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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UVT | 42628 | 2025-07-30 | 2023-11-04 | 2.9 | 3.16 | 2.83 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 17.19 | 0.00 | 2.573 | 8.83 | 2.37 | 3.9 | 96.1 | 0.0 | 2.99 | 0.39 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2025-08-23 | 2023-11-04 | 2.9 | 3.16 | 2.83 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 17.09 | 0.00 | 2.589 | 8.55 | 1.48 | 3.9 | 96.1 | 0.0 | 3.39 | 0.38 | 0.60 | 0.80 | 1.74 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-11-16 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-12-30 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2025-05-14 | 2023-11-04 | 2.9 | 3.16 | 2.83 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.004 | 0.57 | 0.0 | 0.04 | 17.17 | 0.00 | 2.575 | 8.79 | 2.51 | 3.8 | 96.2 | 0.0 | 3.02 | 0.39 | 0.67 | 0.84 | 1.83 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-08-23 | 2023-11-04 | 3.0 | 3.23 | 2.97 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.73 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 16.30 | 0.00 | 2.507 | 7.30 | 2.80 | 4.8 | 95.2 | 0.0 | 2.04 | 0.25 | 0.64 | 0.82 | 3.00 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2024-11-16 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 16.38 | 0.00 | 2.449 | 8.77 | 2.80 | 5.1 | 94.9 | 0.0 | 2.21 | 0.25 | 0.64 | 0.82 | 3.00 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2024-12-30 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 16.38 | 0.00 | 2.449 | 8.77 | 2.80 | 5.1 | 94.9 | 0.0 | 2.21 | 0.25 | 0.64 | 0.82 | 3.00 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-07-30 | 2023-11-04 | 3.0 | 3.23 | 2.97 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.34 | 0.00 | 2.531 | 8.36 | 2.58 | 5.1 | 94.9 | 0.0 | 2.41 | 0.26 | 0.64 | 0.82 | 3.01 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-06-10 | 2023-11-04 | 3.0 | 3.23 | 2.97 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.34 | 0.00 | 2.531 | 8.36 | 2.58 | 5.1 | 94.9 | 0.0 | 2.41 | 0.26 | 0.64 | 0.82 | 3.01 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-01-18 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.29 | 0.00 | 2.448 | 8.40 | 2.50 | 5.1 | 94.9 | 0.0 | 2.35 | 0.26 | 0.64 | 0.82 | 2.96 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-05-14 | 2023-11-04 | 3.0 | 3.23 | 2.97 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.29 | 0.00 | 2.448 | 8.40 | 2.50 | 5.1 | 94.9 | 0.0 | 2.35 | 0.26 | 0.64 | 0.82 | 2.96 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8X0G | 37978 | 2025-05-14 | 2023-11-04 | 3.0 | 3.25 | 2.86 | 3.2 | 0.007 | 0.87 | 0.0 | 0.06 | 17.33 | 0.01 | 2.251 | 10.31 | 0.76 | 7.9 | 91.7 | 0.4 | -1.70 | 0.71 | 0.86 | 2.78 | 3.2 | 0.003 | 0.66 | 0.0 | 0.04 | 16.77 | 0.00 | 2.547 | 7.41 | 2.57 | 6.0 | 94.0 | 0.0 | -0.53 | 0.38 | 0.73 | 0.87 | 2.55 | 12129 | 1530 | 6 | 0 | 4 | 31 | 0 | logfile |
✔ | 8X0H | 37979 | 2024-12-30 | 2023-11-04 | 4.1 | 4.27 | 3.91 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.30 | 0.00 | 2.561 | 12.62 | 0.00 | 9.0 | 90.8 | 0.1 | -1.54 | 0.33 | 0.67 | 0.73 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0H | 37979 | 2024-11-17 | 2023-11-04 | 4.1 | 4.27 | 3.91 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.30 | 0.00 | 2.561 | 12.62 | 0.00 | 9.0 | 90.8 | 0.1 | -1.54 | 0.33 | 0.67 | 0.73 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0H | 37979 | 2025-08-23 | 2023-11-04 | 4.1 | 4.27 | 3.92 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 14.25 | 0.00 | 2.528 | 14.98 | 0.07 | 10.6 | 89.3 | 0.1 | -1.68 | 0.33 | 0.68 | 0.74 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0H | 37979 | 2025-07-30 | 2023-11-04 | 4.1 | 4.27 | 3.92 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 14.20 | 0.00 | 2.581 | 11.16 | 0.00 | 8.6 | 91.4 | 0.1 | -1.20 | 0.35 | 0.67 | 0.72 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0H | 37979 | 2025-06-11 | 2023-11-04 | 4.1 | 4.27 | 3.92 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 14.20 | 0.00 | 2.581 | 11.16 | 0.00 | 8.6 | 91.4 | 0.1 | -1.20 | 0.35 | 0.67 | 0.72 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0H | 37979 | 2025-01-18 | 2023-11-04 | 4.1 | 4.27 | 3.91 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 14.99 | 0.00 | 2.051 | 17.13 | 0.00 | 10.8 | 89.1 | 0.1 | -1.72 | 0.68 | 0.74 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.19 | 0.00 | 2.576 | 12.38 | 0.00 | 8.8 | 91.0 | 0.1 | -1.32 | 0.32 | 0.67 | 0.73 | — | 12317 | 1558 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0E | 37976 | 2025-01-18 | 2023-11-04 | 3.4 | 3.82 | 3.30 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 16.10 | 0.01 | 2.191 | 9.40 | 1.29 | 8.0 | 91.8 | 0.2 | -1.21 | 0.72 | 0.84 | 2.10 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.54 | 0.00 | 2.530 | 6.71 | 2.72 | 6.0 | 93.9 | 0.1 | -0.53 | 0.40 | 0.73 | 0.86 | 1.80 | 12086 | 1530 | 4 | 0 | 4 | 0 | 0 | logfile |