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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8R3G | 18864 | 2024-07-20 | 2023-11-09 | 4.4 | 4.64 | 4.35 | 4.4 | 0.013 | 1.54 | 0.0 | 0.10 | 19.04 | 0.01 | 2.243 | 11.48 | 0.18 | 1.7 | 98.3 | 0.0 | -1.19 | 0.73 | 0.52 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.04 | 18.40 | 0.00 | 2.240 | 17.04 | 0.00 | 3.3 | 96.7 | 0.0 | 0.70 | 1.50 | 0.86 | 0.77 | — | 11985 | 1340 | 6 | 82 | 0 | 0 | 0 | logfile |
✔ | 8R3L | 18872 | 2024-07-27 | 2023-11-09 | 3.25 | 2.90 | 3.19 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 17.48 | 0.00 | 1.945 | 6.41 | 0.21 | 3.0 | 97.0 | 0.0 | 0.70 | 0.76 | 0.82 | 2.43 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 17.77 | 0.00 | 1.933 | 7.31 | 1.31 | 3.2 | 96.8 | 0.0 | 0.63 | 0.38 | 0.77 | 0.83 | 2.49 | 35431 | 2149 | 6 | 31 | 0 | 0 | 17553 | logfile |
✘ | 8X2L | 38016 | 2024-07-19 | 2023-11-09 | 2.99 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7099 | 885 | 6 | 0 | 9 | 1 | 0 | logfile |
✔ | 8X2H | 38010 | 2024-07-22 | 2023-11-09 | 2.9 | 3.07 | 2.88 | 3.0 | 0.005 | 0.85 | 1.0 | 0.05 | 20.16 | 0.00 | 2.037 | 16.30 | 13.38 | 8.7 | 91.1 | 0.2 | -4.22 | 0.60 | 0.58 | 0.86 | 3.0 | 0.005 | 0.88 | 1.0 | 0.05 | 19.46 | 0.00 | 1.873 | 15.16 | 6.08 | 7.1 | 92.7 | 0.2 | -1.83 | 1.29 | 0.63 | 0.62 | 0.80 | 19088 | 2363 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X2i | 38011 | 2024-07-22 | 2023-11-09 | 2.5 | 2.63 | 2.53 | 2.7 | 0.009 | 0.93 | 0.0 | 0.06 | 19.08 | 0.01 | 1.057 | 14.15 | 8.96 | 5.6 | 94.2 | 0.2 | -2.37 | 0.62 | 0.67 | 2.62 | 2.6 | 0.003 | 0.61 | 0.0 | 0.05 | 18.73 | 0.00 | 2.067 | 8.39 | 3.30 | 4.0 | 95.9 | 0.0 | 0.30 | 0.58 | 0.60 | 0.64 | 2.23 | 18645 | 2303 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X2K | 38015 | 2024-07-19 | 2023-11-09 | 3.03 | 3.27 | 3.09 | 3.3 | 0.005 | 0.73 | 2.0 | 0.05 | 14.07 | 0.00 | 1.909 | 7.35 | 0.77 | 4.9 | 95.0 | 0.1 | -0.74 | 0.69 | 0.82 | 3.33 | 3.3 | 0.004 | 0.90 | 1.0 | 0.05 | 15.74 | 0.00 | 2.119 | 5.47 | 1.42 | 3.6 | 96.3 | 0.1 | 0.22 | 0.32 | 0.68 | 0.84 | 2.48 | 8570 | 1111 | 6 | 0 | 1 | 2 | 0 | logfile |
✔ | 8R3K | 18871 | 2024-07-21 | 2023-11-09 | 3.43 | 3.17 | 3.32 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 18.62 | 0.00 | 1.888 | 7.20 | 0.00 | 2.4 | 97.6 | 0.0 | 1.23 | 0.77 | 0.86 | 2.39 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 18.90 | 0.00 | 1.926 | 8.23 | 2.86 | 2.8 | 97.2 | 0.0 | 1.19 | 0.93 | 0.77 | 0.86 | 2.18 | 14767 | 1717 | 7 | 41 | 3 | 0 | 0 | logfile |
✔ | 8X1N | 37997 | 2024-07-18 | 2023-11-08 | 3.31 | 3.46 | 3.37 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 16.86 | 0.00 | 2.251 | 2.85 | 0.00 | 2.4 | 97.6 | 0.0 | 2.01 | 0.72 | 0.84 | 2.46 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 16.38 | 0.00 | 2.195 | 3.90 | 2.33 | 3.9 | 96.1 | 0.0 | 2.01 | 0.29 | 0.67 | 0.83 | 1.82 | 4763 | 591 | 3 | 0 | 8 | 0 | 0 | logfile |
✔ | 8R33 | 18859 | 2024-07-19 | 2023-11-08 | 2.29 | 2.45 | 2.30 | 2.4 | 0.003 | 0.56 | 0.0 | 0.04 | 18.61 | 0.00 | 2.171 | 8.27 | 2.39 | 2.0 | 98.0 | 0.0 | 1.52 | 0.67 | 0.86 | 4.80 | 2.4 | 0.004 | 0.59 | 0.0 | 0.04 | 17.67 | 0.00 | 2.120 | 8.21 | 1.26 | 2.0 | 98.0 | 0.0 | 2.36 | 0.62 | 0.66 | 0.86 | 4.90 | 8066 | 978 | 6 | 0 | 8 | 328 | 0 | logfile |
✘ | 8UWS | 42680 | 2024-07-22 | 2023-11-08 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17137 | 2133 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8UX1 | 42685 | 2024-07-21 | 2023-11-08 | 2.5 | 2.29 | — | 2.8 | 0.006 | 0.64 | 0.0 | 0.04 | 25.88 | 0.00 | 2.132 | 5.20 | 1.27 | 2.2 | 97.6 | 0.2 | 1.25 | 0.86 | 0.86 | 4.03 | 2.8 | 0.003 | 0.57 | 0.0 | 0.04 | 26.19 | 0.00 | 2.218 | 5.99 | 1.63 | 2.3 | 97.7 | 0.0 | 1.65 | 1.07 | 0.86 | 0.86 | 3.70 | 16395 | 1332 | 12 | 291 | 0 | 0 | 0 | logfile |
✘ | 8R34 | 18860 | 2024-07-19 | 2023-11-08 | 2.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7762 | 970 | 6 | 0 | 14 | 62 | 0 | logfile |
✔ | 8R35 | 18861 | 2024-07-19 | 2023-11-08 | 3.12 | 3.46 | 3.18 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 16.59 | 0.00 | 2.214 | 6.87 | 0.90 | 2.4 | 97.6 | 0.0 | 1.44 | 0.68 | 0.87 | 1.80 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.76 | 0.00 | 2.246 | 6.87 | 3.35 | 2.6 | 97.4 | 0.0 | 2.27 | 0.28 | 0.67 | 0.87 | 1.74 | 7150 | 953 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8X16 | 37985 | 2024-07-19 | 2023-11-06 | 3.29 | 3.58 | 3.36 | 3.7 | 0.005 | 0.53 | 0.0 | 0.04 | 8.10 | 0.00 | 2.203 | 8.34 | 0.32 | 2.0 | 97.9 | 0.1 | -1.18 | 0.56 | 0.60 | 1.26 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.72 | 0.00 | 2.022 | 12.37 | 2.67 | 3.5 | 96.5 | 0.0 | 0.58 | 1.18 | 0.63 | 0.78 | 1.66 | 8751 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8R2i | 18848 | 2024-07-23 | 2023-11-06 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2H | 18842 | 2024-07-20 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.003 | 0.58 | 0.0 | 0.04 | 14.00 | 0.00 | 1.931 | 11.81 | 1.96 | 2.1 | 97.9 | 0.0 | 0.09 | 0.37 | 0.75 | 0.72 | 3.17 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 8UW3 | 42637 | 2024-07-20 | 2023-11-06 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12005 | 1265 | 4 | 73 | 1 | 0 | 0 | logfile |
✘ | 8X17 | 37986 | 2024-07-19 | 2023-11-06 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2024-07-19 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.26 | 0.00 | 2.039 | 3.35 | 2.74 | 2.5 | 97.5 | 0.0 | 1.56 | 1.05 | 0.83 | 0.85 | 3.55 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2024-07-20 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 16.28 | 0.00 | 2.215 | 9.10 | 2.65 | 5.6 | 94.4 | 0.0 | 2.23 | 0.25 | 0.64 | 0.82 | 3.10 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |