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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UoY | 42441 | 2024-02-15 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 3.4 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 17.69 | 0.00 | 1.889 | 17.22 | 4.99 | 9.2 | 90.7 | 0.1 | -3.33 | 0.86 | 0.22 | 0.25 | 0.30 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoY | 42441 | 2025-01-19 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 3.4 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 3.4 | 0.003 | 0.70 | 0.0 | 0.04 | 17.29 | 0.00 | 2.298 | 9.71 | 4.55 | 8.1 | 91.8 | 0.1 | -2.85 | 1.38 | 0.21 | 0.24 | 0.66 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoY | 42441 | 2025-05-15 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 30.0 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 30.0 | 0.003 | 0.70 | 0.0 | 0.04 | 17.29 | 0.00 | 2.298 | 9.71 | 4.55 | 8.1 | 91.8 | 0.1 | -2.85 | 1.38 | 0.21 | 0.24 | 0.66 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoY | 42441 | 2025-06-11 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 30.0 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 30.0 | 0.004 | 0.76 | 0.0 | 0.04 | 17.60 | 0.01 | 2.286 | 12.82 | 5.87 | 11.1 | 88.8 | 0.1 | -3.05 | 1.38 | 0.22 | 0.25 | 0.68 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoY | 42441 | 2025-08-23 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 30.0 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 30.0 | 0.004 | 0.77 | 0.0 | 0.04 | 17.37 | 0.01 | 2.261 | 15.02 | 4.84 | 11.8 | 88.1 | 0.1 | -3.27 | 0.83 | 0.22 | 0.25 | 0.18 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8WUA | 37852 | 2025-04-27 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 16.90 | 0.00 | 2.499 | 10.32 | 4.11 | 6.4 | 93.6 | 0.0 | 0.51 | 1.45 | 0.54 | 0.69 | 1.15 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-01-14 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 16.81 | 0.00 | 2.566 | 9.50 | 3.45 | 6.1 | 93.9 | 0.0 | 0.42 | 1.45 | 0.54 | 0.69 | 1.10 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2024-02-13 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 16.76 | 0.00 | 2.274 | 9.96 | 3.45 | 6.1 | 93.9 | 0.0 | 0.55 | 0.91 | 0.54 | 0.68 | 1.16 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-02-11 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 16.81 | 0.00 | 2.566 | 9.50 | 3.45 | 6.1 | 93.9 | 0.0 | 0.42 | 1.45 | 0.54 | 0.69 | 1.10 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-03-06 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.76 | 0.0 | 0.04 | 16.77 | 0.00 | 2.559 | 8.96 | 3.12 | 5.8 | 94.2 | 0.0 | 0.67 | 1.44 | 0.54 | 0.69 | 1.10 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2024-11-14 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 16.95 | 0.00 | 2.577 | 8.87 | 2.96 | 6.1 | 93.9 | 0.0 | 0.48 | 1.82 | 0.54 | 0.69 | 1.15 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-05-10 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.76 | 0.0 | 0.04 | 16.96 | 0.00 | 2.434 | 8.33 | 3.62 | 6.1 | 93.9 | 0.0 | 0.12 | 1.49 | 0.54 | 0.69 | 1.16 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-06-05 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 16.90 | 0.00 | 2.499 | 10.32 | 4.11 | 6.4 | 93.6 | 0.0 | 0.51 | 1.45 | 0.54 | 0.69 | 1.15 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-07-24 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 16.90 | 0.00 | 2.499 | 10.32 | 4.11 | 6.4 | 93.6 | 0.0 | 0.51 | 1.45 | 0.54 | 0.69 | 1.15 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2025-08-22 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 17.00 | 0.00 | 2.575 | 10.50 | 3.62 | 5.8 | 94.2 | 0.0 | 0.53 | 1.49 | 0.54 | 0.68 | 1.12 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUA | 37852 | 2024-12-27 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 16.95 | 0.00 | 2.577 | 8.87 | 2.96 | 6.1 | 93.9 | 0.0 | 0.48 | 1.82 | 0.54 | 0.69 | 1.15 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UoP | 42435 | 2024-12-30 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 17.06 | 0.00 | 2.263 | 11.38 | 3.37 | 12.6 | 87.1 | 0.3 | -3.11 | 0.92 | 0.24 | 0.23 | 0.07 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoP | 42435 | 2025-05-15 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.88 | 0.00 | 2.309 | 11.00 | 2.79 | 10.7 | 88.9 | 0.3 | -3.00 | 0.92 | 0.23 | 0.23 | 0.32 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoP | 42435 | 2024-11-17 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 17.06 | 0.00 | 2.263 | 11.38 | 3.37 | 12.6 | 87.1 | 0.3 | -3.11 | 0.92 | 0.24 | 0.23 | 0.07 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoP | 42435 | 2025-08-23 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.90 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.007 | 0.95 | 0.0 | 0.05 | 17.61 | 0.01 | 2.136 | 23.89 | 3.67 | 16.7 | 82.9 | 0.3 | -3.96 | 1.01 | 0.25 | 0.26 | 0.38 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |