Table showing results for March 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7TLY	25990	2022-03-15	2022-01-19	3.0	3.01	2.93	3.0	0.010	1.30	2.0	0.08	9.90	0.00	2.556	1.69	0.00	2.5	97.5	0.0	0.36	0.64	0.76	4.98	3.0	0.011	1.39	0.0	0.04	14.16	0.01	2.216	3.88	1.75	3.0	97.0	0.0	-0.68	1.02	0.68	0.82	4.60	3105	408	4	0	4	0	0	logfile
✔	7TLZ	25991	2022-03-15	2022-01-19	3.3	3.47	3.24	3.4	0.010	1.29	0.0	0.07	9.18	0.01	2.581	0.87	0.31	2.8	97.2	0.0	1.02	0.68	0.81	5.51	3.4	0.004	0.65	0.0	0.05	12.81	0.00	2.303	3.93	0.00	4.4	95.6	0.0	0.58	1.01	0.68	0.87	5.86	3621	475	3	0	6	0	0	logfile
✔	7TM0	25992	2022-03-18	2022-01-19	3.1	3.24	3.21	3.2	0.009	1.35	0.0	0.08	8.72	0.01	2.264	1.47	0.17	2.4	97.6	0.0	0.62	0.73	0.76	3.91	3.2	0.004	0.65	0.0	0.05	11.94	0.00	2.097	2.77	0.23	2.7	97.3	0.0	0.30	1.30	0.75	0.78	3.63	27963	4401	19	0	52	0	0	logfile
✔	7TLB	25986	2022-03-17	2022-01-18	3.06	3.26	—	3.2	0.012	1.74	1.0	0.09	13.14	0.01	2.531	0.11	0.82	5.3	94.7	0.1	-1.00	0.54	0.56	2.31	3.2	0.004	0.64	0.0	0.04	15.14	0.01	2.099	7.16	0.16	3.1	96.9	0.0	0.14	1.51	0.76	0.85	2.84	22806	2916	3	0	0	0	0	logfile
✔	7TLD	25988	2022-03-17	2022-01-18	2.89	3.35	—	3.3	0.013	1.80	0.0	0.09	13.31	0.01	2.524	0.07	0.94	5.2	94.6	0.2	-1.25	0.33	0.48	3.75	3.3	0.004	0.62	0.0	0.04	15.31	0.00	2.158	6.16	1.52	3.4	96.6	0.0	0.12	0.60	0.60	0.77	2.98	22812	2916	3	0	0	0	0	logfile
✔	7TLC	25987	2022-03-17	2022-01-18	2.83	3.28	—	3.2	0.013	1.82	3.0	0.10	13.37	0.02	2.518	0.07	1.54	5.3	94.5	0.2	-1.18	0.34	0.47	4.12	3.2	0.004	0.64	0.0	0.04	15.71	0.01	2.106	6.40	2.20	3.6	96.4	0.0	0.00	0.60	0.46	0.65	3.48	23058	2948	3	0	0	0	0	logfile
✔	7TLA	25985	2022-03-17	2022-01-18	3.13	3.36	—	3.3	0.012	1.76	3.0	0.09	13.37	0.01	2.522	0.09	1.12	6.0	93.7	0.3	-1.09	0.58	0.61	4.05	3.3	0.007	0.70	0.0	0.05	15.02	0.00	2.069	7.68	0.27	4.8	95.2	0.0	-0.14	0.65	0.75	0.84	3.37	23052	2948	3	0	0	0	0	logfile
✔	7WK8	32562	2022-03-15	2022-01-08	3.61	2.50	—	2.3	0.002	0.52	0.0	0.04	6.81	0.00	2.270	7.25	0.00	4.5	95.3	0.2	-1.21	0.77	0.74	4.09	2.3	0.003	0.62	0.0	0.04	13.24	0.01	2.165	10.17	0.00	3.0	96.9	0.2	0.47	1.28	0.79	0.78	3.76	3982	516	4	0	0	0	0	logfile
✔	7WK2	32556	2022-03-18	2022-01-08	3.1	2.75	—	3.3	0.004	0.57	0.0	0.04	7.30	0.00	1.974	3.94	0.00	3.8	96.2	0.0	-2.33	0.66	0.57	1.89	3.3	0.003	0.71	0.0	0.05	14.60	0.00	1.947	10.19	0.32	2.7	97.3	0.0	-0.05	1.16	0.80	0.79	2.05	24879	3171	3	0	0	0	0	logfile
✔	7WKA	32564	2022-03-18	2022-01-08	3.64	3.27	—	3.6	0.002	0.47	0.0	0.04	7.20	0.00	2.171	7.35	0.11	4.0	95.9	0.1	-1.95	0.59	0.46	0.82	3.8	0.004	0.79	0.0	0.05	13.97	0.01	2.068	15.37	0.68	3.4	96.5	0.1	-0.45	1.57	0.76	0.72	1.23	31575	4041	7	0	0	0	0	logfile
✔	7WK3	32557	2022-03-18	2022-01-08	3.4	2.86	—	3.4	0.004	0.56	0.0	0.04	7.18	0.00	1.998	3.79	0.00	3.6	96.3	0.0	-2.17	0.65	0.57	1.77	3.3	0.004	0.71	0.0	0.04	14.43	0.00	2.154	10.51	0.36	2.9	97.1	0.0	-0.15	1.12	0.79	0.79	1.85	24805	3162	3	0	0	0	0	logfile
✔	7WK6	32560	2022-03-15	2022-01-08	3.67	2.86	—	3.8	0.008	1.07	1.0	0.07	15.40	0.01	2.328	5.65	0.57	4.7	94.9	0.4	-5.05	0.77	0.77	2.23	3.7	0.005	0.86	0.0	0.05	18.07	0.00	2.204	16.16	0.43	3.4	96.6	0.0	-1.06	1.41	0.78	0.78	1.72	6428	791	2	0	0	0	0	logfile
✔	7WK5	32559	2022-03-18	2022-01-08	3.66	3.93	—	3.7	0.004	0.75	9.0	0.06	12.41	0.00	2.198	9.99	0.40	3.7	96.2	0.1	-3.67	0.66	0.59	0.50	3.7	0.005	0.77	0.0	0.04	15.41	0.00	2.134	12.38	0.24	4.0	96.0	0.0	-1.37	0.92	0.68	0.64	0.44	29601	3750	4	0	0	0	0	logfile
✔	7WK9	32563	2022-03-18	2022-01-08	3.48	3.16	—	3.7	0.002	0.47	0.0	0.04	7.12	0.00	2.151	7.37	0.00	3.8	96.1	0.1	-2.01	0.60	0.48	0.90	3.7	0.004	0.77	0.0	0.04	14.04	0.01	2.091	13.00	0.57	3.4	96.6	0.1	-0.37	1.14	0.77	0.75	1.25	29907	3823	7	0	0	0	0	logfile
✔	7WK4	32558	2022-03-18	2022-01-08	3.69	3.98	—	3.8	0.004	0.69	9.0	0.06	13.54	0.00	2.202	11.81	0.61	2.4	97.4	0.1	-0.28	0.68	0.62	0.67	3.8	0.006	0.84	0.0	0.04	15.55	0.01	2.138	11.86	0.24	3.2	96.8	0.0	-0.36	0.70	0.71	0.66	0.92	29541	3743	4	0	0	0	0	logfile
✔	7TFo	25878	2022-03-18	2022-01-06	4.1	3.83	—	3.8	0.005	0.70	0.0	0.05	13.15	0.01	2.118	16.60	0.21	8.9	91.1	0.0	-1.50	0.74	0.73	—	3.7	0.003	0.62	0.0	0.04	13.35	0.00	2.126	12.61	0.00	6.8	93.2	0.0	-1.04	0.71	0.74	0.75	—	17774	2283	20	0	21	0	0	logfile
✔	7TFN	25877	2022-03-19	2022-01-06	4.0	4.13	—	4.0	0.003	0.63	0.0	0.06	13.76	0.01	1.966	14.42	0.10	5.9	93.9	0.2	-0.97	0.78	0.79	—	4.0	0.004	0.64	0.0	0.05	15.58	0.00	2.126	15.00	0.26	7.0	93.0	0.0	-0.83	0.37	0.79	0.81	—	18692	2344	31	0	58	0	0	logfile
✔	7WHM	32504	2022-03-15	2021-12-31	2.7	2.86	—	2.8	0.006	0.64	0.0	0.05	13.85	0.00	2.155	6.30	0.00	3.1	96.9	0.0	0.15	0.43	0.87	4.68	2.8	0.005	0.56	0.0	0.05	15.99	0.00	2.246	5.73	0.74	2.5	97.5	0.0	1.40	1.11	0.40	0.84	3.83	9650	1214	1	0	0	0	0	logfile
✔	7TDF	25827	2022-03-18	2021-12-31	2.7	2.10	2.66	1.9	0.006	0.74	0.0	0.05	12.56	0.01	2.148	2.71	0.19	3.5	96.5	0.0	0.06	0.74	0.77	4.39	1.9	0.006	0.65	0.0	0.04	15.41	0.01	2.090	5.68	1.04	2.9	97.1	0.0	2.17	1.14	0.69	0.74	3.77	19566	1188	2	0	0	0	9792	logfile
✔	7WHN	32505	2022-03-15	2021-12-31	3.3	2.99	—	3.2	0.009	0.80	0.0	0.05	13.81	0.01	2.147	7.64	0.10	4.5	95.5	0.0	-1.29	0.41	0.83	2.92	3.2	0.002	0.49	0.0	0.04	15.01	0.00	2.268	5.47	0.19	2.4	97.6	0.0	1.01	0.40	0.37	0.80	2.24	9284	1170	1	0	0	0	0	logfile

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