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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D0B | 27104 | 2022-07-06 | 2022-05-26 | 3.43 | 4.09 | 3.52 | 2.2 | 0.002 | 0.48 | 0.0 | 0.04 | 15.42 | 0.00 | 2.167 | 5.50 | 0.06 | 3.1 | 96.9 | 0.0 | 1.19 | 0.87 | 0.83 | 1.67 | 2.2 | 0.003 | 0.51 | 0.0 | 0.04 | 15.95 | 0.00 | 2.167 | 6.18 | 0.06 | 3.8 | 96.1 | 0.0 | 1.28 | 0.21 | 0.87 | 0.83 | 1.73 | 29367 | 3630 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 8D0K | 27107 | 2022-07-06 | 2022-05-26 | 4.27 | 4.58 | 4.33 | 4.3 | 0.002 | 0.50 | 0.0 | 0.04 | 14.88 | 0.00 | 2.188 | 9.60 | 0.06 | 3.7 | 96.1 | 0.1 | 0.70 | 0.82 | 0.81 | — | 4.3 | 0.003 | 0.55 | 0.0 | 0.04 | 14.88 | 0.00 | 2.170 | 11.15 | 0.00 | 4.9 | 95.0 | 0.1 | 0.61 | 0.28 | 0.82 | 0.80 | — | 31011 | 3820 | 8 | 20 | 0 | 0 | 0 | logfile |
✔ | 8CZo | 27100 | 2022-07-06 | 2022-05-25 | 4.3 | 2.75 | 4.13 | 2.2 | 0.004 | 0.75 | 0.0 | 0.04 | 16.53 | 0.00 | 2.084 | 18.96 | 0.00 | 10.9 | 89.1 | 0.0 | -2.32 | 0.50 | 0.66 | — | 1.8 | 0.004 | 0.89 | 0.0 | 0.05 | 14.10 | 0.01 | 2.033 | 16.83 | 0.05 | 9.1 | 90.9 | 0.0 | -0.71 | 1.45 | 0.50 | 0.65 | — | 34518 | 4268 | 44 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CZD | 27095 | 2022-07-04 | 2022-05-24 | 4.6 | 4.07 | 4.58 | 4.4 | 0.005 | 0.90 | 0.0 | 0.05 | 16.56 | 0.00 | 2.121 | 23.92 | 0.00 | 8.7 | 91.3 | 0.0 | -0.30 | 0.46 | 0.65 | — | 4.2 | 0.004 | 0.89 | 0.0 | 0.05 | 15.77 | 0.00 | 2.097 | 31.08 | 0.00 | 8.7 | 91.3 | 0.0 | -1.10 | 2.32 | 0.44 | 0.61 | — | 17640 | 2120 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CTL | 26994 | 2022-07-03 | 2022-05-16 | 3.1 | 3.52 | 3.12 | 3.3 | 0.009 | 1.32 | 4.0 | 0.09 | 24.25 | 0.01 | 2.280 | 32.18 | 7.20 | 12.1 | 87.4 | 0.5 | -5.68 | 0.62 | 0.46 | 0.80 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 20.87 | 0.00 | 1.956 | 11.51 | 0.58 | 3.3 | 96.7 | 0.0 | -0.66 | 2.44 | 0.80 | 0.80 | 2.22 | 8138 | 401 | 4 | 233 | 0 | 0 | 0 | logfile |
✘ | 8CTK | 26993 | 2022-07-02 | 2022-05-15 | 3.52 | 3.87 | 3.55 | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 14.37 | 0.00 | 2.347 | 4.53 | 0.00 | 3.8 | 96.2 | 0.0 | -1.07 | 0.54 | 0.70 | 0.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3042 | 376 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CSZ | 26976 | 2022-07-03 | 2022-05-13 | 3.2 | 3.55 | 3.13 | 3.3 | 0.005 | 0.67 | 0.0 | 0.04 | 19.39 | 0.00 | 1.962 | 11.85 | 0.00 | 4.9 | 95.1 | 0.0 | -0.97 | 0.84 | 0.86 | 4.03 | 3.3 | 0.004 | 0.59 | 0.0 | 0.03 | 19.19 | 0.00 | 1.963 | 10.50 | 0.00 | 5.1 | 94.9 | 0.0 | -0.36 | 1.12 | 0.84 | 0.88 | 3.50 | 8948 | 494 | 5 | 236 | 3 | 0 | 0 | logfile |
✘ | 7XR6 | 33408 | 2022-07-03 | 2022-05-09 | 3.4 | 3.63 | 3.56 | 3.6 | 0.005 | 0.90 | 0.0 | 0.05 | 14.32 | 0.00 | 1.183 | 10.73 | 0.00 | 2.5 | 97.5 | 0.0 | 0.44 | 0.66 | 0.83 | 1.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10199 | 1272 | 6 | 0 | 39 | 0 | 0 | logfile |
✔ | 7XR4 | 33407 | 2022-07-03 | 2022-05-09 | 3.4 | 3.26 | 3.35 | 3.4 | 0.007 | 0.94 | 0.0 | 0.05 | 14.23 | 0.00 | 2.304 | 10.91 | 0.29 | 2.1 | 97.9 | 0.0 | 1.68 | 0.73 | 0.85 | 1.65 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 15.08 | 0.00 | 2.218 | 9.53 | 0.10 | 1.2 | 98.8 | 0.0 | 2.73 | 0.38 | 0.72 | 0.85 | 1.38 | 10026 | 1278 | 6 | 0 | 27 | 0 | 0 | logfile |
✔ | 7XPX | 33385 | 2022-07-04 | 2022-05-06 | 3.2 | 3.32 | 3.18 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 27.71 | 0.00 | 2.185 | 10.27 | 0.00 | 3.6 | 96.4 | 0.0 | 0.82 | 0.67 | 0.79 | 2.86 | 3.3 | 0.004 | 0.55 | 0.0 | 0.03 | 27.70 | 0.00 | 2.165 | 9.00 | 0.51 | 2.6 | 97.3 | 0.1 | 1.48 | 1.06 | 0.59 | 0.80 | 2.18 | 13408 | 934 | 11 | 290 | 1 | 0 | 0 | logfile |
✔ | 7ZRC | 14910 | 2022-07-06 | 2022-05-04 | 3.5 | 3.13 | 3.03 | 3.0 | 0.006 | 0.60 | 0.0 | 0.05 | 9.83 | 0.01 | 2.125 | 7.57 | 0.99 | 3.3 | 96.7 | 0.0 | -0.03 | 0.71 | 0.72 | 2.99 | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 12.56 | 0.00 | 2.126 | 7.34 | 0.09 | 2.9 | 97.1 | 0.0 | 0.31 | 0.51 | 0.72 | 0.73 | 2.57 | 30724 | 3852 | 24 | 0 | 52 | 0 | 0 | logfile |
✘ | 7ZR8 | 14886 | 2022-07-03 | 2022-05-03 | 3.7 | 3.81 | 3.43 | 3.8 | 0.003 | 0.46 | 0.0 | 0.04 | 8.45 | 0.00 | 2.181 | 7.02 | 0.74 | 3.9 | 96.1 | 0.0 | -0.94 | 0.72 | 0.82 | 2.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3693 | 471 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7ZR9 | 14887 | 2022-07-06 | 2022-05-03 | 4.0 | 4.37 | 4.12 | 4.1 | 0.006 | 0.84 | 3.0 | 0.05 | 10.50 | 0.01 | 2.158 | 8.66 | 1.22 | 3.7 | 96.2 | 0.1 | -0.10 | 0.81 | 0.77 | — | 4.1 | 0.008 | 0.81 | 0.0 | 0.04 | 13.36 | 0.00 | 1.947 | 13.44 | 0.03 | 3.8 | 96.2 | 0.0 | 0.26 | 0.68 | 0.82 | 0.78 | — | 31014 | 3899 | 24 | 0 | 54 | 0 | 0 | logfile |
✔ | 7ZR7 | 14885 | 2022-07-07 | 2022-05-03 | 3.7 | 4.34 | 3.77 | 3.8 | 0.003 | 0.50 | 0.0 | 0.04 | 9.80 | 0.00 | 2.034 | 6.24 | 0.75 | 3.7 | 96.3 | 0.0 | -0.63 | 0.85 | 0.79 | 1.17 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 12.64 | 0.00 | 2.110 | 11.69 | 0.24 | 3.3 | 96.7 | 0.0 | 0.23 | 0.77 | 0.86 | 0.82 | 1.15 | 30764 | 3878 | 24 | 0 | 54 | 0 | 0 | logfile |
✘ | 7XoY | 33363 | 2022-07-03 | 2022-05-01 | 4.25 | 4.23 | 4.31 | 4.3 | 0.006 | 0.73 | 0.0 | 0.05 | 12.27 | 0.00 | 1.257 | 45.15 | 8.23 | 10.2 | 88.7 | 1.2 | -2.66 | 0.80 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13264 | 1832 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7Xo7 | 33339 | 2022-07-06 | 2022-05-01 | 3.38 | 2.45 | 3.48 | 2.1 | 0.002 | 0.42 | 0.0 | 0.04 | 7.66 | 0.00 | 2.025 | 7.28 | 0.08 | 2.0 | 98.0 | 0.0 | -3.21 | 0.62 | 0.55 | 1.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34209 | 4267 | 10 | 0 | 43 | 0 | 0 | logfile |
✔ | 7XoH | 33348 | 2022-07-03 | 2022-05-01 | 3.6 | 3.64 | 3.56 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 12.55 | 0.00 | 2.005 | 33.04 | 4.34 | 10.6 | 89.3 | 0.1 | -4.16 | 0.72 | 0.83 | 2.38 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 14.70 | 0.00 | 2.116 | 9.33 | 0.07 | 7.4 | 92.6 | 0.0 | -1.58 | 0.56 | 0.73 | 0.83 | 2.18 | 13524 | 1832 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7XoB | 33343 | 2022-07-06 | 2022-05-01 | 3.3 | 2.37 | 3.36 | 2.1 | 0.005 | 0.91 | 12.0 | 0.08 | 13.68 | 0.01 | 1.329 | 8.16 | 0.57 | 4.9 | 95.0 | 0.2 | -3.07 | 0.57 | 0.43 | 1.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34108 | 4260 | 10 | 0 | 39 | 0 | 0 | logfile |
✔ | 7Xo9 | 33341 | 2022-07-03 | 2022-05-01 | 3.0 | 2.26 | 3.23 | 3.1 | 0.002 | 0.46 | 0.0 | 0.06 | 13.13 | 0.01 | 2.059 | 3.31 | 0.00 | 2.0 | 98.0 | 0.0 | -1.79 | 0.74 | 0.73 | 2.69 | 2.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.69 | 0.00 | 2.015 | 10.81 | 2.16 | 3.8 | 96.2 | 0.0 | 0.02 | 0.66 | 0.77 | 0.80 | 2.87 | 6483 | 793 | 2 | 0 | 5 | 0 | 0 | logfile |
✔ | 7Xo5 | 33337 | 2022-07-06 | 2022-05-01 | 3.13 | 2.30 | 3.19 | 2.1 | 0.004 | 0.92 | 1.0 | 0.06 | 15.32 | 0.01 | 1.796 | 4.00 | 0.07 | 5.0 | 95.0 | 0.0 | -4.22 | 0.71 | 0.71 | 1.77 | 2.1 | 0.008 | 0.83 | 1.0 | 0.05 | 16.81 | 0.00 | 2.072 | 9.99 | 0.58 | 4.3 | 95.7 | 0.0 | -0.73 | 1.35 | 0.74 | 0.77 | 2.43 | 28503 | 3659 | 8 | 0 | 38 | 0 | 0 | logfile |