The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WVX | 37875 | 2024-12-29 | 2023-10-24 | 3.32 | 3.54 | 3.32 | 3.5 | 0.022 | 2.06 | 6.0 | 0.07 | 8.64 | 0.01 | 1.179 | 15.41 | 2.48 | 8.0 | 92.0 | 0.0 | -2.44 | 0.56 | 0.55 | 1.51 | 3.5 | 0.003 | 0.73 | 0.0 | 0.04 | 13.83 | 0.00 | 2.371 | 5.23 | 3.15 | 6.0 | 94.0 | 0.1 | -0.23 | 1.49 | 0.69 | 0.77 | 2.26 | 11460 | 1655 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WVX | 37875 | 2024-11-16 | 2023-10-24 | 3.32 | 3.54 | 3.32 | 3.5 | 0.022 | 2.06 | 6.0 | 0.07 | 8.64 | 0.01 | 1.179 | 15.41 | 2.48 | 8.0 | 92.0 | 0.0 | -2.44 | 0.56 | 0.55 | 1.51 | 3.5 | 0.006 | 0.81 | 0.0 | 0.05 | 13.71 | 0.01 | 2.365 | 6.01 | 3.34 | 7.8 | 92.2 | 0.0 | -0.44 | 1.50 | 0.70 | 0.78 | 2.18 | 11460 | 1655 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WVX | 37875 | 2025-08-23 | 2023-10-24 | 3.32 | 3.54 | 3.32 | 3.5 | 0.024 | 2.08 | 6.0 | 0.07 | 8.64 | 0.01 | 1.179 | 15.40 | 2.48 | 8.0 | 92.0 | 0.0 | -2.44 | 0.56 | 0.55 | 1.51 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 13.50 | 0.00 | 2.492 | 5.09 | 3.44 | 5.8 | 94.2 | 0.0 | -0.18 | 1.49 | 0.68 | 0.74 | 2.08 | 11460 | 1655 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WVX | 37875 | 2025-07-29 | 2023-10-24 | 3.32 | 3.54 | 3.32 | 3.5 | 0.024 | 2.08 | 6.0 | 0.07 | 8.64 | 0.01 | 1.179 | 15.41 | 2.48 | 8.0 | 92.0 | 0.0 | -2.44 | 0.56 | 0.55 | 1.51 | 3.5 | 0.003 | 0.73 | 0.0 | 0.04 | 13.57 | 0.00 | 2.478 | 5.41 | 3.34 | 5.8 | 94.2 | 0.0 | -0.23 | 1.49 | 0.69 | 0.78 | 1.96 | 11460 | 1655 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WVU | 37869 | 2025-08-23 | 2023-10-24 | 3.61 | 2.50 | — | 2.3 | 0.014 | 1.35 | 3.0 | 0.06 | 8.44 | 0.01 | 1.989 | 17.48 | 2.68 | 6.0 | 94.0 | 0.0 | -1.23 | 0.71 | 0.62 | 2.88 | 2.2 | 0.004 | 0.72 | 0.0 | 0.04 | 14.38 | 0.01 | 2.529 | 7.96 | 2.07 | 6.8 | 93.2 | 0.0 | -1.28 | 1.86 | 0.75 | 0.73 | 2.65 | 7427 | 972 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WVU | 37869 | 2024-12-28 | 2023-10-24 | 3.61 | 2.50 | — | 2.3 | 0.012 | 1.32 | 3.0 | 0.06 | 8.44 | 0.01 | 1.989 | 17.55 | 2.68 | 6.0 | 94.0 | 0.0 | -1.23 | 0.71 | 0.62 | 2.88 | 2.2 | 0.003 | 0.70 | 0.0 | 0.04 | 14.35 | 0.00 | 2.550 | 7.29 | 2.07 | 6.8 | 93.2 | 0.0 | -1.06 | 1.86 | 0.75 | 0.74 | 2.43 | 7427 | 972 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-08-22 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.09 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 15.79 | 0.00 | 2.597 | 2.40 | 0.87 | 2.5 | 97.5 | 0.0 | 1.31 | 0.31 | 0.64 | 0.81 | 2.53 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2024-12-28 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.70 | 0.00 | 2.596 | 2.40 | 1.11 | 2.5 | 97.5 | 0.0 | 1.48 | 0.34 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2024-11-14 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.70 | 0.00 | 2.596 | 2.40 | 1.11 | 2.5 | 97.5 | 0.0 | 1.48 | 0.34 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-07-25 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-06-06 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-05-11 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-04-28 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-03-12 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-02-12 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-01-15 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-06-05 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 18.69 | 0.00 | 2.601 | 11.65 | 4.98 | 5.0 | 95.0 | 0.0 | -4.79 | 3.43 | 0.54 | 0.77 | 2.72 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-01-14 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.87 | 0.0 | 0.04 | 18.50 | 0.00 | 2.609 | 8.30 | 4.41 | 4.5 | 95.5 | 0.0 | -4.74 | 3.43 | 0.53 | 0.77 | 2.40 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2024-02-13 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 1.26 | 1.0 | 0.04 | 18.38 | 0.00 | 2.084 | 19.76 | 4.41 | 4.1 | 95.9 | 0.0 | -5.05 | 3.44 | 0.53 | 0.77 | 2.41 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-02-11 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.87 | 0.0 | 0.04 | 18.50 | 0.00 | 2.609 | 8.30 | 4.41 | 4.5 | 95.5 | 0.0 | -4.74 | 3.43 | 0.53 | 0.77 | 2.40 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |