81 | 0.90 | 2.62 | 29115 | 3731 | 18 | 0 | 22 | 0 | 0 | logfile |
✔ | 8QYM | 18758 | 2025-01-24 | 2023-10-26 | 2.73 | 3.22 | 2.84 | 3.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.61 | 0.01 | 2.215 | 2.77 | 0.04 | 2.4 | 97.6 | 0.0 | 1.18 | 0.81 | 0.89 | 3.16 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.502 | 2.70 | 0.92 | 2.6 | 97.4 | 0.0 | 1.19 | 0.90 | 0.80 | 0.90 | 2.78 | 22235 | 2848 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 8QYM | 18758 | 2025-05-21 | 2023-10-26 | 2.73 | 3.22 | 2.84 | 3.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.61 | 0.01 | 2.215 | 2.77 | 0.04 | 2.4 | 97.6 | 0.0 | 1.18 | 0.81 | 0.89 | 3.16 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.502 | 2.70 | 0.92 | 2.6 | 97.4 | 0.0 | 1.19 | 0.90 | 0.80 | 0.90 | 2.78 | 22235 | 2848 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 8QZ9 | 18773 | 2025-01-25 | 2023-10-26 | 2.95 | 3.51 | 3.11 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.37 | 0.00 | 2.202 | 3.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.82 | 0.79 | 0.87 | 3.07 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.55 | 0.00 | 2.485 | 2.85 | 1.09 | 3.5 | 96.5 | 0.0 | 1.20 | 0.90 | 0.75 | 0.84 | 2.44 | 24217 | 3213 | 16 | 0 | 21 | 0 | 0 | logfile |
✔ | 8QZ9 | 18773 | 2025-06-20 | 2023-10-26 | 2.95 | 3.51 | 3.10 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.37 | 0.00 | 2.202 | 3.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.82 | 0.79 | 0.87 | 3.07 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.62 | 0.00 | 2.491 | 2.93 | 1.22 | 4.0 | 96.0 | 0.0 | 1.10 | 0.90 | 0.76 | 0.84 | 2.55 | 24217 | 3213 | 16 | 0 | 21 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2024-12-29 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.12 | 0.00 | 2.342 | 6.11 | 1.52 | 4.2 | 95.8 | 0.0 | 0.53 | 0.34 | 0.74 | 0.81 | 1.87 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2024-10-12 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.12 | 0.00 | 2.342 | 6.11 | 1.52 | 4.2 | 95.8 | 0.0 | 0.53 | 0.34 | 0.74 | 0.81 | 1.87 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2025-07-29 | 2023-10-26 | 3.29 | 3.49 | 3.38 | 3.5 | 0.004 | 0.82 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.13 | 0.00 | 2.320 | 6.42 | 1.28 | 4.3 | 95.7 | 0.0 | 0.43 | 0.34 | 0.74 | 0.82 | 2.02 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2025-06-10 | 2023-10-26 | 3.29 | 3.49 | 3.38 | 3.5 | 0.004 | 0.82 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.13 | 0.00 | 2.320 | 6.42 | 1.28 | 4.3 | 95.7 | 0.0 | 0.43 | 0.34 | 0.74 | 0.82 | 2.02 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2025-05-14 | 2023-10-26 | 3.29 | 3.49 | 3.38 | 3.5 | 0.004 | 0.82 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 15.16 | 0.00 | 2.328 | 6.55 | 1.52 | 4.6 | 95.4 | 0.0 | 0.35 | 0.35 | 0.74 | 0.82 | 1.87 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2024-11-16 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.12 | 0.00 | 2.342 | 6.11 | 1.52 | 4.2 | 95.8 | 0.0 | 0.53 | 0.34 | 0.74 | 0.81 | 1.87 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QYL | 18757 | 2024-11-20 | 2023-10-26 | 2.67 | 3.11 | 2.73 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 13.75 | 0.01 | 2.225 | 3.90 | 0.00 | 2.3 | 97.7 | 0.0 | 0.91 | 0.77 | 0.87 | 3.32 | 3.0 | 0.006 | 0.74 | 1.0 | 0.05 | 15.86 | 0.01 | 2.246 | 3.69 | 1.94 | 2.4 | 97.6 | 0.0 | 1.15 | 0.90 | 0.75 | 0.87 | 2.98 | 20997 | 2675 | 13 | 0 | 19 | 0 | 0 | logfile |
✘ | 8QYL | 18757 | 2025-06-18 | 2023-10-26 | 2.67 | 3.11 | 2.72 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 13.75 | 0.01 | 2.225 | 3.90 | 0.00 | 2.3 | 97.7 | 0.0 | 0.91 | 0.77 | 0.87 | 3.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20997 | 2675 | 13 | 0 | 19 | 0 | 0 | logfile |
✔ | 8QYL | 18757 | 2025-01-23 | 2023-10-26 | 2.67 | 3.11 | 2.73 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 13.75 | 0.01 | 2.225 | 3.90 | 0.00 | 2.3 | 97.7 | 0.0 | 0.91 | 0.77 | 0.87 | 3.32 | 3.0 | 0.004 | 0.71 | 1.0 | 0.04 | 15.77 | 0.00 | 2.306 | 3.76 | 1.63 | 2.3 | 97.7 | 0.0 | 1.27 | 0.90 | 0.76 | 0.87 | 2.96 | 20997 | 2675 | 13 | 0 | 19 | 0 | 0 | logfile |
✔ | 8QYL | 18757 | 2025-05-21 | 2023-10-26 | 2.67 | 3.11 | 2.72 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 13.75 | 0.01 | 2.225 | 3.90 | 0.00 | 2.3 | 97.7 | 0.0 | 0.91 | 0.77 | 0.87 | 3.32 | 3.0 | 0.004 | 0.71 | 1.0 | 0.04 | 15.77 | 0.00 | 2.306 | 3.76 | 1.63 | 2.3 | 97.7 | 0.0 | 1.27 | 0.90 | 0.76 | 0.87 | 2.96 | 20997 | 2675 | 13 | 0 | 19 | 0 | 0 | logfile |