Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8WXF	37905	2024-12-31	2023-10-29	4.0	4.27	4.10	4.2	0.003	0.71	0.0	0.05	17.29	0.01	2.188	15.21	0.75	4.8	95.1	0.1	-1.25	0.74	0.80	—	4.2	0.003	0.65	0.0	0.04	17.58	0.00	2.316	11.54	3.81	4.4	95.4	0.1	-0.45	0.37	0.78	0.81	—	16380	2190	3	0	0	0	0	logfile
✔	8WXF	37905	2025-06-14	2023-10-29	4.0	4.27	4.10	4.2	0.003	0.71	0.0	0.05	17.29	0.01	2.188	15.21	0.75	4.8	95.1	0.1	-1.25	0.74	0.80	—	4.2	0.003	0.65	0.0	0.04	17.52	0.00	2.380	11.39	3.46	4.3	95.5	0.1	-0.49	0.37	0.77	0.81	—	16380	2190	3	0	0	0	0	logfile
✔	8WXF	37905	2025-01-21	2023-10-29	4.0	4.27	4.10	4.2	0.003	0.71	0.0	0.05	17.29	0.01	2.188	15.21	0.75	4.8	95.1	0.1	-1.25	0.74	0.80	—	4.2	0.003	0.66	0.0	0.04	17.56	0.00	2.407	11.21	3.29	4.2	95.7	0.1	-0.52	0.98	0.78	0.82	—	16380	2190	3	0	0	0	0	logfile
✔	8WXF	37905	2025-05-18	2023-10-29	4.0	4.27	4.10	4.2	0.003	0.71	0.0	0.05	17.29	0.01	2.188	15.21	0.75	4.8	95.1	0.1	-1.25	0.74	0.80	—	4.2	0.003	0.66	0.0	0.04	17.56	0.00	2.407	11.21	3.29	4.2	95.7	0.1	-0.52	0.98	0.78	0.82	—	16380	2190	3	0	0	0	0	logfile
✔	8WXF	37905	2024-11-18	2023-10-29	4.0	4.27	4.10	4.2	0.003	0.71	0.0	0.05	17.29	0.01	2.188	15.21	0.75	4.8	95.1	0.1	-1.25	0.74	0.80	—	4.2	0.003	0.65	0.0	0.04	17.58	0.00	2.316	11.54	3.81	4.4	95.4	0.1	-0.45	0.37	0.78	0.81	—	16380	2190	3	0	0	0	0	logfile
✔	8QZP	18779	2025-05-24	2023-10-28	4.15	4.36	4.20	4.2	0.005	0.80	0.0	0.04	14.08	0.01	2.205	22.06	1.23	8.0	91.4	0.6	-1.51	0.78	0.75	—	4.2	0.004	0.75	0.0	0.04	13.74	0.01	2.362	16.44	0.04	7.9	92.0	0.1	-0.95	0.45	0.78	0.75	—	25393	3273	8	0	0	0	0	logfile
✔	8QZP	18779	2025-08-25	2023-10-28	4.15	4.36	4.20	4.2	0.005	0.80	0.0	0.04	14.08	0.01	2.205	22.10	1.23	8.0	91.4	0.6	-1.51	0.78	0.75	—	4.2	0.004	0.75	0.0	0.04	13.77	0.01	2.332	15.87	0.00	7.3	92.6	0.1	-0.89	0.48	0.78	0.75	—	25393	3273	8	0	0	0	0	logfile
✔	8QZP	18779	2025-06-21	2023-10-28	4.15	4.36	4.20	4.2	0.005	0.80	0.0	0.04	14.08	0.01	2.205	22.06	1.23	8.0	91.4	0.6	-1.51	0.78	0.75	—	4.2	0.004	0.75	0.0	0.04	13.76	0.01	2.339	16.94	0.00	8.1	91.8	0.1	-1.04	0.45	0.78	0.75	—	25393	3273	8	0	0	0	0	logfile
✔	8USP	42510	2024-11-18	2023-10-28	3.3	4.27	—	4.0	0.003	0.66	8.0	0.04	14.46	0.00	1.875	7.99	0.15	3.0	97.0	0.0	1.03	0.80	0.79	0.78	4.0	0.003	0.65	0.0	0.04	16.28	0.00	2.432	8.21	1.85	3.2	96.8	0.0	1.36	0.46	0.83	0.83	0.99	47406	5892	6	0	0	0	0	logfile
✔	8USP	42510	2025-01-15	2023-10-28	3.3	4.27	—	4.0	0.003	0.66	8.0	0.04	14.46	0.00	1.875	7.99	0.15	3.0	97.0	0.0	1.03	0.80	0.79	0.78	4.0	0.003	0.64	0.0	0.04	16.24	0.00	2.366	7.96	1.68	3.1	96.9	0.0	1.36	1.15	0.83	0.83	1.02	47406	5892	6	0	0	0	0	logfile
✔	8USP	42510	2024-02-25	2023-10-28	3.3	4.27	—	4.0	0.003	0.66	8.0	0.04	14.46	0.00	1.875	7.99	0.15	3.0	97.0	0.0	1.03	0.80	0.79	0.78	4.0	0.003	0.61	0.0	0.04	16.12	0.00	2.153	9.26	1.96	3.0	96.9	0.0	1.38	0.43	0.83	0.83	0.91	47406	5892	6	0	0	0	0	logfile
✔	8USP	42510	2024-12-28	2023-10-28	3.3	4.27	—	4.0	0.003	0.66	8.0	0.04	14.46	0.00	1.875	7.99	0.15	3.0	97.0	0.0	1.03	0.80	0.79	0.78	4.0	0.003	0.65	0.0	0.04	16.28	0.00	2.432	8.21	1.85	3.2	96.8	0.0	1.36	0.46	0.83	0.83	0.99	47406	5892	6	0	0	0	0	logfile
✔	8WXE	37904	2024-11-14	2023-10-28	4.0	4.62	3.94	4.5	0.004	0.86	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.89	0.0	0.04	18.41	0.00	2.476	12.77	8.76	4.8	95.2	0.0	-0.30	0.94	0.56	0.74	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2025-08-22	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.87	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.93	0.0	0.04	18.35	0.00	2.473	12.10	5.30	5.2	94.8	0.0	-0.26	0.95	0.56	0.73	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2025-07-23	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.87	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.88	0.0	0.04	18.32	0.00	2.488	13.23	6.11	5.0	95.0	0.0	-0.27	0.94	0.56	0.73	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2025-06-04	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.87	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.88	0.0	0.04	18.32	0.00	2.488	13.23	6.11	5.0	95.0	0.0	-0.27	0.94	0.56	0.73	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2025-05-10	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.87	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.005	0.93	0.0	0.05	18.38	0.00	2.479	14.13	8.55	5.2	94.8	0.0	-0.48	0.93	0.57	0.74	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2025-04-27	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.87	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.88	0.0	0.04	18.32	0.00	2.488	13.23	6.11	5.0	95.0	0.0	-0.27	0.94	0.56	0.73	—	4388	548	9	0	1	0	0	logfile
✘	8WXE	37904	2025-03-06	2023-10-28	4.0	4.62	3.89	4.5	0.004	0.86	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4388	548	9	0	1	0	0	logfile
✔	8WXE	37904	2024-12-27	2023-10-28	4.0	4.62	3.94	4.5	0.004	0.86	0.0	0.04	18.18	0.01	2.178	19.10	2.04	6.0	94.0	0.0	-0.75	0.55	0.72	—	4.5	0.004	0.89	0.0	0.04	18.41	0.00	2.476	12.77	8.76	4.8	95.2	0.0	-0.30	0.94	0.56	0.74	—	4388	548	9	0	1	0	0	logfile

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