Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8U4K	41885	2024-10-15	2023-09-10	4.27	4.73	4.32	4.3	0.013	1.64	1.0	0.09	16.02	0.02	2.383	1.03	0.19	3.8	96.2	0.0	-0.65	0.87	0.72	—	4.4	0.003	0.68	0.0	0.04	11.86	0.00	2.324	7.40	0.19	5.4	94.6	0.0	-1.63	3.56	0.87	0.75	—	19063	1228	15	0	35	0	9074	logfile
✔	8U4K	41885	2025-06-17	2023-09-10	4.27	4.73	4.31	4.3	0.014	1.77	1.0	0.09	16.02	0.02	2.383	1.03	0.19	3.8	96.2	0.0	-0.65	0.87	0.72	—	4.4	0.002	0.65	0.0	0.04	11.51	0.00	2.313	4.22	0.19	3.9	96.1	0.0	-0.96	3.65	0.87	0.73	—	19063	1228	15	0	35	0	9074	logfile
✔	8U4K	41885	2025-05-20	2023-09-10	4.27	4.73	4.31	4.3	0.014	1.77	1.0	0.09	16.02	0.02	2.383	1.03	0.19	3.8	96.2	0.0	-0.65	0.87	0.72	—	4.4	0.003	0.67	0.0	0.04	11.66	0.00	2.272	5.81	0.19	5.2	94.8	0.0	-1.20	3.65	0.87	0.74	—	19063	1228	15	0	35	0	9074	logfile
✔	8U4K	41885	2025-01-23	2023-09-10	4.27	4.73	4.32	4.3	0.013	1.64	1.0	0.09	16.02	0.02	2.383	1.03	0.19	3.8	96.2	0.0	-0.65	0.87	0.72	—	4.4	0.002	0.63	0.0	0.04	11.63	0.00	2.329	5.66	0.19	4.4	95.6	0.0	-1.12	3.66	0.87	0.74	—	19063	1228	15	0	35	0	9074	logfile
✔	8U4i	41883	2025-06-18	2023-09-10	3.38	3.92	3.47	3.8	0.015	1.66	0.0	0.09	16.96	0.01	2.351	0.62	0.35	2.0	98.0	0.0	-0.39	0.80	0.79	3.08	3.8	0.004	0.66	0.0	0.04	12.35	0.00	2.347	3.95	0.95	5.9	94.1	0.0	-1.33	1.22	0.75	0.75	2.50	20434	1301	20	0	57	0	9593	logfile
✔	8U4i	41883	2025-05-21	2023-09-10	3.38	3.92	3.47	3.8	0.015	1.66	0.0	0.09	16.96	0.01	2.351	0.62	0.35	2.0	98.0	0.0	-0.39	0.80	0.79	3.08	3.8	0.005	0.71	0.0	0.05	12.41	0.00	2.325	4.66	1.13	6.6	93.4	0.0	-1.52	1.22	0.75	0.76	2.43	20434	1301	20	0	57	0	9593	logfile
✔	8U4i	41883	2025-01-24	2023-09-10	3.38	3.92	3.46	3.8	0.014	1.56	0.0	0.09	16.96	0.01	2.351	0.62	0.35	2.0	98.0	0.0	-0.39	0.80	0.79	3.08	3.8	0.005	0.67	0.0	0.05	12.34	0.00	2.334	4.56	0.95	6.5	93.5	0.0	-1.44	1.22	0.75	0.76	2.50	20434	1301	20	0	57	0	9593	logfile
✔	8WBX	37426	2024-12-28	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.17	0.00	2.566	10.96	4.41	2.9	97.1	0.0	1.43	0.57	0.49	0.66	1.19	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-01-14	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.24	0.00	2.562	11.16	4.66	2.9	97.1	0.0	1.22	0.58	0.49	0.66	1.44	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2024-02-13	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.61	0.0	0.04	16.34	0.00	2.228	11.56	5.16	2.7	97.3	0.0	1.44	0.55	0.50	0.66	1.19	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-02-12	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.24	0.00	2.562	11.16	4.66	2.9	97.1	0.0	1.22	0.58	0.49	0.66	1.44	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-03-12	2023-09-10	3.23	3.53	3.24	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.28	0.00	2.563	10.76	4.28	2.9	97.1	0.0	1.25	0.59	0.49	0.66	1.35	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-04-28	2023-09-10	3.23	3.53	3.24	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.28	0.00	2.563	10.76	4.28	2.9	97.1	0.0	1.25	0.59	0.49	0.66	1.35	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-05-11	2023-09-10	3.23	3.53	3.24	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.24	0.00	2.562	11.16	4.66	2.9	97.1	0.0	1.22	0.58	0.49	0.66	1.44	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-06-06	2023-09-10	3.23	3.53	3.24	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.28	0.00	2.563	10.76	4.28	2.9	97.1	0.0	1.25	0.59	0.49	0.66	1.35	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2025-07-25	2023-09-10	3.23	3.53	3.24	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.28	0.00	2.563	10.76	4.28	2.9	97.1	0.0	1.25	0.59	0.49	0.66	1.35	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2024-10-10	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.17	0.00	2.566	10.96	4.41	2.9	97.1	0.0	1.43	0.57	0.49	0.66	1.19	7331	934	3	0	1	0	0	logfile
✔	8WBX	37426	2024-11-14	2023-09-10	3.23	3.53	3.23	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.305	10.08	0.38	1.6	98.4	0.0	1.77	0.48	0.63	1.04	3.5	0.003	0.64	0.0	0.04	16.17	0.00	2.566	10.96	4.41	2.9	97.1	0.0	1.43	0.57	0.49	0.66	1.19	7331	934	3	0	1	0	0	logfile
✔	8WBC	37420	2025-07-28	2023-09-09	3.03	3.32	3.19	3.3	0.003	0.52	0.0	0.04	12.97	0.00	2.129	5.70	0.26	5.0	94.9	0.1	-1.39	0.64	0.85	3.17	3.3	0.004	0.56	0.0	0.04	15.67	0.00	2.551	4.73	1.48	5.0	95.0	0.0	-1.13	0.92	0.63	0.86	2.76	10549	1339	4	0	0	0	0	logfile
✔	8WBC	37420	2024-10-11	2023-09-09	3.03	3.32	3.19	3.3	0.003	0.51	0.0	0.04	12.97	0.00	2.129	5.70	0.26	5.0	94.9	0.1	-1.39	0.64	0.85	3.17	3.3	0.003	0.52	0.0	0.04	15.85	0.00	2.536	3.91	1.83	4.6	95.4	0.0	-1.16	0.92	0.61	0.85	2.71	10549	1339	4	0	0	0	0	logfile

• ← previous
• Page 973 of 5055
• next →