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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7o85 | 12761 | 2021-05-05 | 2021-04-14 | 3.3 | 3.50 | — | 3.5 | 0.002 | 0.49 | 0.0 | 0.04 | 13.51 | 0.00 | 1.470 | 7.40 | 0.00 | 3.3 | 96.7 | 0.0 | -0.25 | 0.71 | 0.75 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28525 | 3843 | 28 | 0 | 14 | 0 | 0 | logfile |
✔ | 7ME0 | 23786 | 2021-05-06 | 2021-04-06 | 2.48 | 2.69 | 2.55 | 2.6 | 0.006 | 0.55 | 0.0 | 0.05 | 14.32 | 0.00 | 2.135 | 5.75 | 4.96 | 2.0 | 98.0 | 0.0 | -0.22 | 0.82 | 0.90 | 5.65 | 2.6 | 0.005 | 0.63 | 0.0 | 0.05 | 15.62 | 0.00 | 2.212 | 6.64 | 2.73 | 2.0 | 98.0 | 0.0 | 0.10 | 2.52 | 0.83 | 0.90 | 5.54 | 16386 | 2082 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o1Q | 12696 | 2021-05-06 | 2021-03-30 | 3.4 | 3.81 | — | 3.4 | 0.007 | 0.56 | 0.0 | 0.05 | 9.97 | 0.00 | 2.129 | 4.28 | 0.39 | 2.7 | 97.3 | 0.0 | -0.21 | 0.85 | 0.81 | 4.50 | 3.5 | 0.004 | 0.54 | 0.0 | 0.05 | 13.28 | 0.00 | 1.987 | 6.63 | 0.17 | 3.6 | 96.4 | 0.0 | 0.27 | 2.18 | 0.81 | 0.81 | 4.10 | 32434 | 2051 | 7 | 0 | 0 | 0 | 15921 | logfile |
✔ | 7M4R | 23665 | 2021-05-03 | 2021-03-22 | 3.65 | 4.49 | — | 4.2 | 0.007 | 0.85 | 0.0 | 0.05 | 14.71 | 0.01 | 2.259 | 8.94 | 0.00 | 14.2 | 85.6 | 0.2 | -2.94 | 0.74 | 0.66 | 1.90 | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 15.90 | 0.00 | 2.271 | 7.65 | 0.00 | 7.0 | 93.0 | 0.0 | -1.06 | 0.66 | 0.87 | 0.83 | 1.52 | 5092 | 639 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EFC | 31083 | 2021-05-04 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.033 | 3.25 | 80.0 | 0.10 | 14.95 | 0.00 | 0.000 | 2.92 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✘ | 7EFD | 31084 | 2021-05-04 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.034 | 3.25 | 60.0 | 0.10 | 15.30 | 0.00 | 0.000 | 2.62 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7M17 | 23614 | 2021-05-04 | 2021-03-12 | 3.65 | 3.90 | 3.47 | 3.8 | 0.010 | 1.02 | 0.0 | 0.05 | 16.06 | 0.00 | 2.234 | 3.21 | 0.00 | 4.3 | 95.7 | 0.0 | -1.06 | 0.68 | 0.80 | 1.78 | 3.8 | 0.004 | 0.63 | 0.0 | 0.04 | 16.27 | 0.00 | 2.148 | 7.79 | 0.63 | 4.4 | 95.6 | 0.0 | 0.83 | 1.22 | 0.68 | 0.80 | 1.53 | 16039 | 1878 | 12 | 0 | 19 | 0 | 0 | logfile |
✔ | 7M19 | 23616 | 2021-05-04 | 2021-03-12 | 3.69 | 3.92 | 3.50 | 3.8 | 0.010 | 1.03 | 0.0 | 0.05 | 16.06 | 0.00 | 2.231 | 3.80 | 0.06 | 3.9 | 96.1 | 0.0 | -0.78 | 0.68 | 0.80 | 1.98 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 16.33 | 0.00 | 2.124 | 8.41 | 0.69 | 4.6 | 95.4 | 0.0 | 0.39 | 1.22 | 0.68 | 0.80 | 1.64 | 16039 | 1878 | 12 | 0 | 19 | 0 | 0 | logfile |
✔ | 7M0J | 23612 | 2021-05-05 | 2021-03-11 | 3.52 | 3.78 | — | 3.7 | 0.013 | 1.87 | 1.0 | 0.10 | 13.97 | 0.01 | 2.528 | 0.13 | 1.68 | 7.4 | 92.2 | 0.5 | -2.03 | 0.77 | 0.78 | 2.38 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 15.15 | 0.00 | 2.116 | 9.03 | 0.23 | 3.7 | 96.3 | 0.0 | 0.07 | 1.33 | 0.78 | 0.80 | 2.27 | 22827 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7M05 | 23609 | 2021-05-07 | 2021-03-10 | 2.39 | 2.66 | 2.49 | 2.6 | 0.013 | 0.97 | 0.0 | 0.06 | 14.86 | 0.01 | 2.064 | 3.55 | 0.50 | 6.9 | 92.3 | 0.8 | -3.01 | 0.75 | 0.81 | 4.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57152 | 3636 | 12 | 0 | 4 | 0 | 28188 | logfile |
✔ | 7NTA | 12586 | 2021-05-05 | 2021-03-09 | 3.5 | 3.71 | 3.63 | 3.6 | 0.024 | 1.28 | 0.0 | 0.05 | 14.11 | 0.00 | 2.050 | 6.96 | 0.00 | 4.1 | 95.9 | 0.0 | -1.38 | 0.80 | 0.81 | 2.51 | 3.6 | 0.003 | 0.75 | 0.0 | 0.05 | 15.14 | 0.00 | 2.010 | 7.37 | 0.04 | 4.1 | 95.9 | 0.0 | -0.61 | 1.16 | 0.77 | 0.81 | 2.29 | 26805 | 3261 | 34 | 0 | 80 | 89 | 0 | logfile |
✘ | 7NT9 | 12585 | 2021-05-05 | 2021-03-09 | 3.36 | 3.62 | 3.55 | 3.5 | 0.024 | 1.25 | 0.0 | 0.05 | 13.44 | 0.00 | 2.229 | 6.19 | 0.00 | 3.8 | 96.2 | 0.0 | -0.98 | 0.78 | 0.81 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26952 | 3261 | 39 | 0 | 87 | 132 | 0 | logfile |
✔ | 7NTC | 12587 | 2021-05-05 | 2021-03-09 | 3.6 | 4.35 | 3.76 | 4.1 | 0.019 | 1.04 | 0.0 | 0.05 | 14.36 | 0.00 | 2.165 | 7.48 | 0.00 | 6.7 | 93.2 | 0.1 | -0.97 | 0.84 | 0.83 | 1.67 | 4.1 | 0.005 | 0.74 | 0.0 | 0.04 | 15.66 | 0.00 | 2.153 | 8.31 | 0.03 | 5.9 | 94.0 | 0.1 | -0.69 | 0.38 | 0.84 | 0.83 | 1.47 | 30005 | 3698 | 33 | 0 | 81 | 0 | 0 | logfile |
✔ | 7LYM | 23595 | 2021-05-05 | 2021-03-07 | 3.57 | 3.82 | — | 3.7 | 0.012 | 1.71 | 2.0 | 0.09 | 12.55 | 0.02 | 2.532 | 0.21 | 0.57 | 5.5 | 94.3 | 0.2 | -1.16 | 0.78 | 0.78 | 2.67 | 3.7 | 0.005 | 0.66 | 0.0 | 0.05 | 14.19 | 0.00 | 2.111 | 6.68 | 0.19 | 4.7 | 95.3 | 0.0 | 0.21 | 1.27 | 0.81 | 0.84 | 2.23 | 23912 | 3005 | 6 | 0 | 33 | 0 | 0 | logfile |
✔ | 7LYQ | 23599 | 2021-05-05 | 2021-03-07 | 3.34 | 3.59 | — | 3.6 | 0.013 | 1.74 | 3.0 | 0.09 | 12.49 | 0.02 | 2.256 | 0.39 | 0.55 | 5.8 | 93.7 | 0.4 | -0.90 | 0.75 | 0.78 | 3.40 | 3.6 | 0.002 | 0.57 | 0.0 | 0.04 | 14.10 | 0.00 | 2.161 | 5.16 | 0.08 | 3.1 | 96.9 | 0.0 | 0.72 | 0.69 | 0.78 | 0.84 | 2.42 | 23642 | 2985 | 6 | 0 | 38 | 0 | 0 | logfile |
✔ | 7LYP | 23598 | 2021-05-05 | 2021-03-07 | 4.05 | 4.38 | — | 4.1 | 0.012 | 1.72 | 5.0 | 0.09 | 12.77 | 0.02 | 1.562 | 0.95 | 1.02 | 6.8 | 92.4 | 0.7 | -1.35 | 0.76 | 0.72 | — | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 12.46 | 0.00 | 2.085 | 9.71 | 0.00 | 4.8 | 95.2 | 0.0 | -0.03 | 0.75 | 0.83 | 0.82 | — | 23506 | 2985 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 7LYN | 23596 | 2021-05-05 | 2021-03-07 | 3.32 | 3.52 | — | 3.5 | 0.012 | 1.73 | 7.0 | 0.09 | 12.64 | 0.02 | 2.473 | 0.56 | 0.59 | 5.9 | 93.9 | 0.2 | -1.03 | 0.76 | 0.79 | 3.64 | 3.5 | 0.004 | 0.60 | 0.0 | 0.04 | 14.24 | 0.00 | 2.156 | 5.89 | 0.08 | 3.4 | 96.6 | 0.0 | 0.55 | 0.68 | 0.80 | 0.86 | 2.95 | 23642 | 2985 | 6 | 0 | 38 | 0 | 0 | logfile |
✔ | 7LYo | 23597 | 2021-05-05 | 2021-03-07 | 3.32 | 3.53 | — | 3.5 | 0.012 | 1.74 | 6.0 | 0.10 | 12.46 | 0.02 | 2.509 | 0.58 | 0.47 | 5.9 | 93.7 | 0.4 | -0.93 | 0.76 | 0.80 | 3.68 | 3.5 | 0.005 | 0.65 | 0.0 | 0.05 | 14.21 | 0.00 | 2.154 | 6.68 | 0.27 | 3.8 | 96.1 | 0.1 | 0.47 | 0.69 | 0.80 | 0.86 | 2.87 | 23649 | 2982 | 6 | 0 | 40 | 0 | 0 | logfile |
✔ | 7LYK | 23593 | 2021-05-05 | 2021-03-07 | 3.65 | 3.91 | — | 3.8 | 0.013 | 1.71 | 5.0 | 0.09 | 12.50 | 0.02 | 2.421 | 0.58 | 0.43 | 5.7 | 94.0 | 0.3 | -0.96 | 0.77 | 0.74 | 2.88 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.87 | 0.00 | 2.156 | 6.35 | 0.04 | 3.3 | 96.7 | 0.0 | 0.64 | 1.24 | 0.81 | 0.82 | 2.10 | 23444 | 2983 | 6 | 0 | 25 | 0 | 0 | logfile |
✔ | 7LYL | 23594 | 2021-05-05 | 2021-03-07 | 3.72 | 4.02 | — | 3.8 | 0.012 | 1.71 | 4.0 | 0.09 | 12.86 | 0.02 | 1.986 | 0.55 | 0.80 | 5.3 | 94.5 | 0.2 | -0.96 | 0.77 | 0.76 | 2.37 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.25 | 0.00 | 2.180 | 7.38 | 0.31 | 3.5 | 96.5 | 0.0 | 0.41 | 1.28 | 0.81 | 0.84 | 1.92 | 23828 | 3003 | 6 | 0 | 28 | 0 | 0 | logfile |