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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9FAB | 50271 | 2024-11-15 | 2024-05-10 | 3.9 | 3.54 | 3.80 | 3.6 | 0.010 | 1.57 | 0.0 | 0.07 | 11.24 | 0.01 | 2.042 | 7.97 | 0.00 | 1.7 | 98.3 | 0.0 | -4.50 | 0.44 | 0.68 | 2.55 | 3.7 | 0.003 | 0.68 | 0.0 | 0.05 | 14.74 | 0.00 | 2.507 | 6.81 | 2.68 | 9.4 | 90.6 | 0.0 | -5.27 | 1.34 | 0.45 | 0.70 | 2.06 | 8595 | 585 | 10 | 0 | 5 | 0 | 4190 | logfile |
✔ | 8ZH8 | 60096 | 2024-09-25 | 2024-05-10 | 3.19 | 3.97 | 3.21 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 12.78 | 0.00 | 2.207 | 11.98 | 0.10 | 2.9 | 97.1 | 0.0 | 0.57 | 0.68 | 0.68 | 1.06 | 3.7 | 0.003 | 0.80 | 0.0 | 0.04 | 16.31 | 0.00 | 2.441 | 13.40 | 2.30 | 3.7 | 96.3 | 0.0 | 0.51 | 0.97 | 0.70 | 0.76 | 0.76 | 10048 | 1316 | 8 | 0 | 1 | 0 | 0 | logfile |
✔ | 8ZHG | 60102 | 2025-02-11 | 2024-05-10 | 3.51 | 3.69 | 3.44 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 17.55 | 0.01 | 2.273 | 4.79 | 1.11 | 4.3 | 95.7 | 0.0 | -1.47 | 0.61 | 0.72 | 1.21 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 17.66 | 0.00 | 2.459 | 8.50 | 4.71 | 6.4 | 93.6 | 0.0 | -1.38 | 1.98 | 0.65 | 0.79 | 1.53 | 3326 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8ZHG | 60102 | 2025-01-14 | 2024-05-10 | 3.51 | 3.69 | 3.44 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 17.55 | 0.01 | 2.273 | 4.79 | 1.11 | 4.3 | 95.7 | 0.0 | -1.47 | 0.61 | 0.72 | 1.21 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 17.66 | 0.00 | 2.459 | 8.50 | 4.71 | 6.4 | 93.6 | 0.0 | -1.38 | 1.98 | 0.65 | 0.79 | 1.53 | 3326 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 8ZHG | 60102 | 2025-03-06 | 2024-05-10 | 3.51 | 3.69 | 3.43 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 17.55 | 0.01 | 2.273 | 4.79 | 1.11 | 4.3 | 95.7 | 0.0 | -1.47 | 0.61 | 0.72 | 1.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3326 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8ZHG | 60102 | 2024-09-23 | 2024-05-10 | 3.51 | 3.69 | 3.44 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 17.55 | 0.01 | 2.273 | 4.79 | 1.11 | 4.3 | 95.7 | 0.0 | -1.47 | 0.61 | 0.72 | 1.21 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 17.36 | 0.00 | 2.563 | 6.18 | 4.99 | 4.3 | 95.7 | 0.0 | -0.90 | 1.97 | 0.64 | 0.77 | 1.26 | 3326 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 9FAB | 50271 | 2025-02-13 | 2024-05-10 | 3.9 | 3.54 | 3.80 | 3.6 | 0.010 | 1.57 | 0.0 | 0.07 | 11.24 | 0.01 | 2.042 | 7.97 | 0.00 | 1.7 | 98.3 | 0.0 | -4.50 | 0.44 | 0.68 | 2.55 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 14.49 | 0.00 | 2.536 | 5.08 | 2.27 | 7.7 | 92.3 | 0.0 | -4.95 | 1.31 | 0.46 | 0.70 | 2.17 | 8595 | 585 | 10 | 0 | 5 | 0 | 4190 | logfile |
✔ | 8ZH8 | 60096 | 2024-10-11 | 2024-05-10 | 3.19 | 3.97 | 3.21 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 12.78 | 0.00 | 2.207 | 11.98 | 0.10 | 2.9 | 97.1 | 0.0 | 0.57 | 0.68 | 0.68 | 1.06 | 3.7 | 0.003 | 0.80 | 0.0 | 0.04 | 16.31 | 0.00 | 2.441 | 13.40 | 2.30 | 3.7 | 96.3 | 0.0 | 0.51 | 0.97 | 0.70 | 0.76 | 0.76 | 10048 | 1316 | 8 | 0 | 1 | 0 | 0 | logfile |
✔ | 8ZHG | 60102 | 2024-10-09 | 2024-05-10 | 3.51 | 3.69 | 3.44 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 17.55 | 0.01 | 2.273 | 4.79 | 1.11 | 4.3 | 95.7 | 0.0 | -1.47 | 0.61 | 0.72 | 1.21 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 17.36 | 0.00 | 2.563 | 6.18 | 4.99 | 4.3 | 95.7 | 0.0 | -0.90 | 1.97 | 0.64 | 0.77 | 1.26 | 3326 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 9FAC | 50272 | 2025-01-15 | 2024-05-10 | 3.9 | 3.38 | 3.90 | 4.3 | 0.007 | 1.17 | 0.0 | 0.07 | 11.94 | 0.01 | 2.226 | 11.78 | 0.00 | 3.8 | 96.2 | 0.0 | -4.35 | 0.47 | 0.63 | 2.06 | 3.8 | 0.006 | 1.19 | 1.0 | 0.06 | 15.20 | 0.01 | 2.413 | 12.24 | 2.68 | 8.2 | 91.7 | 0.2 | -4.20 | 1.96 | 0.48 | 0.66 | 1.70 | 8595 | 585 | 10 | 0 | 5 | 0 | 4190 | logfile |
✔ | 8ZHE | 60100 | 2024-12-26 | 2024-05-10 | 3.16 | 3.71 | 3.15 | 3.4 | 0.003 | 0.64 | 0.0 | 0.05 | 15.44 | 0.00 | 1.931 | 6.01 | 0.72 | 4.2 | 95.8 | 0.0 | -1.05 | 0.80 | 0.71 | 0.95 | 3.4 | 0.005 | 0.79 | 1.0 | 0.05 | 15.44 | 0.00 | 2.274 | 8.33 | 2.78 | 5.8 | 94.2 | 0.0 | -0.79 | 0.88 | 0.85 | 0.84 | 1.97 | 35541 | 4503 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 9FAA | 50270 | 2024-12-28 | 2024-05-10 | 3.6 | 3.34 | 3.60 | 3.9 | 0.010 | 1.10 | 0.0 | 0.05 | 11.73 | 0.01 | 2.020 | 10.96 | 0.00 | 1.7 | 98.3 | 0.0 | -4.21 | 0.52 | 0.75 | 3.32 | 3.9 | 0.003 | 0.66 | 0.0 | 0.05 | 13.28 | 0.00 | 2.471 | 6.73 | 1.84 | 6.2 | 93.8 | 0.0 | -4.00 | 1.11 | 0.52 | 0.75 | 2.81 | 8695 | 590 | 10 | 0 | 5 | 0 | 4235 | logfile |
✔ | 9FAB | 50271 | 2025-03-13 | 2024-05-10 | 3.9 | 3.54 | 3.78 | 3.6 | 0.010 | 1.57 | 0.0 | 0.07 | 11.24 | 0.01 | 2.531 | 7.97 | 0.00 | 1.7 | 98.3 | 0.0 | -4.50 | 0.44 | 0.68 | 2.55 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 14.66 | 0.00 | 2.505 | 6.47 | 2.47 | 9.7 | 90.3 | 0.0 | -5.05 | 1.34 | 0.46 | 0.70 | 2.23 | 8595 | 585 | 10 | 0 | 5 | 0 | 4190 | logfile |
✔ | 9FAC | 50272 | 2025-03-13 | 2024-05-10 | 3.9 | 3.38 | 3.96 | 4.3 | 0.007 | 1.17 | 0.0 | 0.07 | 11.94 | 0.01 | 2.226 | 11.78 | 0.00 | 3.8 | 96.2 | 0.0 | -4.35 | 0.47 | 0.63 | 2.06 | 3.8 | 0.003 | 0.64 | 0.0 | 0.05 | 15.25 | 0.01 | 2.457 | 9.82 | 2.68 | 6.6 | 93.4 | 0.0 | -4.08 | 1.97 | 0.47 | 0.65 | 1.70 | 8595 | 585 | 10 | 0 | 5 | 0 | 4190 | logfile |
✔ | 8ZGS | 60089 | 2024-10-11 | 2024-05-09 | 3.04 | 3.27 | 3.08 | 3.3 | 0.007 | 0.75 | 0.0 | 0.05 | 18.16 | 0.01 | 2.217 | 6.51 | 0.61 | 4.3 | 95.7 | 0.0 | 0.87 | 0.62 | 0.79 | 2.99 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 17.12 | 0.00 | 2.434 | 3.42 | 3.94 | 4.3 | 95.7 | 0.0 | 1.36 | 0.33 | 0.65 | 0.82 | 2.69 | 8915 | 1077 | 13 | 0 | 14 | 0 | 0 | logfile |
✔ | 8ZGS | 60089 | 2024-11-15 | 2024-05-09 | 3.04 | 3.27 | 3.08 | 3.3 | 0.007 | 0.75 | 0.0 | 0.05 | 18.16 | 0.01 | 2.217 | 6.51 | 0.61 | 4.3 | 95.7 | 0.0 | 0.87 | 0.62 | 0.79 | 2.99 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 17.12 | 0.00 | 2.434 | 3.42 | 3.94 | 4.3 | 95.7 | 0.0 | 1.36 | 0.33 | 0.65 | 0.82 | 2.69 | 8915 | 1077 | 13 | 0 | 14 | 0 | 0 | logfile |
✘ | 9F9Y | 50263 | 2025-01-26 | 2024-05-09 | 2.8 | 3.34 | 2.80 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 10.39 | 0.00 | 2.261 | 5.28 | 0.52 | 2.3 | 97.7 | 0.0 | 0.45 | 0.82 | 0.90 | 3.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24810 | 3078 | 15 | 0 | 57 | 0 | 0 | logfile |
✔ | 9F9Y | 50263 | 2024-09-30 | 2024-05-09 | 2.8 | 3.34 | 2.80 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 10.39 | 0.00 | 2.261 | 5.28 | 0.52 | 2.3 | 97.7 | 0.0 | 0.45 | 0.82 | 0.90 | 3.88 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 12.09 | 0.00 | 2.567 | 5.34 | 1.31 | 2.3 | 97.7 | 0.0 | 0.56 | 0.39 | 0.82 | 0.90 | 3.31 | 24810 | 3078 | 15 | 0 | 57 | 0 | 0 | logfile |
✔ | 8ZGS | 60089 | 2025-03-13 | 2024-05-09 | 3.04 | 3.27 | 3.07 | 3.3 | 0.007 | 0.75 | 0.0 | 0.05 | 18.16 | 0.01 | 2.217 | 6.51 | 0.61 | 4.3 | 95.7 | 0.0 | 0.87 | 0.62 | 0.79 | 2.99 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 17.06 | 0.00 | 2.440 | 4.38 | 2.22 | 3.9 | 96.1 | 0.0 | 1.42 | 0.33 | 0.63 | 0.81 | 2.82 | 8915 | 1077 | 13 | 0 | 14 | 0 | 0 | logfile |
✔ | 8ZGS | 60089 | 2024-08-03 | 2024-05-09 | 3.04 | 3.27 | 3.08 | 3.3 | 0.007 | 0.75 | 0.0 | 0.05 | 18.16 | 0.01 | 2.217 | 6.51 | 0.61 | 4.3 | 95.7 | 0.0 | 0.87 | 0.62 | 0.79 | 2.99 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 17.12 | 0.00 | 2.434 | 3.42 | 3.94 | 4.3 | 95.7 | 0.0 | 1.36 | 0.33 | 0.65 | 0.82 | 2.69 | 8915 | 1077 | 13 | 0 | 14 | 0 | 0 | logfile |