Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8ZFM	60065	2024-11-18	2024-05-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17120	2060	25	0	30	10	0	logfile
✘	8ZFM	60065	2024-10-14	2024-05-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17120	2060	25	0	30	10	0	logfile
✘	8ZFM	60065	2024-09-27	2024-05-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17120	2060	25	0	30	10	0	logfile
✘	8ZFM	60065	2024-08-06	2024-05-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17120	2060	25	0	30	10	0	logfile
✘	8ZFM	60065	2025-01-21	2024-05-08	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17120	2060	25	0	30	10	0	logfile
✔	8ZFL	60064	2024-11-18	2024-05-08	2.61	2.71	2.56	2.8	0.003	0.51	0.0	0.04	16.53	0.00	2.236	3.12	0.69	2.1	97.9	0.0	1.07	0.69	0.87	4.20	2.8	0.002	0.60	0.0	0.05	16.89	0.00	2.628	2.95	1.71	2.0	98.0	0.0	2.43	0.55	0.73	0.90	4.31	17070	2060	20	0	25	0	0	logfile
✔	9F9P	50258	2024-12-27	2024-05-08	2.25	2.07	2.32	2.2	0.012	1.73	18.0	0.09	16.33	0.02	1.949	2.09	4.39	2.6	97.0	0.4	-1.54	0.83	0.89	6.00	2.1	0.003	0.65	0.0	0.05	16.78	0.00	2.536	2.64	1.35	1.8	98.1	0.0	1.47	0.84	0.80	0.87	5.13	49596	6272	56	0	0	1074	0	logfile
✔	9F9P	50258	2025-01-14	2024-05-08	2.25	2.07	2.32	2.2	0.012	1.73	18.0	0.09	16.33	0.02	1.949	2.09	4.39	2.6	97.0	0.4	-1.54	0.83	0.89	6.00	2.1	0.003	0.68	1.0	0.05	16.88	0.00	2.125	2.84	1.64	1.7	98.3	0.0	1.55	0.52	0.80	0.87	5.14	49596	6272	56	0	0	1074	0	logfile
✔	8ZFZ	60072	2025-03-13	2024-05-08	3.3	3.54	3.33	3.6	0.004	0.72	0.0	0.04	18.50	0.00	2.158	20.94	0.72	7.4	92.5	0.2	-1.00	0.51	0.63	0.59	3.6	0.003	0.70	0.0	0.04	18.52	0.00	2.436	12.81	5.54	7.0	92.8	0.2	-0.73	0.41	0.59	0.69	0.74	9065	1155	5	0	0	0	0	logfile
✔	9F9T	50260	2025-01-14	2024-05-08	2.31	2.10	2.35	2.2	0.014	2.03	68.0	0.10	17.00	0.02	2.135	4.79	5.78	4.0	95.5	0.5	-2.67	0.81	0.87	5.46	2.1	0.004	0.70	0.0	0.05	17.11	0.00	2.446	4.08	2.88	2.1	97.9	0.0	1.00	1.27	0.78	0.85	5.08	49724	6266	56	0	0	1232	0	logfile
✔	9F9T	50260	2024-12-27	2024-05-08	2.31	2.10	2.35	2.2	0.014	2.03	68.0	0.10	17.00	0.02	2.135	4.79	5.78	4.0	95.5	0.5	-2.67	0.81	0.87	5.46	2.1	0.002	0.60	0.0	0.04	17.08	0.00	2.470	4.21	1.68	1.5	98.5	0.0	1.31	1.26	0.77	0.84	4.90	49724	6266	56	0	0	1232	0	logfile
✔	8ZFZ	60072	2025-02-13	2024-05-08	3.3	3.54	3.35	3.6	0.004	0.72	0.0	0.04	18.50	0.00	2.158	20.94	0.72	7.4	92.5	0.2	-1.00	0.51	0.63	0.59	3.6	0.004	0.71	0.0	0.04	18.58	0.00	2.429	14.48	6.77	6.9	92.9	0.2	-0.89	0.42	0.59	0.71	0.74	9065	1155	5	0	0	0	0	logfile
✔	8ZF4	60050	2025-03-05	2024-05-07	3.05	2.37	2.34	2.2	0.006	0.94	0.0	0.05	13.23	0.01	2.290	9.68	0.54	7.4	92.6	0.0	-0.59	0.79	0.77	4.07	2.9	0.004	0.72	0.0	0.04	15.66	0.01	2.467	6.95	1.63	6.7	93.3	0.0	1.06	1.00	0.80	0.79	3.66	2073	288	1	0	0	0	0	logfile
✔	8ZF7	60052	2025-03-05	2024-05-07	3.15	2.41	2.43	2.9	0.007	0.90	1.0	0.06	12.64	0.01	2.300	9.64	0.54	6.0	94.0	0.0	-0.35	0.72	0.77	2.96	2.9	0.004	0.74	0.0	0.04	14.80	0.01	2.598	5.44	0.00	4.9	95.1	0.0	1.64	0.46	0.73	0.79	1.99	2076	288	1	0	0	0	0	logfile
✘	8ZFE	60058	2025-03-05	2024-05-07	2.56	2.41	2.34	2.2	0.008	0.76	1.0	0.06	12.27	0.01	2.278	10.52	0.48	8.2	91.8	0.0	-2.16	0.80	0.80	3.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2198	293	1	0	0	0	0	logfile
✔	8ZFC	60056	2025-03-13	2024-05-07	2.68	2.47	2.60	2.2	0.006	0.74	2.0	0.05	12.45	0.00	2.051	7.63	0.12	5.6	94.4	0.0	-0.79	0.81	0.79	4.41	2.2	0.004	0.65	0.0	0.04	15.50	0.00	2.402	5.57	2.61	3.9	96.1	0.0	0.23	0.40	0.84	0.86	3.40	8545	1149	5	0	0	0	0	logfile
✔	8ZFD	60057	2025-03-05	2024-05-07	2.56	2.01	2.33	2.6	0.007	0.98	2.0	0.06	13.01	0.01	2.217	9.64	0.46	9.9	90.1	0.0	-1.61	0.77	0.76	3.98	2.6	0.004	0.68	0.0	0.04	15.71	0.00	2.600	6.88	4.15	5.8	94.2	0.0	0.48	0.43	0.75	0.78	3.64	2231	294	1	0	0	0	0	logfile
✔	9BP6	44762	2024-07-21	2024-05-07	3.1	3.37	3.02	3.3	0.005	0.88	0.0	0.05	16.03	0.01	1.963	3.03	0.14	2.7	97.3	0.0	0.29	0.66	0.75	3.00	3.3	0.003	0.55	0.0	0.04	16.83	0.00	1.986	6.92	2.82	2.1	97.9	0.0	0.81	0.68	0.77	0.84	3.10	13631	1732	8	0	8	0	0	logfile
✔	9BP6	44762	2025-01-19	2024-05-07	3.1	3.37	3.02	3.3	0.005	0.88	0.0	0.05	16.03	0.01	1.963	3.03	0.14	2.7	97.3	0.0	0.29	0.66	0.75	3.00	3.3	0.004	0.61	0.0	0.04	17.21	0.00	1.911	5.73	2.41	2.2	97.8	0.0	0.56	0.71	0.77	0.85	3.12	13631	1732	8	0	8	0	0	logfile
✔	9BP6	44762	2024-06-27	2024-05-07	3.1	3.37	3.02	3.3	0.005	0.88	0.0	0.05	16.03	0.01	1.963	3.03	0.14	2.7	97.3	0.0	0.29	0.66	0.75	3.00	3.3	0.004	0.62	0.0	0.04	16.92	0.00	1.913	7.22	2.89	3.1	96.9	0.0	0.00	0.70	0.75	0.84	3.16	13631	1732	8	0	8	0	0	logfile

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