Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8UDG	42149	2025-05-20	2023-09-28	4.98	6.27	5.62	5.0	0.004	0.65	0.0	0.04	11.43	0.00	2.089	3.07	0.00	2.8	97.1	0.2	-0.18	0.86	0.74	—	5.0	0.003	0.54	0.0	0.04	12.25	0.00	2.271	8.19	0.00	4.5	95.4	0.2	0.33	1.05	0.87	0.77	—	19524	1317	7	0	0	0	9627	logfile
✔	8UDG	42149	2024-10-15	2023-09-28	4.98	6.27	5.10	5.0	0.004	0.65	0.0	0.04	11.43	0.00	2.089	3.07	0.00	2.8	97.1	0.2	-0.18	0.86	0.74	—	5.0	0.003	0.55	0.0	0.04	12.02	0.00	2.224	7.94	0.00	4.6	95.3	0.2	0.19	1.04	0.87	0.76	—	19524	1317	7	0	0	0	9627	logfile
✔	8UDG	42149	2024-11-19	2023-09-28	4.98	6.27	5.10	5.0	0.004	0.65	0.0	0.04	11.43	0.00	2.089	3.07	0.00	2.8	97.1	0.2	-0.18	0.86	0.74	—	5.0	0.003	0.55	0.0	0.04	12.02	0.00	2.224	7.94	0.00	4.6	95.3	0.2	0.19	1.04	0.87	0.76	—	19524	1317	7	0	0	0	9627	logfile
✔	8WKN	37603	2025-01-24	2023-09-28	3.4	3.81	3.44	3.6	0.014	0.67	0.0	0.04	16.08	0.01	2.214	6.49	0.30	4.5	95.4	0.1	0.67	0.88	0.89	1.92	3.6	0.003	0.68	1.0	0.04	16.45	0.00	2.413	4.32	1.44	3.4	96.6	0.0	1.12	0.33	0.88	0.89	1.69	21526	2607	5	0	0	0	0	logfile
✔	8WKN	37603	2025-06-18	2023-09-28	3.4	3.81	3.44	3.6	0.014	0.67	0.0	0.04	16.08	0.01	2.214	6.49	0.30	4.5	95.4	0.1	0.67	0.88	0.89	1.92	3.6	0.002	0.53	0.0	0.04	16.40	0.00	2.442	3.46	1.39	3.6	96.3	0.0	1.25	0.33	0.87	0.89	1.67	21526	2607	5	0	0	0	0	logfile
✔	8WKN	37603	2025-05-21	2023-09-28	3.4	3.81	3.44	3.6	0.014	0.67	0.0	0.04	16.08	0.01	2.214	6.49	0.30	4.5	95.4	0.1	0.67	0.88	0.89	1.92	3.6	0.003	0.68	1.0	0.04	16.45	0.00	2.413	4.32	1.44	3.4	96.6	0.0	1.12	0.33	0.88	0.89	1.69	21526	2607	5	0	0	0	0	logfile
✔	8WKX	37610	2024-11-18	2023-09-28	4.15	4.52	4.17	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.002	0.58	0.0	0.04	14.61	0.00	2.388	8.30	0.00	4.3	95.7	0.0	-0.28	0.50	0.83	0.80	—	16555	1988	2	0	0	0	0	logfile
✔	8WKX	37610	2025-06-14	2023-09-28	4.15	4.52	4.18	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.003	0.61	0.0	0.04	14.61	0.00	2.396	9.64	0.00	4.7	95.3	0.0	-0.41	0.53	0.84	0.81	—	16555	1988	2	0	0	0	0	logfile
✔	8WKT	37607	2025-06-19	2023-09-28	3.86	4.38	3.99	4.0	0.004	0.63	0.0	0.04	18.08	0.00	2.197	9.84	0.62	4.2	95.8	0.0	-0.40	0.87	0.80	1.06	4.0	0.002	0.60	0.0	0.04	18.17	0.00	2.498	7.87	2.02	3.3	96.7	0.0	0.57	0.77	0.88	0.84	1.12	21944	2644	5	0	0	0	0	logfile
✔	8WKX	37610	2024-12-31	2023-09-28	4.15	4.52	4.17	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.002	0.58	0.0	0.04	14.61	0.00	2.388	8.30	0.00	4.3	95.7	0.0	-0.28	0.50	0.83	0.80	—	16555	1988	2	0	0	0	0	logfile
✔	8WKT	37607	2025-01-24	2023-09-28	3.86	4.38	3.99	4.0	0.004	0.63	0.0	0.04	18.08	0.00	2.197	9.84	0.62	4.2	95.8	0.0	-0.40	0.87	0.80	1.06	4.0	0.002	0.60	0.0	0.04	18.16	0.00	2.433	8.17	2.15	3.4	96.6	0.0	0.56	0.78	0.88	0.85	1.26	21944	2644	5	0	0	0	0	logfile
✔	8WKT	37607	2025-05-21	2023-09-28	3.86	4.38	3.99	4.0	0.004	0.63	0.0	0.04	18.08	0.00	2.197	9.84	0.62	4.2	95.8	0.0	-0.40	0.87	0.80	1.06	4.0	0.002	0.60	0.0	0.04	18.16	0.00	2.433	8.17	2.15	3.4	96.6	0.0	0.56	0.78	0.88	0.85	1.26	21944	2644	5	0	0	0	0	logfile
✔	8WKX	37610	2025-01-21	2023-09-28	4.15	4.52	4.17	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.003	0.61	0.0	0.04	14.68	0.00	2.388	10.28	0.00	5.1	94.9	0.0	-0.37	0.53	0.84	0.81	—	16555	1988	2	0	0	0	0	logfile
✔	8WKX	37610	2024-10-14	2023-09-28	4.15	4.52	4.17	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.002	0.58	0.0	0.04	14.61	0.00	2.388	8.30	0.00	4.3	95.7	0.0	-0.28	0.50	0.83	0.80	—	16555	1988	2	0	0	0	0	logfile
✔	8WKX	37610	2025-05-18	2023-09-28	4.15	4.52	4.18	4.2	0.003	0.58	0.0	0.04	14.27	0.00	1.594	11.38	0.05	4.7	95.3	0.0	-0.59	0.83	0.80	—	4.2	0.003	0.61	0.0	0.04	14.68	0.00	2.388	10.28	0.00	5.1	94.9	0.0	-0.37	0.53	0.84	0.81	—	16555	1988	2	0	0	0	0	logfile
✔	8UD9	42148	2024-11-18	2023-09-28	2.04	2.16	2.10	2.1	0.004	0.56	0.0	0.04	16.94	0.00	2.235	2.23	0.15	1.7	98.3	0.0	1.27	0.81	0.90	6.09	2.1	0.008	0.75	0.0	0.05	17.38	0.01	2.376	4.18	1.25	1.7	98.3	0.0	1.40	0.40	0.82	0.91	6.06	49955	6264	58	0	2	1120	0	logfile
✔	8UD9	42148	2024-12-27	2023-09-28	2.04	2.16	2.10	2.1	0.004	0.56	0.0	0.04	16.94	0.00	2.235	2.23	0.15	1.7	98.3	0.0	1.27	0.81	0.90	6.09	2.1	0.008	0.75	0.0	0.05	17.38	0.01	2.376	4.18	1.25	1.7	98.3	0.0	1.40	0.40	0.82	0.91	6.06	49955	6264	58	0	2	1120	0	logfile
✔	8UD9	42148	2024-02-25	2023-09-28	2.04	2.16	2.10	2.1	0.005	0.58	0.0	0.10	17.07	0.00	2.235	2.23	0.15	1.7	98.3	0.0	1.27	0.81	0.90	6.09	2.1	0.003	0.58	0.0	0.04	17.57	0.00	2.164	4.30	1.90	1.5	98.5	0.0	1.57	0.38	0.82	0.90	5.98	49955	6264	58	0	2	1120	0	logfile
✔	8UD9	42148	2025-01-14	2023-09-28	2.04	2.16	2.10	2.1	0.004	0.56	0.0	0.04	16.94	0.00	2.235	2.23	0.15	1.7	98.3	0.0	1.27	0.81	0.90	6.09	2.1	0.005	0.67	0.0	0.05	17.41	0.01	2.427	3.82	1.58	1.5	98.5	0.0	1.35	0.39	0.82	0.90	6.04	49955	6264	58	0	2	1120	0	logfile
✔	8UD9	42148	2024-10-10	2023-09-28	2.04	2.16	2.10	2.1	0.004	0.56	0.0	0.04	16.94	0.00	2.235	2.23	0.15	1.7	98.3	0.0	1.27	0.81	0.90	6.09	2.1	0.008	0.75	0.0	0.05	17.38	0.01	2.376	4.18	1.25	1.7	98.3	0.0	1.40	0.40	0.82	0.91	6.06	49955	6264	58	0	2	1120	0	logfile

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