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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8QYS | 18761 | 2024-10-11 | 2023-10-26 | 3.89 | 4.28 | 3.89 | 4.1 | 0.003 | 0.57 | 2.0 | 0.04 | 14.29 | 0.00 | 2.222 | 9.04 | 0.00 | 10.1 | 89.9 | 0.0 | -1.10 | 0.85 | 0.85 | 1.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57862 | 7588 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYL | 18757 | 2025-05-21 | 2023-10-26 | 2.67 | 3.11 | 2.72 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 13.75 | 0.01 | 2.225 | 3.90 | 0.00 | 2.3 | 97.7 | 0.0 | 0.91 | 0.77 | 0.87 | 3.32 | 3.0 | 0.004 | 0.71 | 1.0 | 0.04 | 15.77 | 0.00 | 2.306 | 3.76 | 1.63 | 2.3 | 97.7 | 0.0 | 1.27 | 0.90 | 0.76 | 0.87 | 2.96 | 20997 | 2675 | 13 | 0 | 19 | 0 | 0 | logfile |
✔ | 8QYS | 18761 | 2025-01-18 | 2023-10-26 | 3.89 | 4.28 | 3.89 | 4.1 | 0.003 | 0.57 | 2.0 | 0.04 | 14.29 | 0.00 | 2.222 | 9.04 | 0.00 | 10.1 | 89.9 | 0.0 | -1.10 | 0.85 | 0.85 | 1.27 | 4.1 | 0.004 | 0.80 | 5.0 | 0.04 | 16.09 | 0.00 | 2.165 | 8.11 | 2.30 | 9.1 | 90.9 | 0.0 | -1.03 | 0.29 | 0.85 | 0.85 | 1.09 | 57862 | 7588 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 8URT | 42500 | 2025-02-11 | 2023-10-26 | 3.8 | 3.27 | 3.04 | 3.3 | 0.008 | 1.44 | 0.0 | 0.04 | 21.44 | 0.00 | 1.995 | 5.02 | 1.90 | 2.7 | 97.3 | 0.0 | 2.20 | 0.54 | 0.76 | 2.55 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 17.34 | 0.00 | 1.999 | 3.90 | 2.05 | 2.3 | 97.7 | 0.0 | 2.70 | 0.25 | 0.62 | 0.80 | 2.50 | 6622 | 774 | 6 | 0 | 14 | 2 | 0 | logfile |
✔ | 8URT | 42500 | 2025-04-27 | 2023-10-26 | 3.8 | 3.27 | 3.05 | 3.3 | 0.008 | 1.44 | 0.0 | 0.04 | 21.44 | 0.00 | 1.995 | 5.02 | 1.90 | 2.7 | 97.3 | 0.0 | 2.20 | 0.54 | 0.76 | 2.55 | 3.3 | 0.002 | 0.52 | 0.0 | 0.04 | 17.40 | 0.00 | 2.011 | 3.90 | 1.90 | 2.3 | 97.7 | 0.0 | 2.62 | 0.24 | 0.62 | 0.80 | 2.57 | 6622 | 774 | 6 | 0 | 14 | 2 | 0 | logfile |
✔ | 8URT | 42500 | 2025-03-11 | 2023-10-26 | 3.8 | 3.27 | 3.05 | 3.3 | 0.008 | 1.44 | 0.0 | 0.04 | 21.44 | 0.00 | 1.995 | 5.02 | 1.90 | 2.7 | 97.3 | 0.0 | 2.20 | 0.54 | 0.76 | 2.55 | 3.3 | 0.002 | 0.52 | 0.0 | 0.04 | 17.40 | 0.00 | 2.011 | 3.90 | 1.90 | 2.3 | 97.7 | 0.0 | 2.62 | 0.24 | 0.62 | 0.80 | 2.57 | 6622 | 774 | 6 | 0 | 14 | 2 | 0 | logfile |
✔ | 8URT | 42500 | 2025-01-14 | 2023-10-26 | 3.8 | 3.27 | 3.04 | 3.3 | 0.008 | 1.44 | 0.0 | 0.04 | 21.44 | 0.00 | 1.995 | 5.02 | 1.90 | 2.7 | 97.3 | 0.0 | 2.20 | 0.54 | 0.76 | 2.55 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 17.34 | 0.00 | 1.999 | 3.90 | 2.05 | 2.3 | 97.7 | 0.0 | 2.70 | 0.25 | 0.62 | 0.80 | 2.50 | 6622 | 774 | 6 | 0 | 14 | 2 | 0 | logfile |
✔ | 8QZC | 18774 | 2025-01-17 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 15.20 | 0.00 | 2.337 | 6.33 | 1.28 | 4.3 | 95.7 | 0.0 | 0.36 | 0.34 | 0.74 | 0.82 | 2.06 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2024-02-15 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.12 | 0.00 | 2.124 | 7.46 | 2.00 | 4.5 | 95.5 | 0.0 | 0.41 | 0.75 | 0.74 | 0.82 | 1.85 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2024-02-21 | 2023-10-26 | 2.79 | 3.49 | 2.93 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.005 | 0.63 | 0.0 | 0.04 | 20.41 | 0.00 | 2.113 | 6.99 | 3.58 | 7.2 | 92.6 | 0.3 | -0.90 | 0.38 | 0.83 | 0.89 | 2.20 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-12-27 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYN | 18759 | 2025-06-24 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.60 | 0.00 | 2.356 | 2.82 | 0.83 | 2.9 | 97.1 | 0.0 | 1.22 | 1.24 | 0.81 | 0.90 | 2.69 | 29115 | 3731 | 18 | 0 | 22 | 0 | 0 | logfile |
✔ | 8QYN | 18759 | 2025-05-26 | 2023-10-26 | 2.88 | 3.46 | 3.04 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 2.265 | 3.18 | 0.00 | 3.4 | 96.6 | 0.0 | 1.04 | 0.80 | 0.88 | 3.11 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.62 | 0.00 | 2.372 | 2.96 | 0.77 | 2.9 | 97.1 | 0.0 | 1.31 | 1.24 | 0.81 | 0.90 | 2.62 | 29115 | 3731 | 18 | 0 | 22 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-11-18 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-10-09 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2025-01-13 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.01 | 0.00 | 2.484 | 3.22 | 1.55 | 1.8 | 98.2 | 0.0 | 1.45 | 0.32 | 0.71 | 0.83 | 2.96 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2025-05-28 | 2023-10-26 | 2.79 | 3.49 | 2.92 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.38 | 0.00 | 2.054 | 4.71 | 2.22 | 6.0 | 93.8 | 0.3 | -0.56 | 0.94 | 0.81 | 0.87 | 2.03 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2025-06-26 | 2023-10-26 | 2.79 | 3.49 | 2.92 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.37 | 0.00 | 2.057 | 4.70 | 2.62 | 6.2 | 93.5 | 0.3 | -0.62 | 0.94 | 0.81 | 0.87 | 2.08 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8WWP | 37895 | 2024-12-30 | 2023-10-26 | 3.12 | 3.73 | 3.38 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 17.17 | 0.00 | 2.262 | 9.97 | 0.07 | 4.3 | 95.5 | 0.2 | 0.23 | 0.74 | 0.72 | 0.91 | 3.6 | 0.004 | 0.65 | 0.0 | 0.05 | 17.73 | 0.00 | 2.470 | 10.88 | 7.25 | 5.0 | 95.0 | 0.0 | 0.28 | 0.95 | 0.68 | 0.69 | 1.10 | 13125 | 1749 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WWP | 37895 | 2025-01-18 | 2023-10-26 | 3.12 | 3.73 | 3.38 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 17.17 | 0.00 | 2.262 | 9.97 | 0.07 | 4.3 | 95.5 | 0.2 | 0.23 | 0.74 | 0.72 | 0.91 | 3.6 | 0.004 | 0.65 | 0.0 | 0.05 | 17.78 | 0.00 | 2.462 | 10.65 | 6.30 | 4.8 | 95.2 | 0.0 | 0.26 | 0.94 | 0.68 | 0.68 | 1.13 | 13125 | 1749 | 3 | 0 | 0 | 0 | 0 | logfile |