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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8URQ | 42497 | 2025-07-26 | 2023-10-26 | 3.3 | 3.57 | 3.32 | 3.6 | 0.017 | 1.25 | 1.0 | 0.06 | 21.28 | 0.01 | 1.769 | 18.16 | 4.61 | 10.8 | 88.9 | 0.3 | -3.76 | 0.71 | 0.71 | 1.02 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 20.86 | 0.00 | 1.937 | 8.40 | 3.71 | 9.4 | 90.6 | 0.0 | -2.64 | 0.52 | 0.71 | 0.72 | 1.02 | 8569 | 993 | 6 | 31 | 1 | 0 | 0 | logfile |
✔ | 8URQ | 42497 | 2024-10-10 | 2023-10-26 | 3.3 | 3.57 | 3.32 | 3.6 | 0.017 | 1.25 | 1.0 | 0.06 | 21.28 | 0.01 | 1.769 | 18.16 | 4.61 | 10.8 | 88.9 | 0.3 | -3.76 | 0.71 | 0.71 | 1.02 | 3.6 | 0.005 | 0.75 | 0.0 | 0.04 | 20.87 | 0.00 | 1.835 | 10.54 | 4.94 | 12.7 | 87.3 | 0.0 | -3.06 | 0.52 | 0.72 | 0.74 | 0.97 | 8569 | 993 | 6 | 31 | 1 | 0 | 0 | logfile |
✔ | 8URQ | 42497 | 2024-12-28 | 2023-10-26 | 3.3 | 3.57 | 3.32 | 3.6 | 0.017 | 1.25 | 1.0 | 0.06 | 21.28 | 0.01 | 1.769 | 18.16 | 4.61 | 10.8 | 88.9 | 0.3 | -3.76 | 0.71 | 0.71 | 1.02 | 3.6 | 0.005 | 0.75 | 0.0 | 0.04 | 20.87 | 0.00 | 1.835 | 10.54 | 4.94 | 12.7 | 87.3 | 0.0 | -3.06 | 0.52 | 0.72 | 0.74 | 0.97 | 8569 | 993 | 6 | 31 | 1 | 0 | 0 | logfile |
✔ | 8QYJ | 18755 | 2024-11-19 | 2023-10-26 | 2.73 | 3.16 | 2.80 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 2.65 | 0.00 | 2.0 | 98.0 | 0.0 | 1.76 | 0.79 | 0.88 | 3.08 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 15.91 | 0.00 | 2.208 | 2.21 | 1.28 | 2.3 | 97.7 | 0.0 | 1.79 | 0.28 | 0.76 | 0.88 | 2.93 | 19402 | 2498 | 13 | 0 | 3 | 0 | 0 | logfile |
✔ | 8QYJ | 18755 | 2025-01-22 | 2023-10-26 | 2.73 | 3.16 | 2.80 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 2.65 | 0.00 | 2.0 | 98.0 | 0.0 | 1.76 | 0.79 | 0.88 | 3.08 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 15.91 | 0.00 | 2.455 | 2.26 | 1.47 | 2.2 | 97.8 | 0.0 | 1.90 | 0.27 | 0.75 | 0.86 | 2.75 | 19402 | 2498 | 13 | 0 | 3 | 0 | 0 | logfile |
✔ | 8QZ8 | 18772 | 2025-06-19 | 2023-10-26 | 3.13 | 3.36 | 3.18 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 18.09 | 0.00 | 1.861 | 3.62 | 0.09 | 3.3 | 96.5 | 0.1 | 1.13 | 0.67 | 0.84 | 3.19 | 3.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.66 | 0.00 | 2.015 | 2.69 | 1.29 | 4.3 | 95.7 | 0.0 | 0.89 | 2.00 | 0.71 | 0.86 | 3.26 | 22629 | 1356 | 8 | 42 | 5 | 0 | 11077 | logfile |
✔ | 8QZ8 | 18772 | 2025-05-22 | 2023-10-26 | 3.13 | 3.36 | 3.18 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 18.09 | 0.00 | 1.861 | 3.62 | 0.09 | 3.3 | 96.5 | 0.1 | 1.13 | 0.67 | 0.84 | 3.19 | 3.4 | 0.004 | 0.80 | 1.0 | 0.04 | 17.70 | 0.00 | 1.193 | 3.00 | 1.55 | 4.2 | 95.8 | 0.0 | 0.83 | 1.99 | 0.71 | 0.86 | 3.26 | 22629 | 1356 | 8 | 42 | 5 | 0 | 11077 | logfile |
✔ | 8QYJ | 18755 | 2025-05-19 | 2023-10-26 | 2.73 | 3.16 | 2.80 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 2.65 | 0.00 | 2.0 | 98.0 | 0.0 | 1.76 | 0.79 | 0.88 | 3.08 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 15.91 | 0.00 | 2.455 | 2.26 | 1.47 | 2.2 | 97.8 | 0.0 | 1.90 | 0.27 | 0.75 | 0.86 | 2.75 | 19402 | 2498 | 13 | 0 | 3 | 0 | 0 | logfile |
✔ | 8QZ8 | 18772 | 2024-02-18 | 2023-10-26 | 3.13 | 3.36 | 3.18 | 3.4 | 0.003 | 0.46 | 0.0 | 0.04 | 18.09 | 0.00 | 1.861 | 3.62 | 0.09 | 3.3 | 96.5 | 0.1 | 1.13 | 0.67 | 0.84 | 3.19 | 3.4 | 0.004 | 0.77 | 1.0 | 0.04 | 17.70 | 0.00 | 1.865 | 4.24 | 1.20 | 4.2 | 95.8 | 0.1 | 0.94 | 1.99 | 0.71 | 0.86 | 3.26 | 22629 | 1356 | 8 | 42 | 5 | 0 | 11077 | logfile |
✔ | 8QZ8 | 18772 | 2025-01-25 | 2023-10-26 | 3.13 | 3.36 | 3.18 | 3.4 | 0.003 | 0.46 | 0.0 | 0.04 | 18.09 | 0.00 | 1.861 | 3.62 | 0.09 | 3.3 | 96.5 | 0.1 | 1.13 | 0.67 | 0.84 | 3.19 | 3.4 | 0.004 | 0.78 | 1.0 | 0.04 | 17.74 | 0.00 | 1.208 | 3.36 | 1.20 | 4.5 | 95.5 | 0.0 | 0.65 | 1.99 | 0.71 | 0.86 | 3.27 | 22629 | 1356 | 8 | 42 | 5 | 0 | 11077 | logfile |
✔ | 8QYJ | 18755 | 2024-10-14 | 2023-10-26 | 2.73 | 3.16 | 2.80 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 2.65 | 0.00 | 2.0 | 98.0 | 0.0 | 1.76 | 0.79 | 0.88 | 3.08 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 15.91 | 0.00 | 2.208 | 2.21 | 1.28 | 2.3 | 97.7 | 0.0 | 1.79 | 0.28 | 0.76 | 0.88 | 2.93 | 19402 | 2498 | 13 | 0 | 3 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2025-06-26 | 2023-10-26 | 2.79 | 3.49 | 2.92 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.37 | 0.00 | 2.057 | 4.70 | 2.62 | 6.2 | 93.5 | 0.3 | -0.62 | 0.94 | 0.81 | 0.87 | 2.08 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8QYJ | 18755 | 2025-06-16 | 2023-10-26 | 2.73 | 3.16 | 2.80 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 2.65 | 0.00 | 2.0 | 98.0 | 0.0 | 1.76 | 0.79 | 0.88 | 3.08 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 15.87 | 0.00 | 2.259 | 2.32 | 1.38 | 2.4 | 97.6 | 0.0 | 1.80 | 0.27 | 0.75 | 0.87 | 2.88 | 19402 | 2498 | 13 | 0 | 3 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2025-01-13 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.01 | 0.00 | 2.484 | 3.22 | 1.55 | 1.8 | 98.2 | 0.0 | 1.45 | 0.32 | 0.71 | 0.83 | 2.96 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-10-09 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-11-18 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QYo | 18760 | 2024-12-27 | 2023-10-26 | 2.84 | 3.26 | 2.99 | 3.2 | 0.006 | 0.66 | 0.0 | 0.05 | 13.09 | 0.00 | 2.208 | 3.23 | 0.02 | 2.6 | 97.4 | 0.0 | 0.66 | 0.75 | 0.84 | 3.57 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 16.11 | 0.00 | 2.478 | 3.44 | 1.68 | 1.7 | 98.3 | 0.0 | 1.47 | 0.33 | 0.74 | 0.84 | 2.93 | 47940 | 6174 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2024-02-21 | 2023-10-26 | 2.79 | 3.49 | 2.93 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.005 | 0.63 | 0.0 | 0.04 | 20.41 | 0.00 | 2.113 | 6.99 | 3.58 | 7.2 | 92.6 | 0.3 | -0.90 | 0.38 | 0.83 | 0.89 | 2.20 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8URW | 42502 | 2025-05-28 | 2023-10-26 | 2.79 | 3.49 | 2.92 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 20.95 | 0.00 | 2.226 | 6.27 | 4.41 | 6.1 | 93.5 | 0.3 | -0.96 | 0.87 | 0.91 | 2.20 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.38 | 0.00 | 2.054 | 4.71 | 2.22 | 6.0 | 93.8 | 0.3 | -0.56 | 0.94 | 0.81 | 0.87 | 2.03 | 29896 | 3574 | 13 | 94 | 4 | 0 | 0 | logfile |
✔ | 8QYS | 18761 | 2024-12-29 | 2023-10-26 | 3.89 | 4.28 | 3.89 | 4.1 | 0.003 | 0.57 | 2.0 | 0.04 | 14.29 | 0.00 | 2.222 | 9.04 | 0.00 | 10.1 | 89.9 | 0.0 | -1.10 | 0.85 | 0.85 | 1.27 | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 16.08 | 0.00 | 2.401 | 7.30 | 2.05 | 7.9 | 92.1 | 0.0 | -0.85 | 0.30 | 0.85 | 0.85 | 1.08 | 57862 | 7588 | 34 | 0 | 0 | 0 | 0 | logfile |