Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BRY	44845	2024-08-08	2024-05-12	3.6	3.97	3.81	4.0	0.005	0.88	0.0	0.04	16.14	0.01	2.423	5.08	2.88	4.2	95.8	0.0	-0.33	0.59	0.66	0.71	4.0	0.004	0.78	0.0	0.04	17.08	0.00	2.503	12.44	5.11	4.9	95.1	0.0	0.37	4.47	0.59	0.67	0.65	23530	3066	20	0	12	0	0	logfile
✔	9BRZ	44846	2024-09-30	2024-05-12	3.8	4.20	3.95	4.1	0.006	0.92	0.0	0.04	16.83	0.01	2.117	5.44	3.59	4.7	95.3	0.0	-0.20	0.61	0.74	1.07	4.1	0.004	0.80	0.0	0.04	17.50	0.00	2.330	13.27	6.84	4.7	95.3	0.0	0.85	0.63	0.64	0.77	0.92	25204	3277	22	0	12	0	0	logfile
✔	9BRY	44845	2025-01-25	2024-05-12	3.6	3.97	3.81	4.0	0.005	0.88	0.0	0.04	16.14	0.01	2.423	5.08	2.88	4.2	95.8	0.0	-0.33	0.59	0.66	0.71	4.0	0.003	0.76	0.0	0.04	17.04	0.00	2.496	12.21	4.46	4.2	95.7	0.0	0.58	4.47	0.58	0.67	0.63	23530	3066	20	0	12	0	0	logfile
✔	9BRY	44845	2024-09-29	2024-05-12	3.6	3.97	3.81	4.0	0.005	0.88	0.0	0.04	16.14	0.01	2.423	5.08	2.88	4.2	95.8	0.0	-0.33	0.59	0.66	0.71	4.0	0.004	0.78	0.0	0.04	17.08	0.00	2.503	12.44	5.11	4.9	95.1	0.0	0.37	4.47	0.59	0.67	0.65	23530	3066	20	0	12	0	0	logfile
✔	9BRY	44845	2024-07-23	2024-05-12	3.6	3.97	3.81	4.0	0.005	0.88	0.0	0.04	16.14	0.01	2.423	5.08	2.88	4.2	95.8	0.0	-0.33	0.59	0.66	0.71	4.0	0.004	0.76	0.0	0.04	17.13	0.00	2.136	13.57	6.36	4.8	95.1	0.0	0.50	4.46	0.59	0.67	0.65	23530	3066	20	0	12	0	0	logfile
✘	8Zi3	60120	2025-01-26	2024-05-12	2.89	3.47	2.95	3.4	0.003	0.61	0.0	0.04	15.15	0.00	1.833	7.86	0.00	2.9	97.1	0.0	0.35	0.80	0.86	2.64	—	—	—	—	—	—	—	—	—	—	—	—	—	0.56	—	—	—	2.38	24671	3226	13	0	11	0	0	logfile
✔	9BS0	44849	2025-01-26	2024-05-12	3.3	4.51	3.72	3.3	0.005	0.79	1.0	0.04	25.86	0.00	1.095	14.64	0.55	7.7	92.2	0.1	-2.49	0.88	0.85	1.33	3.3	0.003	0.68	0.0	0.04	25.40	0.00	2.009	10.85	5.36	5.5	94.5	0.0	-1.18	1.03	0.88	0.87	1.27	81446	2867	26	2789	2	0	0	logfile
✔	9BRU	44844	2024-10-13	2024-05-11	4.4	3.70	4.47	4.1	0.004	0.77	0.0	0.04	12.90	0.01	2.222	2.88	0.04	5.2	94.7	0.1	-0.37	0.43	0.53	—	4.1	0.003	0.66	0.0	0.04	13.64	0.00	2.358	9.71	0.04	4.2	95.7	0.0	0.56	0.65	0.47	0.63	—	65548	8388	32	0	0	0	0	logfile
✔	8ZHN	60109	2024-11-19	2024-05-11	4.12	4.26	4.04	3.8	0.003	0.65	0.0	0.05	12.78	0.01	2.211	6.61	0.66	4.0	96.0	0.0	-1.31	0.71	0.65	—	3.9	0.006	0.79	0.0	0.05	12.69	0.01	2.317	15.74	0.00	7.3	92.7	0.0	-1.29	1.68	0.75	0.77	—	45273	5829	30	0	57	0	0	logfile
✔	9BRU	44844	2024-06-27	2024-05-11	4.4	3.70	4.47	4.1	0.004	0.77	0.0	0.04	12.90	0.01	2.222	2.88	0.04	5.2	94.7	0.1	-0.37	0.43	0.53	—	3.8	0.003	0.66	0.0	0.04	13.73	0.00	2.019	12.53	0.07	4.8	95.2	0.0	0.49	0.67	0.48	0.66	—	65548	8388	32	0	0	0	0	logfile
✔	9BRA	44839	2024-10-13	2024-05-11	4.3	4.67	4.38	4.3	0.005	0.81	1.0	0.05	13.34	0.01	2.297	4.23	0.10	5.2	94.8	0.0	-0.52	0.70	0.71	—	4.3	0.003	0.70	0.0	0.04	13.73	0.00	2.331	13.66	0.01	4.4	95.6	0.0	0.60	1.26	0.72	0.80	—	66852	8554	33	0	0	0	0	logfile
✔	9BRS	44842	2024-12-31	2024-05-11	4.4	3.80	4.47	4.0	0.005	0.81	1.0	0.05	12.95	0.01	2.234	3.89	0.09	5.9	94.0	0.1	-0.74	0.47	0.56	—	4.0	0.003	0.70	0.0	0.04	13.61	0.00	2.320	12.94	0.03	4.8	95.2	0.0	0.31	0.67	0.51	0.66	—	65548	8388	32	0	0	0	0	logfile
✔	9BRU	44844	2024-09-27	2024-05-11	4.4	3.70	4.47	4.1	0.004	0.77	0.0	0.04	12.90	0.01	2.222	2.88	0.04	5.2	94.7	0.1	-0.37	0.43	0.53	—	4.1	0.003	0.66	0.0	0.04	13.73	0.00	2.341	10.44	0.06	4.5	95.5	0.0	0.37	0.66	0.48	0.63	—	65548	8388	32	0	0	0	0	logfile
✔	9BRA	44839	2024-12-31	2024-05-11	4.3	4.67	4.38	4.3	0.005	0.81	1.0	0.05	13.34	0.01	2.297	4.23	0.10	5.2	94.8	0.0	-0.52	0.70	0.71	—	4.3	0.003	0.70	0.0	0.04	13.73	0.00	2.331	13.66	0.01	4.4	95.6	0.0	0.60	1.26	0.72	0.80	—	66852	8554	33	0	0	0	0	logfile
✔	9BRU	44844	2024-12-31	2024-05-11	4.4	3.70	4.47	4.1	0.004	0.77	0.0	0.04	12.90	0.01	2.222	2.88	0.04	5.2	94.7	0.1	-0.37	0.43	0.53	—	4.1	0.003	0.66	0.0	0.04	13.64	0.00	2.358	9.71	0.04	4.2	95.7	0.0	0.56	0.65	0.47	0.63	—	65548	8388	32	0	0	0	0	logfile
✘	9BRS	44842	2025-01-20	2024-05-11	4.4	3.80	4.47	4.0	0.005	0.81	1.0	0.05	12.95	0.01	2.234	3.89	0.09	5.9	94.0	0.1	-0.74	0.47	0.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	65548	8388	32	0	0	0	0	logfile
✔	9BRS	44842	2024-10-13	2024-05-11	4.4	3.80	4.47	4.0	0.005	0.81	1.0	0.05	12.95	0.01	2.234	3.89	0.09	5.9	94.0	0.1	-0.74	0.47	0.56	—	4.0	0.003	0.70	0.0	0.04	13.61	0.00	2.320	12.94	0.03	4.8	95.2	0.0	0.31	0.67	0.51	0.66	—	65548	8388	32	0	0	0	0	logfile
✔	9BRA	44839	2025-01-21	2024-05-11	4.3	4.67	4.38	4.3	0.005	0.81	1.0	0.05	13.34	0.01	2.297	4.23	0.10	5.2	94.8	0.0	-0.52	0.70	0.71	—	4.3	0.004	0.71	0.0	0.04	13.73	0.00	2.324	14.85	0.00	4.6	95.4	0.0	0.47	1.26	0.73	0.81	—	66852	8554	33	0	0	0	0	logfile
✔	9BRA	44839	2024-09-27	2024-05-11	4.3	4.67	4.38	4.3	0.005	0.81	1.0	0.05	13.34	0.01	2.297	4.23	0.10	5.2	94.8	0.0	-0.52	0.70	0.71	—	4.3	0.004	0.73	0.0	0.04	13.79	0.00	2.345	15.74	0.00	5.1	94.9	0.0	0.38	1.26	0.73	0.81	—	66852	8554	33	0	0	0	0	logfile
✘	9BRR	44841	2025-01-20	2024-05-11	4.5	3.78	4.55	4.0	0.005	0.84	3.0	0.05	12.84	0.01	2.279	3.84	0.42	5.0	94.7	0.4	0.03	0.48	0.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	65594	8393	32	0	0	0	0	logfile

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