Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8WE4	37471	2025-06-13	2023-09-17	2.91	2.35	2.96	2.1	0.006	0.71	0.0	0.05	13.30	0.01	1.872	7.79	0.45	5.9	93.6	0.5	-0.51	0.76	0.76	3.54	2.1	0.003	0.65	0.0	0.04	15.73	0.00	2.007	6.93	1.59	5.6	94.2	0.2	-0.39	0.93	0.78	0.79	2.58	8281	1017	8	0	11	0	0	logfile
✔	8WE4	37471	2025-01-20	2023-09-17	2.91	2.35	2.96	2.1	0.004	0.70	0.0	0.05	13.30	0.01	1.872	7.79	0.45	5.9	93.6	0.5	-0.51	0.76	0.76	3.54	2.1	0.003	0.64	0.0	0.04	15.83	0.00	2.030	7.36	1.13	6.3	93.5	0.2	-0.55	0.94	0.78	0.79	2.49	8281	1017	8	0	11	0	0	logfile
✔	8WE4	37471	2025-05-16	2023-09-17	2.91	2.35	2.96	2.1	0.006	0.71	0.0	0.05	13.30	0.01	1.872	7.79	0.45	5.9	93.6	0.5	-0.51	0.76	0.76	3.54	2.1	0.004	0.68	0.0	0.04	15.89	0.00	1.957	7.67	1.70	6.5	93.3	0.2	-0.54	0.94	0.78	0.79	2.60	8281	1017	8	0	11	0	0	logfile
✔	8WE7	37473	2025-06-18	2023-09-17	3.2	3.60	3.49	3.6	0.004	0.76	1.0	0.04	18.92	0.01	2.198	12.87	0.74	9.9	89.1	1.0	-2.42	0.53	0.76	2.05	3.6	0.003	0.71	0.0	0.04	17.86	0.00	2.276	8.43	3.06	9.1	90.5	0.4	-1.49	0.41	0.57	0.80	1.68	21014	2583	11	0	20	0	0	logfile
✔	8WE7	37473	2025-01-24	2023-09-17	3.2	3.60	3.49	3.6	0.004	0.75	1.0	0.04	18.92	0.01	2.198	12.87	0.74	9.9	89.1	1.0	-2.42	0.53	0.76	2.05	3.6	0.003	0.68	0.0	0.04	17.79	0.00	2.347	7.93	3.06	8.9	90.7	0.4	-1.39	0.42	0.57	0.80	1.61	21014	2583	11	0	20	0	0	logfile
✔	8WE7	37473	2025-05-21	2023-09-17	3.2	3.60	3.49	3.6	0.004	0.76	1.0	0.04	18.92	0.01	2.198	12.87	0.74	9.9	89.1	1.0	-2.42	0.53	0.76	2.05	3.6	0.003	0.71	0.0	0.04	17.85	0.00	2.290	8.27	3.28	9.1	90.6	0.4	-1.48	0.41	0.57	0.80	1.67	21014	2583	11	0	20	0	0	logfile
✔	8WE7	37473	2024-02-18	2023-09-17	3.2	3.60	3.49	3.6	0.004	0.75	1.0	0.04	18.92	0.01	2.198	12.87	0.74	9.9	89.1	1.0	-2.42	0.53	0.76	2.05	3.6	0.003	0.67	0.0	0.04	17.80	0.00	2.188	10.21	3.45	9.8	89.7	0.5	-1.64	0.41	0.57	0.80	1.80	21014	2583	11	0	20	0	0	logfile
✔	8U89	42018	2024-02-14	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.004	0.87	0.0	0.04	16.92	0.00	2.078	10.17	2.54	2.4	97.6	0.0	1.48	1.15	0.68	0.80	1.50	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2025-02-14	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.87	1.0	0.04	16.89	0.00	2.092	7.81	2.36	2.8	97.2	0.1	1.41	1.14	0.68	0.80	1.35	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2024-12-29	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.59	0.0	0.04	16.93	0.00	2.135	7.50	2.27	2.5	97.5	0.0	1.49	1.14	0.68	0.80	1.43	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2024-11-16	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.59	0.0	0.04	16.93	0.00	2.135	7.50	2.27	2.5	97.5	0.0	1.49	1.14	0.68	0.80	1.43	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2024-10-11	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.59	0.0	0.04	16.93	0.00	2.135	7.50	2.27	2.5	97.5	0.0	1.49	1.14	0.68	0.80	1.43	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2025-04-30	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.60	0.0	0.04	16.91	0.00	2.147	7.86	2.63	2.8	97.2	0.0	1.40	1.15	0.68	0.80	1.39	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2025-07-28	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.60	0.0	0.04	16.91	0.00	2.147	7.86	2.63	2.8	97.2	0.0	1.40	1.15	0.68	0.80	1.39	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2025-06-08	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.60	0.0	0.04	16.91	0.00	2.147	7.86	2.63	2.8	97.2	0.0	1.40	1.15	0.68	0.80	1.39	9928	1241	4	0	2	0	0	logfile
✔	8U89	42018	2025-05-13	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.87	1.0	0.04	16.89	0.00	2.092	7.81	2.36	2.8	97.2	0.1	1.41	1.14	0.68	0.80	1.35	9928	1241	4	0	2	0	0	logfile
✔	8WDV	37466	2025-05-24	2023-09-16	2.24	2.37	2.20	2.3	0.022	1.86	0.0	0.06	22.60	0.02	1.372	11.84	1.77	1.8	98.2	0.0	2.38	0.79	0.89	5.99	2.3	0.006	0.65	0.0	0.04	16.70	0.00	1.818	9.18	1.63	1.7	98.3	0.0	2.92	0.89	0.79	0.91	4.99	26261	2585	98	0	111	354	0	logfile
✔	8WDV	37466	2025-06-22	2023-09-16	2.24	2.37	2.20	2.3	0.022	1.86	0.0	0.06	22.60	0.02	1.372	11.84	1.77	1.8	98.2	0.0	2.38	0.79	0.89	5.99	2.3	0.006	0.65	0.0	0.04	16.79	0.00	1.814	9.32	1.63	1.7	98.3	0.0	2.90	0.89	0.79	0.91	5.10	26261	2585	98	0	111	354	0	logfile
✔	8U89	42018	2025-01-16	2023-09-16	3.3	3.66	3.52	3.7	0.003	0.70	0.0	0.04	16.18	0.01	2.091	8.51	0.54	2.4	97.6	0.0	0.98	0.67	0.79	1.47	3.7	0.003	0.87	1.0	0.04	16.89	0.00	2.092	7.81	2.36	2.8	97.2	0.1	1.41	1.14	0.68	0.80	1.35	9928	1241	4	0	2	0	0	logfile
✔	8QKo	18468	2025-05-19	2023-09-16	3.73	4.47	3.64	4.1	0.003	0.52	0.0	0.03	13.37	0.01	1.736	9.97	3.14	2.7	97.3	0.0	2.37	0.51	0.74	0.50	4.1	0.003	0.70	0.0	0.04	16.33	0.00	2.479	10.05	3.38	2.4	97.6	0.0	2.44	2.58	0.54	0.86	2.21	18492	2268	12	0	0	0	0	logfile

• ← previous
• Page 942 of 5055
• next →