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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WV4 | 37864 | 2025-06-06 | 2023-10-23 | 3.3 | 3.25 | 3.30 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.003 | 0.58 | 0.0 | 0.05 | 15.22 | 0.00 | 2.319 | 6.45 | 2.00 | 2.5 | 97.5 | 0.0 | -1.06 | 1.17 | 0.75 | 0.86 | 3.90 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2025-05-11 | 2023-10-23 | 3.3 | 3.25 | 3.30 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.003 | 0.59 | 0.0 | 0.05 | 15.15 | 0.00 | 2.293 | 6.88 | 1.78 | 2.5 | 97.5 | 0.0 | -1.08 | 1.17 | 0.75 | 0.87 | 4.11 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2025-04-28 | 2023-10-23 | 3.3 | 3.25 | 3.30 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.003 | 0.58 | 0.0 | 0.05 | 15.22 | 0.00 | 2.319 | 6.45 | 2.00 | 2.5 | 97.5 | 0.0 | -1.06 | 1.17 | 0.75 | 0.86 | 3.90 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2025-03-12 | 2023-10-23 | 3.3 | 3.25 | 3.30 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.003 | 0.59 | 0.0 | 0.05 | 15.24 | 0.00 | 2.295 | 6.69 | 2.00 | 2.6 | 97.4 | 0.0 | -1.10 | 1.17 | 0.75 | 0.87 | 4.02 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2025-02-12 | 2023-10-23 | 3.3 | 3.25 | 3.29 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.005 | 0.60 | 0.0 | 0.05 | 15.11 | 0.00 | 2.255 | 6.63 | 1.78 | 2.4 | 97.6 | 0.0 | -1.09 | 1.17 | 0.75 | 0.87 | 4.02 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8UQK | 42472 | 2025-08-22 | 2023-10-23 | 4.61 | 6.61 | 4.58 | 5.7 | 0.003 | 0.86 | 0.0 | 0.04 | 13.61 | 0.01 | 2.184 | 21.41 | 0.00 | 6.5 | 93.4 | 0.1 | -2.07 | 0.86 | 0.72 | — | 5.8 | 0.003 | 0.78 | 0.0 | 0.04 | 14.06 | 0.01 | 2.417 | 13.39 | 0.00 | 7.4 | 92.4 | 0.2 | -2.37 | 2.43 | 0.84 | 0.66 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UQK | 42472 | 2025-07-25 | 2023-10-23 | 4.61 | 6.61 | 4.58 | 5.7 | 0.003 | 0.86 | 0.0 | 0.04 | 13.61 | 0.01 | 2.184 | 21.41 | 0.00 | 6.5 | 93.4 | 0.1 | -2.07 | 0.86 | 0.72 | — | 5.8 | 0.003 | 0.77 | 0.0 | 0.04 | 14.06 | 0.01 | 2.520 | 13.80 | 0.00 | 7.2 | 92.6 | 0.2 | -2.36 | 2.43 | 0.84 | 0.67 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2025-01-15 | 2023-10-23 | 3.3 | 3.25 | 3.29 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.005 | 0.60 | 0.0 | 0.05 | 15.11 | 0.00 | 2.255 | 6.63 | 1.78 | 2.4 | 97.6 | 0.0 | -1.09 | 1.17 | 0.75 | 0.87 | 4.02 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8UQK | 42472 | 2025-06-06 | 2023-10-23 | 4.61 | 6.61 | 4.58 | 5.7 | 0.003 | 0.86 | 0.0 | 0.04 | 13.61 | 0.01 | 2.184 | 21.41 | 0.00 | 6.5 | 93.4 | 0.1 | -2.07 | 0.86 | 0.72 | — | 5.8 | 0.003 | 0.77 | 0.0 | 0.04 | 14.06 | 0.01 | 2.520 | 13.80 | 0.00 | 7.2 | 92.6 | 0.2 | -2.36 | 2.43 | 0.84 | 0.67 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UQK | 42472 | 2024-11-14 | 2023-10-23 | 4.61 | 6.61 | 4.59 | 5.7 | 0.003 | 0.86 | 0.0 | 0.04 | 13.61 | 0.01 | 2.184 | 21.41 | 0.00 | 6.5 | 93.4 | 0.1 | -2.07 | 0.86 | 0.72 | — | 5.7 | 0.003 | 0.78 | 0.0 | 0.04 | 14.24 | 0.01 | 2.483 | 13.93 | 0.00 | 7.9 | 91.9 | 0.2 | -2.61 | 2.65 | 0.84 | 0.67 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UQK | 42472 | 2024-12-28 | 2023-10-23 | 4.61 | 6.61 | 4.59 | 5.7 | 0.003 | 0.86 | 0.0 | 0.04 | 13.61 | 0.01 | 2.184 | 21.41 | 0.00 | 6.5 | 93.4 | 0.1 | -2.07 | 0.86 | 0.72 | — | 5.7 | 0.003 | 0.78 | 0.0 | 0.04 | 14.24 | 0.01 | 2.483 | 13.93 | 0.00 | 7.9 | 91.9 | 0.2 | -2.61 | 2.65 | 0.84 | 0.67 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QX8 | 18701 | 2025-08-25 | 2023-10-23 | 4.6 | 4.51 | — | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 13.35 | 0.00 | 2.225 | 8.46 | 0.09 | 9.3 | 90.4 | 0.3 | -0.10 | 0.85 | 0.75 | — | 2.8 | 0.002 | 0.58 | 0.0 | 0.04 | 13.47 | 0.00 | 2.449 | 6.80 | 0.00 | 10.1 | 89.7 | 0.2 | -0.12 | 0.31 | 0.85 | 0.76 | — | 30086 | 4443 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QX8 | 18701 | 2025-06-26 | 2023-10-23 | 4.6 | 4.51 | — | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 13.35 | 0.00 | 2.225 | 8.54 | 0.09 | 9.3 | 90.4 | 0.3 | -0.10 | 0.85 | 0.75 | — | 2.4 | 0.003 | 0.58 | 0.0 | 0.04 | 13.44 | 0.00 | 2.435 | 7.86 | 0.00 | 10.3 | 89.4 | 0.2 | -0.09 | 0.31 | 0.85 | 0.76 | — | 30086 | 4443 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QX8 | 18701 | 2025-05-28 | 2023-10-23 | 4.6 | 4.51 | — | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 13.35 | 0.00 | 2.225 | 8.54 | 0.09 | 9.3 | 90.4 | 0.3 | -0.10 | 0.85 | 0.75 | — | 2.8 | 0.003 | 0.60 | 0.0 | 0.04 | 13.46 | 0.00 | 2.481 | 7.92 | 0.00 | 10.7 | 89.1 | 0.2 | -0.17 | 0.31 | 0.85 | 0.76 | — | 30086 | 4443 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WV4 | 37864 | 2024-11-15 | 2023-10-23 | 3.3 | 3.25 | 3.29 | 3.3 | 0.002 | 0.49 | 0.0 | 0.04 | 14.13 | 0.00 | 1.938 | 5.08 | 3.33 | 1.0 | 99.0 | 0.0 | -2.63 | 0.74 | 0.84 | 4.40 | 3.3 | 0.003 | 0.58 | 0.0 | 0.05 | 15.18 | 0.00 | 2.321 | 6.26 | 1.78 | 2.2 | 97.8 | 0.0 | -0.85 | 1.17 | 0.75 | 0.86 | 3.88 | 8170 | 1030 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2025-05-09 | 2023-10-23 | 2.8 | 3.38 | 2.83 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.006 | 0.72 | 0.0 | 0.04 | 27.67 | 0.01 | 2.087 | 17.90 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.00 | 0.28 | 0.88 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2025-04-26 | 2023-10-23 | 2.8 | 3.38 | 2.83 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.006 | 0.72 | 0.0 | 0.04 | 27.69 | 0.01 | 2.089 | 18.34 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.99 | 0.28 | 0.88 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8UQi | 42469 | 2024-11-14 | 2023-10-23 | 4.5 | 7.64 | 4.73 | 6.8 | 0.003 | 0.84 | 0.0 | 0.04 | 13.62 | 0.01 | 2.118 | 24.94 | 0.13 | 7.6 | 92.4 | 0.0 | -1.83 | 0.90 | 0.79 | — | 6.9 | 0.004 | 0.91 | 0.0 | 0.05 | 14.20 | 0.01 | 2.237 | 20.25 | 0.00 | 5.5 | 93.5 | 0.9 | -0.41 | 3.90 | 0.86 | 0.68 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UQi | 42469 | 2025-07-25 | 2023-10-23 | 4.5 | 7.64 | 4.71 | 6.8 | 0.003 | 0.84 | 0.0 | 0.04 | 13.62 | 0.01 | 2.118 | 24.94 | 0.13 | 7.6 | 92.4 | 0.0 | -1.83 | 0.90 | 0.79 | — | 6.9 | 0.003 | 0.91 | 0.0 | 0.05 | 14.20 | 0.01 | 2.240 | 19.37 | 0.00 | 5.4 | 93.5 | 1.0 | -0.41 | 3.91 | 0.85 | 0.64 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UQi | 42469 | 2025-06-06 | 2023-10-23 | 4.5 | 7.64 | 4.71 | 6.8 | 0.003 | 0.84 | 0.0 | 0.04 | 13.62 | 0.01 | 2.118 | 24.94 | 0.13 | 7.6 | 92.4 | 0.0 | -1.83 | 0.90 | 0.79 | — | 6.9 | 0.003 | 0.91 | 0.0 | 0.05 | 14.20 | 0.01 | 2.240 | 19.37 | 0.00 | 5.4 | 93.5 | 1.0 | -0.41 | 3.91 | 0.85 | 0.64 | — | 7318 | 962 | 2 | 0 | 0 | 0 | 0 | logfile |