Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8X5D	38066	2025-05-19	2023-11-17	3.1	3.23	3.05	3.2	0.004	0.65	0.0	0.04	15.44	0.01	2.263	3.62	5.46	4.0	96.0	0.0	-5.02	0.78	0.87	3.03	3.1	0.005	0.68	0.0	0.04	16.53	0.00	2.448	4.68	2.57	4.9	95.1	0.0	-1.17	0.48	0.80	0.90	2.57	18477	2225	13	47	0	0	0	logfile
✔	8X5D	38066	2025-06-16	2023-11-17	3.1	3.23	3.05	3.2	0.004	0.65	0.0	0.04	15.44	0.01	2.263	3.62	5.46	4.0	96.0	0.0	-5.02	0.78	0.87	3.03	3.1	0.006	0.70	0.0	0.05	16.68	0.00	2.500	4.76	3.48	5.4	94.6	0.0	-1.30	0.48	0.80	0.90	2.66	18477	2225	13	47	0	0	0	logfile
✔	8V0L	42860	2025-08-25	2023-11-17	3.0	3.23	3.06	3.2	0.004	0.79	0.0	0.05	14.19	0.01	2.299	2.62	0.00	4.9	95.1	0.0	-1.01	0.67	0.81	2.68	3.3	0.005	0.64	0.0	0.05	15.30	0.00	2.402	4.29	2.04	5.0	95.0	0.0	-0.08	1.13	0.68	0.84	2.88	24849	3105	15	0	45	0	0	logfile
✘	8R5o	18935	2024-11-20	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54473	6680	41	0	3	255	0	logfile
✔	8R5o	18935	2024-12-28	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	1.4	0.003	0.56	0.0	0.04	15.18	0.00	1.964	4.42	1.03	2.9	97.0	0.0	1.14	0.38	0.84	0.87	5.34	54473	6680	41	0	3	255	0	logfile
✔	8R5o	18935	2025-01-16	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	1.4	0.002	0.53	0.0	0.04	15.16	0.00	1.995	4.62	0.86	2.9	97.1	0.0	1.29	0.39	0.83	0.87	5.15	54473	6680	41	0	3	255	0	logfile
✔	8V0o	42863	2025-08-25	2023-11-17	3.3	3.45	3.28	3.5	0.005	0.80	1.0	0.06	14.09	0.01	2.264	2.93	0.00	4.7	95.3	0.1	-1.71	0.69	0.81	3.21	3.5	0.003	0.58	0.0	0.04	14.92	0.00	2.503	3.54	1.26	4.5	95.5	0.0	-0.22	0.33	0.70	0.83	2.83	24879	3105	15	0	48	0	0	logfile
✔	8V0M	42861	2025-05-24	2023-11-17	3.2	3.44	3.28	3.5	0.008	0.97	0.0	0.05	14.11	0.01	1.974	3.26	0.00	5.3	94.7	0.0	-1.63	0.66	0.78	2.37	3.5	0.003	0.72	1.0	0.05	14.83	0.00	2.094	4.13	0.81	4.5	95.5	0.0	-0.53	0.36	0.66	0.80	2.16	24835	3105	15	0	44	0	0	logfile
✔	8V0M	42861	2025-06-21	2023-11-17	3.2	3.44	3.28	3.5	0.008	0.97	0.0	0.05	14.11	0.01	1.974	3.26	0.00	5.3	94.7	0.0	-1.63	0.66	0.78	2.37	3.5	0.002	0.55	0.0	0.04	14.72	0.00	2.432	4.03	0.85	4.1	95.8	0.0	-0.39	0.35	0.65	0.79	2.18	24835	3105	15	0	44	0	0	logfile
✔	8V0M	42861	2025-08-25	2023-11-17	3.2	3.44	3.28	3.5	0.008	0.97	0.0	0.05	14.11	0.01	1.974	3.26	0.00	5.3	94.7	0.0	-1.63	0.66	0.78	2.37	3.5	0.002	0.56	0.0	0.04	14.83	0.00	2.465	3.93	0.78	4.0	96.0	0.0	-0.48	0.37	0.66	0.80	2.17	24835	3105	15	0	44	0	0	logfile
✔	8V0Q	42866	2025-05-24	2023-11-17	3.9	4.16	3.93	4.0	0.004	0.85	0.0	0.06	14.49	0.01	2.279	3.47	0.00	4.7	95.3	0.0	-1.79	0.78	0.79	1.36	4.0	0.003	0.62	0.0	0.04	15.24	0.00	2.470	5.86	1.52	4.5	95.5	0.0	-0.26	1.18	0.79	0.80	1.23	24795	3105	12	0	42	0	0	logfile
✔	8V0Q	42866	2025-06-21	2023-11-17	3.9	4.16	3.93	4.0	0.004	0.85	0.0	0.06	14.49	0.01	2.279	3.47	0.00	4.7	95.3	0.0	-1.79	0.78	0.79	1.36	4.0	0.003	0.63	0.0	0.04	15.29	0.00	2.497	6.08	1.86	4.4	95.6	0.0	-0.35	0.43	0.79	0.80	1.21	24795	3105	12	0	42	0	0	logfile
✔	8V0Q	42866	2025-08-25	2023-11-17	3.9	4.16	3.93	4.0	0.004	0.85	0.0	0.06	14.49	0.01	2.279	3.47	0.00	4.7	95.3	0.0	-1.79	0.78	0.79	1.36	4.0	0.004	0.66	0.0	0.05	15.43	0.00	2.493	7.22	1.67	5.0	94.9	0.0	-0.45	0.46	0.79	0.80	1.18	24795	3105	12	0	42	0	0	logfile
✘	8V0o	42863	2025-01-26	2023-11-17	3.3	3.45	3.42	3.5	0.005	0.77	1.0	0.06	14.09	0.01	2.264	2.93	0.00	4.7	95.3	0.1	-1.71	0.69	0.81	3.21	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24879	3105	15	0	48	0	0	logfile
✔	8V0o	42863	2025-05-24	2023-11-17	3.3	3.45	3.28	3.5	0.005	0.80	1.0	0.06	14.09	0.01	2.264	2.93	0.00	4.7	95.3	0.1	-1.71	0.69	0.81	3.21	3.5	0.003	0.57	0.0	0.04	14.91	0.00	2.491	3.76	1.19	4.5	95.4	0.0	-0.18	0.33	0.70	0.83	2.92	24879	3105	15	0	48	0	0	logfile
✔	8V0o	42863	2025-06-21	2023-11-17	3.3	3.45	3.28	3.5	0.005	0.80	1.0	0.06	14.09	0.01	2.264	2.93	0.00	4.7	95.3	0.1	-1.71	0.69	0.81	3.21	3.5	0.003	0.58	0.0	0.04	14.90	0.00	2.416	3.82	1.37	4.2	95.7	0.0	-0.18	0.33	0.70	0.84	2.87	24879	3105	15	0	48	0	0	logfile
✔	8V0U	42870	2025-06-21	2023-11-17	3.3	3.50	3.28	3.5	0.005	0.77	0.0	0.05	14.48	0.01	2.280	3.18	0.00	4.7	95.2	0.0	-1.64	0.69	0.79	2.64	3.5	0.006	0.64	0.0	0.05	15.40	0.00	2.444	4.59	1.19	5.1	94.9	0.0	-0.53	0.32	0.75	0.85	2.67	24811	3105	12	0	39	0	0	logfile
✔	8V0U	42870	2025-05-24	2023-11-17	3.3	3.50	3.28	3.5	0.005	0.77	0.0	0.05	14.48	0.01	2.280	3.18	0.00	4.7	95.2	0.0	-1.64	0.69	0.79	2.64	3.5	0.005	0.59	0.0	0.05	15.29	0.00	2.494	4.18	1.04	4.7	95.3	0.0	-0.44	0.32	0.73	0.84	2.69	24811	3105	12	0	39	0	0	logfile
✔	8V0U	42870	2025-08-25	2023-11-17	3.3	3.50	3.28	3.5	0.005	0.77	0.0	0.05	14.48	0.01	2.280	3.18	0.00	4.7	95.2	0.0	-1.64	0.69	0.79	2.64	3.5	0.003	0.53	0.0	0.04	15.20	0.00	2.501	4.06	1.19	3.9	96.1	0.0	-0.24	0.31	0.70	0.81	2.72	24811	3105	12	0	39	0	0	logfile
✘	8X5i	38070	2025-08-24	2023-11-17	3.01	3.31	3.19	3.2	0.007	1.05	0.0	0.06	15.26	0.01	2.113	3.05	0.64	4.8	95.2	0.0	-3.57	0.69	0.85	3.46	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17006	2063	8	0	8	0	0	logfile

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