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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9F6N | 50235 | 2025-03-05 | 2024-05-02 | 3.6 | 3.87 | 3.61 | 3.8 | 0.008 | 1.19 | 0.0 | 0.05 | 16.58 | 0.01 | 1.906 | 3.91 | 2.80 | 3.4 | 96.6 | 0.0 | -0.74 | 0.53 | 0.77 | 1.34 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 16.83 | 0.00 | 2.258 | 10.93 | 6.62 | 4.3 | 95.7 | 0.0 | 2.21 | 1.37 | 0.58 | 0.81 | 1.17 | 3652 | 471 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2025-02-14 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.60 | 0.0 | 0.04 | 17.80 | 0.00 | 2.311 | 4.69 | 1.11 | 1.5 | 98.5 | 0.0 | 1.56 | 0.68 | 0.76 | 0.82 | 0.76 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2025-01-16 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.60 | 0.0 | 0.04 | 17.80 | 0.00 | 2.311 | 4.69 | 1.11 | 1.5 | 98.5 | 0.0 | 1.56 | 0.68 | 0.76 | 0.82 | 0.76 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2025-03-14 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 17.83 | 0.00 | 2.309 | 5.06 | 1.21 | 1.7 | 98.3 | 0.0 | 1.63 | 0.68 | 0.76 | 0.82 | 0.70 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2024-09-25 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 17.93 | 0.00 | 2.339 | 4.32 | 1.11 | 1.5 | 98.5 | 0.0 | 1.49 | 0.69 | 0.76 | 0.82 | 0.71 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9BLR | 44674 | 2025-01-22 | 2024-05-01 | 3.38 | 4.09 | 3.39 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 15.97 | 0.01 | 2.364 | 1.03 | 0.20 | 3.1 | 96.9 | 0.0 | -1.18 | 0.79 | 0.81 | 3.13 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.77 | 0.00 | 2.359 | 3.31 | 0.88 | 2.2 | 97.8 | 0.0 | 0.35 | 0.75 | 0.75 | 0.80 | 2.32 | 18237 | 1148 | 10 | 0 | 17 | 0 | 8811 | logfile |
✔ | 9F6L | 50228 | 2024-11-15 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 17.93 | 0.00 | 2.339 | 4.32 | 1.11 | 1.5 | 98.5 | 0.0 | 1.49 | 0.69 | 0.76 | 0.82 | 0.71 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2024-12-29 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 17.93 | 0.00 | 2.339 | 4.32 | 1.11 | 1.5 | 98.5 | 0.0 | 1.49 | 0.69 | 0.76 | 0.82 | 0.71 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6L | 50228 | 2024-10-11 | 2024-05-01 | 3.9 | 4.20 | 3.90 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.41 | 0.01 | 2.141 | 1.48 | 0.00 | 1.9 | 98.1 | 0.0 | -1.02 | 0.75 | 0.80 | 1.37 | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 17.93 | 0.00 | 2.339 | 4.32 | 1.11 | 1.5 | 98.5 | 0.0 | 1.49 | 0.69 | 0.76 | 0.82 | 0.71 | 9639 | 1118 | 4 | 26 | 3 | 0 | 0 | logfile |
✔ | 9F6K | 50227 | 2025-02-14 | 2024-05-01 | 4.2 | 4.50 | 4.10 | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 16.57 | 0.01 | 2.304 | 2.22 | 0.10 | 2.1 | 97.9 | 0.0 | -1.36 | 0.74 | 0.79 | — | 4.3 | 0.003 | 0.62 | 0.0 | 0.04 | 16.38 | 0.00 | 2.400 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 0.96 | 1.65 | 0.76 | 0.81 | — | 9637 | 1118 | 4 | 26 | 1 | 0 | 0 | logfile |
✔ | 9F6K | 50227 | 2025-01-16 | 2024-05-01 | 4.2 | 4.50 | 4.10 | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 16.57 | 0.01 | 2.304 | 2.22 | 0.10 | 2.1 | 97.9 | 0.0 | -1.36 | 0.74 | 0.79 | — | 4.3 | 0.003 | 0.62 | 0.0 | 0.04 | 16.38 | 0.00 | 2.400 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 0.96 | 1.65 | 0.76 | 0.81 | — | 9637 | 1118 | 4 | 26 | 1 | 0 | 0 | logfile |
✔ | 9BLU | 44677 | 2025-03-11 | 2024-05-01 | 3.38 | 3.73 | 3.50 | 3.8 | 0.003 | 0.45 | 0.0 | 0.04 | 18.95 | 0.00 | 2.214 | 6.89 | 3.18 | 2.9 | 97.1 | 0.0 | 1.22 | 0.68 | 0.79 | 1.04 | 3.8 | 0.002 | 0.48 | 0.0 | 0.04 | 19.22 | 0.00 | 2.470 | 5.58 | 3.47 | 3.3 | 96.7 | 0.0 | 1.60 | 0.20 | 0.68 | 0.79 | 1.00 | 6377 | 831 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BLS | 44675 | 2025-03-12 | 2024-05-01 | 2.96 | 3.23 | 3.00 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 19.38 | 0.00 | 2.224 | 8.42 | 3.62 | 5.9 | 94.1 | 0.0 | 0.28 | 0.67 | 0.80 | 2.45 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 19.47 | 0.00 | 2.521 | 7.30 | 3.62 | 5.8 | 94.2 | 0.0 | 0.49 | 0.21 | 0.67 | 0.80 | 2.18 | 7112 | 921 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BLS | 44675 | 2025-02-12 | 2024-05-01 | 2.96 | 3.23 | 3.00 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 19.38 | 0.00 | 2.224 | 8.42 | 3.62 | 5.9 | 94.1 | 0.0 | 0.28 | 0.67 | 0.80 | 2.45 | 3.3 | 0.004 | 0.56 | 0.0 | 0.04 | 19.45 | 0.00 | 2.579 | 7.30 | 3.62 | 5.4 | 94.6 | 0.0 | 0.57 | 0.21 | 0.64 | 0.78 | 2.18 | 7112 | 921 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BLU | 44677 | 2025-02-11 | 2024-05-01 | 3.38 | 3.73 | 3.50 | 3.8 | 0.003 | 0.45 | 0.0 | 0.04 | 18.95 | 0.00 | 2.214 | 6.89 | 3.18 | 2.9 | 97.1 | 0.0 | 1.22 | 0.68 | 0.79 | 1.04 | 3.8 | 0.003 | 0.51 | 0.0 | 0.04 | 19.26 | 0.00 | 2.612 | 5.81 | 2.89 | 3.3 | 96.7 | 0.0 | 1.38 | 0.20 | 0.68 | 0.80 | 1.00 | 6377 | 831 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9F6J | 50226 | 2024-09-25 | 2024-05-01 | 3.9 | 4.11 | 3.87 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.01 | 2.253 | 1.83 | 0.00 | 1.1 | 98.9 | 0.0 | -1.09 | 0.75 | 0.79 | 1.83 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 17.92 | 0.00 | 2.525 | 4.86 | 2.12 | 2.2 | 97.8 | 0.0 | 0.64 | 1.68 | 0.76 | 0.81 | 1.61 | 9751 | 1118 | 4 | 32 | 1 | 0 | 0 | logfile |
✔ | 9F6J | 50226 | 2025-02-14 | 2024-05-01 | 3.9 | 4.11 | 3.87 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.01 | 2.253 | 1.83 | 0.00 | 1.1 | 98.9 | 0.0 | -1.09 | 0.75 | 0.79 | 1.83 | 4.0 | 0.002 | 0.59 | 0.0 | 0.04 | 17.58 | 0.00 | 2.527 | 4.44 | 2.02 | 1.6 | 98.4 | 0.0 | 1.03 | 0.82 | 0.76 | 0.80 | 1.67 | 9751 | 1118 | 4 | 32 | 1 | 0 | 0 | logfile |
✔ | 9F6J | 50226 | 2025-01-16 | 2024-05-01 | 3.9 | 4.11 | 3.87 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.01 | 2.253 | 1.83 | 0.00 | 1.1 | 98.9 | 0.0 | -1.09 | 0.75 | 0.79 | 1.83 | 4.0 | 0.002 | 0.59 | 0.0 | 0.04 | 17.58 | 0.00 | 2.527 | 4.44 | 2.02 | 1.6 | 98.4 | 0.0 | 1.03 | 0.82 | 0.76 | 0.80 | 1.67 | 9751 | 1118 | 4 | 32 | 1 | 0 | 0 | logfile |
✔ | 9F6J | 50226 | 2024-12-29 | 2024-05-01 | 3.9 | 4.11 | 3.87 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.01 | 2.253 | 1.83 | 0.00 | 1.1 | 98.9 | 0.0 | -1.09 | 0.75 | 0.79 | 1.83 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 17.92 | 0.00 | 2.525 | 4.86 | 2.12 | 2.2 | 97.8 | 0.0 | 0.64 | 1.68 | 0.76 | 0.81 | 1.61 | 9751 | 1118 | 4 | 32 | 1 | 0 | 0 | logfile |
✔ | 9F6J | 50226 | 2024-10-11 | 2024-05-01 | 3.9 | 4.11 | 3.87 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.01 | 2.253 | 1.83 | 0.00 | 1.1 | 98.9 | 0.0 | -1.09 | 0.75 | 0.79 | 1.83 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 17.92 | 0.00 | 2.525 | 4.86 | 2.12 | 2.2 | 97.8 | 0.0 | 0.64 | 1.68 | 0.76 | 0.81 | 1.61 | 9751 | 1118 | 4 | 32 | 1 | 0 | 0 | logfile |