Table showing results for January 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7T4X	25691	2022-01-10	2021-12-10	2.8	3.07	2.83	3.1	0.006	0.93	0.0	0.05	12.97	0.01	2.392	0.82	1.52	1.4	98.6	0.0	-0.26	0.66	0.83	3.93	3.1	0.002	0.53	0.0	0.04	14.84	0.00	2.088	5.41	0.51	2.5	97.5	0.0	1.91	0.89	0.66	0.82	3.12	29234	1778	11	0	7	13	14614	logfile
✔	7SZ7	25563	2022-01-08	2021-11-25	3.4	4.38	—	3.7	0.005	0.79	0.0	0.05	14.43	0.00	1.707	9.79	1.81	11.0	88.6	0.4	-4.49	0.86	0.78	2.38	3.7	0.003	0.68	0.0	0.04	15.22	0.00	2.224	11.04	0.17	9.3	90.6	0.1	-2.05	0.56	0.92	0.87	2.25	10218	1328	4	0	0	0	0	logfile
✘	7SZ0	25558	2022-01-09	2021-11-25	3.3	4.16	—	3.5	0.005	0.79	0.0	0.05	14.46	0.00	2.175	6.34	1.73	11.1	88.6	0.3	-4.37	0.87	0.82	2.87	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10216	1322	4	0	0	0	0	logfile
✔	7SZ5	25561	2022-01-08	2021-11-25	3.6	4.60	—	3.8	0.007	0.90	0.0	0.06	14.97	0.00	1.947	18.21	2.83	16.8	83.0	0.2	-5.33	0.86	0.75	1.50	3.8	0.002	0.69	0.0	0.04	15.31	0.00	2.191	14.30	0.38	11.2	88.8	0.0	-2.46	1.64	0.91	0.85	0.99	9367	1214	4	0	0	0	0	logfile
✔	7SZ1	25559	2022-01-09	2021-11-25	3.4	4.37	—	3.5	0.005	0.79	0.0	0.05	14.47	0.00	2.092	10.94	1.65	14.5	85.3	0.2	-4.74	0.85	0.75	1.55	3.5	0.003	0.72	0.0	0.04	15.24	0.00	2.104	13.34	0.26	11.0	88.9	0.1	-2.54	0.60	0.89	0.82	1.27	10216	1322	4	0	0	0	0	logfile
✔	7SYE	25523	2022-01-09	2021-11-24	3.3	4.16	—	3.5	0.007	0.86	2.0	0.05	14.40	0.00	2.060	11.84	1.65	14.8	84.9	0.3	-4.43	0.85	0.77	2.18	3.5	0.003	0.69	0.0	0.04	14.96	0.00	2.114	11.59	0.35	10.8	89.1	0.1	-1.98	0.57	0.88	0.84	2.03	10216	1322	4	0	0	0	0	logfile
✘	7SYD	25522	2022-01-09	2021-11-24	3.1	3.98	—	3.4	0.007	0.79	2.0	0.05	14.22	0.00	2.068	8.34	1.99	10.4	89.4	0.2	-3.66	0.88	0.83	2.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10216	1322	4	0	0	0	0	logfile
✔	7STW	25437	2022-01-09	2021-11-15	2.37	2.44	1.98	2.4	0.002	0.50	0.0	0.04	12.97	0.00	1.947	1.92	0.00	1.2	98.8	0.0	0.17	0.74	0.80	2.93	2.4	0.003	0.54	0.0	0.04	17.56	0.00	2.051	4.36	1.16	1.8	98.2	0.0	3.01	0.62	0.76	0.83	2.27	16829	2040	36	0	24	257	0	logfile
✔	7STX	25438	2022-01-08	2021-11-15	3.14	3.25	—	3.3	0.041	1.86	11.0	0.08	17.27	0.01	1.362	9.55	2.09	9.7	90.0	0.4	-5.56	0.61	0.66	1.80	3.2	0.004	0.75	0.0	0.04	18.30	0.01	2.072	11.85	0.44	8.6	91.3	0.1	-1.16	0.89	0.65	0.74	1.81	8611	1049	5	0	30	0	0	logfile
✔	7VX5	32169	2022-01-07	2021-11-12	3.8	4.03	—	4.1	0.003	0.64	0.0	0.04	8.60	0.00	2.246	7.35	0.14	1.0	99.0	0.0	-2.69	0.56	0.68	2.10	4.0	0.003	0.66	0.0	0.04	14.78	0.00	2.174	10.19	0.29	2.0	98.0	0.0	0.79	1.40	0.63	0.75	2.00	6487	791	4	0	6	0	0	logfile
✔	7VX9	32172	2022-01-12	2021-11-12	4.0	4.30	—	4.2	0.002	0.37	0.0	0.04	7.20	0.00	2.022	12.45	0.00	4.1	95.8	0.1	-2.09	0.63	0.59	—	4.1	0.003	0.64	0.0	0.04	14.40	0.00	1.913	37.84	0.48	3.9	96.0	0.2	-0.67	1.39	0.67	0.72	—	46098	3789	4	0	0	0	16250	logfile
✔	7VX4	32168	2022-01-07	2021-11-12	3.9	4.09	—	4.2	0.002	0.61	0.0	0.04	8.47	0.00	2.082	7.42	0.14	0.9	99.0	0.1	-2.27	0.58	0.69	2.52	4.1	0.003	0.69	0.0	0.04	15.02	0.00	2.222	11.13	0.72	1.8	98.2	0.0	0.19	0.92	0.64	0.76	1.81	6493	791	4	0	6	0	0	logfile
✔	7VX7	32170	2022-01-10	2021-11-12	3.6	2.45	—	1.8	0.010	1.26	1.0	0.07	9.43	0.01	1.349	4.60	0.11	3.8	95.9	0.3	-1.25	0.54	0.44	0.90	1.6	0.005	0.76	0.0	0.05	13.73	0.01	2.081	13.01	0.40	4.7	95.2	0.1	-0.62	0.86	0.64	0.62	1.22	24717	3162	3	0	0	0	0	logfile
✔	7VXE	32177	2022-01-12	2021-11-12	3.2	2.31	—	2.0	0.003	0.45	0.0	0.04	7.36	0.00	2.082	1.83	0.00	4.4	95.5	0.1	-1.79	0.61	0.54	2.41	2.1	0.003	0.58	0.0	0.04	12.72	0.00	1.935	4.93	0.22	3.3	96.6	0.2	-0.03	1.46	0.70	0.72	2.67	49296	3186	3	0	0	0	24366	logfile
✔	7VXC	32175	2022-01-12	2021-11-12	3.9	4.21	—	4.1	0.002	0.40	0.0	0.04	7.11	0.00	2.022	12.33	0.00	4.2	95.8	0.0	-1.96	0.63	0.62	0.87	4.1	0.008	0.85	1.0	0.04	14.01	0.00	1.727	37.58	0.30	5.6	94.3	0.1	-0.77	1.70	0.67	0.73	1.15	46264	3801	4	0	0	0	16332	logfile
✔	7Q9P	13875	2022-01-10	2021-11-12	4.5	5.25	—	4.6	0.004	0.63	2.0	0.04	10.50	0.00	1.893	9.35	1.20	5.0	94.6	0.4	-0.75	0.81	0.66	—	4.7	0.005	0.70	0.0	0.04	11.71	0.00	2.033	21.75	0.00	6.0	93.8	0.2	-0.89	1.57	0.84	0.74	—	30494	3807	24	0	52	0	0	logfile
✔	7Q9M	13873	2022-01-10	2021-11-12	3.7	3.93	—	3.7	0.004	0.52	0.0	0.04	9.51	0.00	1.937	4.26	0.75	2.9	96.9	0.1	0.25	0.83	0.84	2.04	3.8	0.004	0.68	0.0	0.04	13.42	0.00	2.110	12.80	0.23	4.8	95.1	0.1	0.12	0.82	0.83	0.84	1.82	28406	3613	25	0	43	0	0	logfile
✔	7Q9i	13870	2022-01-11	2021-11-12	4.9	5.59	—	5.3	0.003	0.54	0.0	0.04	10.81	0.00	2.216	4.73	0.80	3.4	96.5	0.0	-0.34	0.76	0.63	—	5.3	0.003	0.61	0.0	0.04	11.61	0.00	2.066	15.11	0.06	3.4	96.6	0.0	-0.19	1.93	0.79	0.71	—	30966	3881	24	0	53	0	0	logfile
✔	7VXA	32173	2022-01-12	2021-11-12	3.9	4.16	—	4.1	0.002	0.41	0.0	0.04	7.17	0.00	2.017	12.91	0.00	4.3	95.7	0.0	-1.90	0.60	0.60	0.95	4.0	0.005	0.74	0.0	0.04	13.79	0.00	1.906	33.99	0.15	4.8	95.2	0.1	-0.61	1.69	0.65	0.72	1.08	46176	3795	4	0	0	0	16288	logfile
✔	7VXi	32180	2022-01-10	2021-11-12	3.4	2.35	—	2.0	0.002	0.49	0.0	0.04	7.29	0.00	2.125	3.01	0.00	4.3	95.5	0.1	-1.83	0.65	0.60	1.83	2.1	0.004	0.70	0.0	0.05	13.63	0.01	2.105	10.97	0.29	4.0	95.8	0.2	-0.16	1.43	0.72	0.70	2.44	24570	3144	3	0	0	0	0	logfile

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