Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9J3X	61127	2025-04-29	2024-08-08	3.3	3.57	3.36	3.7	0.007	1.12	2.0	0.06	20.91	0.01	2.249	5.47	1.67	2.4	97.4	0.2	-1.58	0.56	0.73	1.78	3.7	0.003	0.72	0.0	0.04	17.66	0.00	2.334	9.20	2.86	2.6	97.2	0.2	2.50	0.85	0.58	0.76	1.63	8894	1156	4	0	10	0	0	logfile
✔	9J3X	61127	2025-06-07	2024-08-08	3.3	3.57	3.36	3.7	0.007	1.12	2.0	0.06	20.91	0.01	2.249	5.47	1.67	2.4	97.4	0.2	-1.58	0.56	0.73	1.78	3.7	0.003	0.72	0.0	0.04	17.66	0.00	2.334	9.20	2.86	2.6	97.2	0.2	2.50	0.85	0.58	0.76	1.63	8894	1156	4	0	10	0	0	logfile
✔	9J3J	61117	2025-06-05	2024-08-08	2.83	3.29	2.87	3.2	0.004	0.73	1.0	0.04	12.62	0.01	2.222	10.47	0.00	3.9	96.1	0.0	-0.36	0.49	0.81	3.49	3.2	0.003	0.60	0.0	0.04	15.82	0.00	2.567	7.88	1.56	3.5	96.5	0.0	1.99	0.41	0.49	0.81	2.61	4779	612	2	0	0	0	0	logfile
✔	9J3J	61117	2025-05-10	2024-08-08	2.83	3.29	2.87	3.2	0.004	0.73	1.0	0.04	12.62	0.01	2.222	10.47	0.00	3.9	96.1	0.0	-0.36	0.49	0.81	3.49	3.2	0.003	0.60	0.0	0.04	15.73	0.00	2.567	7.46	1.56	3.8	96.2	0.0	1.89	0.40	0.49	0.81	2.71	4779	612	2	0	0	0	0	logfile
✔	9J3J	61117	2025-04-27	2024-08-08	2.83	3.29	2.87	3.2	0.004	0.73	1.0	0.04	12.62	0.01	2.222	10.47	0.00	3.9	96.1	0.0	-0.36	0.49	0.81	3.49	3.2	0.003	0.60	0.0	0.04	15.82	0.00	2.567	7.88	1.56	3.5	96.5	0.0	1.99	0.41	0.49	0.81	2.61	4779	612	2	0	0	0	0	logfile
✔	9J38	61109	2025-06-13	2024-08-08	2.4	2.68	2.39	2.8	0.002	0.53	0.0	0.04	14.76	0.00	2.256	9.05	1.71	1.0	99.0	0.0	2.17	0.60	0.76	1.75	2.6	0.005	0.63	0.0	0.04	16.13	0.00	2.588	9.17	2.32	0.9	99.1	0.0	2.10	0.58	0.61	0.80	2.32	15596	1952	8	0	0	0	0	logfile
✔	9GF8	51311	2025-06-06	2024-08-08	3.5	2.86	3.52	3.8	0.002	0.42	0.0	0.04	10.77	0.00	2.210	4.44	0.96	3.0	97.0	0.0	0.32	0.63	0.66	1.43	3.8	0.004	0.56	0.0	0.04	15.26	0.00	2.373	6.21	4.08	3.6	96.4	0.0	0.32	1.10	0.65	0.72	1.37	7893	508	2	0	0	0	3965	logfile
✔	9J38	61109	2025-05-17	2024-08-08	2.4	2.68	2.39	2.8	0.002	0.53	0.0	0.04	14.76	0.00	2.256	9.05	1.71	1.0	99.0	0.0	2.17	0.60	0.76	1.75	2.6	0.006	0.65	0.0	0.04	16.16	0.00	2.584	9.37	2.13	1.0	99.0	0.0	1.97	0.61	0.61	0.80	2.39	15596	1952	8	0	0	0	0	logfile
✔	9J3o	61121	2025-04-27	2024-08-08	2.9	3.44	2.98	3.3	0.005	0.81	0.0	0.04	12.36	0.00	2.210	16.49	0.78	7.7	92.3	0.0	-3.34	0.41	0.73	3.90	3.3	0.004	0.71	0.0	0.04	15.97	0.00	2.567	8.85	3.12	6.7	93.3	0.0	-0.62	1.02	0.41	0.73	2.77	4845	617	2	0	0	0	0	logfile
✔	9J3o	61121	2025-06-05	2024-08-08	2.9	3.44	2.98	3.3	0.005	0.81	0.0	0.04	12.36	0.00	2.210	16.49	0.78	7.7	92.3	0.0	-3.34	0.41	0.73	3.90	3.3	0.004	0.71	0.0	0.04	15.97	0.00	2.567	8.85	3.12	6.7	93.3	0.0	-0.62	1.02	0.41	0.73	2.77	4845	617	2	0	0	0	0	logfile
✔	9J3o	61121	2025-05-10	2024-08-08	2.9	3.44	2.98	3.3	0.005	0.81	0.0	0.04	12.36	0.00	2.210	16.49	0.78	7.7	92.3	0.0	-3.34	0.41	0.73	3.90	3.3	0.004	0.71	0.0	0.04	15.69	0.00	2.573	9.46	2.92	6.5	93.5	0.0	-0.71	1.02	0.41	0.74	2.67	4845	617	2	0	0	0	0	logfile
✘	9D2i	46497	2025-06-07	2024-08-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9053	1010	6	50	2	0	0	logfile
✘	9D2i	46497	2025-04-30	2024-08-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9053	1010	6	50	2	0	0	logfile
✘	9D2i	46497	2025-05-12	2024-08-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9053	1010	6	50	2	0	0	logfile
✔	9J3L	61118	2025-05-10	2024-08-08	2.72	3.06	2.76	2.9	0.004	0.79	0.0	0.04	13.03	0.01	2.234	10.05	0.40	5.2	94.8	0.0	-1.92	0.57	0.83	4.28	3.0	0.003	0.64	0.0	0.04	15.17	0.00	2.570	8.38	1.38	4.0	96.0	0.0	0.75	0.38	0.57	0.83	4.35	4730	602	3	0	1	0	0	logfile
✔	9J3M	61119	2025-04-27	2024-08-08	2.77	3.11	2.78	3.0	0.005	0.76	0.0	0.04	12.77	0.01	2.196	11.06	0.00	3.5	96.5	0.0	-2.56	0.51	0.80	3.68	3.0	0.004	0.69	0.0	0.05	15.13	0.00	2.449	8.00	2.19	2.2	97.8	0.0	1.24	0.38	0.53	0.81	3.51	4700	599	3	0	2	0	0	logfile
✔	9J3M	61119	2025-05-10	2024-08-08	2.77	3.11	2.78	3.0	0.005	0.76	0.0	0.04	12.77	0.01	2.196	11.06	0.00	3.5	96.5	0.0	-2.56	0.51	0.80	3.68	3.0	0.003	0.66	0.0	0.04	15.31	0.00	2.476	8.43	2.59	2.2	97.8	0.0	1.17	0.38	0.53	0.81	3.33	4700	599	3	0	2	0	0	logfile
✔	9J3M	61119	2025-06-05	2024-08-08	2.77	3.11	2.78	3.0	0.005	0.76	0.0	0.04	12.77	0.01	2.196	11.06	0.00	3.5	96.5	0.0	-2.56	0.51	0.80	3.68	3.0	0.004	0.69	0.0	0.05	15.13	0.00	2.449	8.00	2.19	2.2	97.8	0.0	1.24	0.38	0.53	0.81	3.51	4700	599	3	0	2	0	0	logfile
✔	9J3Z	61128	2025-06-07	2024-08-08	3.5	3.74	3.56	3.8	0.005	1.14	0.0	0.06	21.17	0.01	2.187	7.41	0.77	3.1	96.7	0.3	-1.36	0.58	0.75	1.24	3.8	0.004	0.82	0.0	0.05	17.58	0.00	2.378	11.44	3.47	3.5	96.2	0.3	2.13	0.54	0.58	0.75	1.36	8491	1146	4	0	6	0	0	logfile
✔	9J40	61129	2025-04-30	2024-08-08	3.4	3.62	3.40	3.7	0.009	1.37	1.0	0.06	19.90	0.01	2.278	4.65	0.68	7.6	92.2	0.2	1.49	0.60	0.76	1.80	3.7	0.005	0.76	0.0	0.04	17.98	0.01	2.566	7.76	3.49	3.8	95.9	0.4	1.85	1.20	0.63	0.78	1.16	9050	1152	4	0	12	0	0	logfile

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