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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8Ki3 | 37251 | 2024-07-27 | 2023-08-22 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38662 | 5047 | 34 | 0 | 11 | 0 | 0 | logfile |
✔ | 8TX1 | 41674 | 2024-07-21 | 2023-08-22 | 3.62 | 4.05 | 3.79 | 3.4 | 0.006 | 0.92 | 0.0 | 0.04 | 15.94 | 0.01 | 2.136 | 12.74 | 0.20 | 6.6 | 93.2 | 0.2 | 0.18 | 0.34 | 0.51 | 0.26 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 16.28 | 0.01 | 2.132 | 14.89 | 3.29 | 8.7 | 91.0 | 0.3 | -1.13 | 1.49 | 0.35 | 0.54 | 0.65 | 13687 | 1894 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KHR | 37249 | 2024-07-21 | 2023-08-22 | 3.25 | 3.87 | 3.24 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.93 | 0.00 | 2.125 | 8.14 | 0.62 | 7.9 | 92.1 | 0.0 | -1.23 | 0.81 | 0.78 | 2.40 | 3.7 | 0.005 | 0.66 | 0.0 | 0.04 | 17.03 | 0.00 | 2.075 | 10.62 | 5.57 | 12.2 | 87.8 | 0.0 | -1.50 | 0.38 | 0.84 | 0.84 | 2.12 | 8320 | 1138 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KHP | 37247 | 2024-07-21 | 2023-08-22 | 3.67 | 4.90 | 3.71 | 3.6 | 0.002 | 0.62 | 0.0 | 0.04 | 11.29 | 0.00 | 2.213 | 5.29 | 0.00 | 3.2 | 96.3 | 0.4 | 1.44 | 0.86 | 0.80 | 1.59 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 12.90 | 0.00 | 2.176 | 7.22 | 0.78 | 5.0 | 94.8 | 0.1 | 1.48 | 1.28 | 0.89 | 0.87 | 1.22 | 16023 | 2702 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QA4 | 18298 | 2024-07-19 | 2023-08-22 | 2.8 | 2.99 | 2.83 | 3.0 | 0.023 | 2.29 | 24.0 | 0.20 | 15.90 | 0.01 | 2.296 | 3.62 | 1.45 | 3.5 | 96.5 | 0.0 | -2.38 | 0.63 | 0.78 | 3.60 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.77 | 0.00 | 1.870 | 9.12 | 1.69 | 2.2 | 97.8 | 0.0 | -0.07 | 1.46 | 0.60 | 0.80 | 2.33 | 7544 | 462 | 6 | 0 | 0 | 28 | 3724 | logfile |
✔ | 8QA6 | 18300 | 2024-07-22 | 2023-08-22 | 2.91 | 3.22 | 3.02 | 3.2 | 0.010 | 1.08 | 0.0 | 0.10 | 17.51 | 0.01 | 2.072 | 6.69 | 0.52 | 3.4 | 96.6 | 0.0 | -0.54 | 0.60 | 0.80 | 3.35 | 3.2 | 0.004 | 0.59 | 0.0 | 0.04 | 17.56 | 0.00 | 2.082 | 7.69 | 1.66 | 2.6 | 97.4 | 0.0 | 1.86 | 0.71 | 0.61 | 0.81 | 3.27 | 17808 | 1106 | 4 | 0 | 6 | 0 | 8720 | logfile |
✔ | 8QA5 | 18299 | 2024-07-20 | 2023-08-22 | 3.14 | 3.29 | 3.20 | 3.3 | 0.016 | 1.94 | 17.0 | 0.17 | 15.49 | 0.01 | 2.267 | 2.48 | 1.48 | 4.7 | 95.1 | 0.1 | -0.88 | 0.61 | 0.65 | 2.67 | 3.3 | 0.004 | 0.67 | 0.0 | 0.04 | 15.64 | 0.00 | 1.788 | 12.81 | 2.33 | 7.5 | 92.5 | 0.0 | 0.47 | 1.19 | 0.64 | 0.70 | 1.33 | 10376 | 814 | 4 | 0 | 1 | 0 | 4809 | logfile |
✔ | 8KHD | 37241 | 2024-07-18 | 2023-08-21 | 3.5 | 3.86 | 4.16 | 3.8 | 0.004 | 0.88 | 0.0 | 0.05 | 13.42 | 0.01 | 2.287 | 8.30 | 0.00 | 7.3 | 92.5 | 0.2 | -1.39 | 0.52 | 0.71 | 1.83 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 15.64 | 0.00 | 2.162 | 15.21 | 4.76 | 9.4 | 90.4 | 0.2 | -1.19 | 0.58 | 0.53 | 0.73 | 1.49 | 3337 | 434 | 4 | 0 | 1 | 0 | 0 | logfile |
✘ | 8KHF | 37243 | 2024-07-20 | 2023-08-21 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12128 | 1596 | 20 | 0 | 1 | 0 | 0 | logfile |
✔ | 8KHC | 37240 | 2024-07-24 | 2023-08-21 | 3.0 | 3.26 | 3.11 | 3.2 | 0.003 | 0.61 | 0.0 | 0.05 | 12.78 | 0.00 | 2.136 | 6.34 | 0.04 | 3.8 | 96.2 | 0.1 | 0.04 | 0.60 | 0.59 | 2.62 | 3.2 | 0.004 | 0.63 | 0.0 | 0.05 | 14.40 | 0.00 | 2.146 | 8.08 | 2.25 | 4.7 | 95.2 | 0.1 | -0.22 | 1.29 | 0.71 | 0.82 | 2.53 | 27173 | 3528 | 18 | 0 | 40 | 58 | 0 | logfile |
✔ | 8Q9T | 18288 | 2024-07-23 | 2023-08-21 | 2.84 | 3.06 | 2.88 | 3.0 | 0.003 | 0.47 | 0.0 | 0.04 | 13.30 | 0.00 | 2.200 | 3.21 | 0.00 | 2.4 | 97.6 | 0.0 | 1.09 | 0.66 | 0.82 | 3.48 | 3.0 | 0.002 | 0.47 | 0.0 | 0.04 | 15.11 | 0.00 | 2.228 | 3.89 | 0.80 | 2.1 | 97.9 | 0.0 | 1.59 | 0.25 | 0.76 | 0.88 | 2.81 | 20927 | 2809 | 5 | 4 | 0 | 0 | 0 | logfile |
✘ | 8TWi | 41668 | 2024-07-19 | 2023-08-21 | 2.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8096 | 510 | 4 | 0 | 2 | 0 | 4023 | logfile |
✔ | 8TWE | 41667 | 2024-07-21 | 2023-08-21 | 2.55 | 3.04 | 2.52 | 2.9 | 0.003 | 0.48 | 0.0 | 0.04 | 10.13 | 0.00 | 1.425 | 1.05 | 0.13 | 0.5 | 99.5 | 0.0 | 1.05 | 0.76 | 0.87 | 5.13 | 2.9 | 0.003 | 0.50 | 0.0 | 0.04 | 13.24 | 0.00 | 2.105 | 2.78 | 0.27 | 1.3 | 98.7 | 0.0 | 1.07 | 0.81 | 0.76 | 0.89 | 4.73 | 13319 | 833 | 4 | 0 | 0 | 0 | 6636 | logfile |
✔ | 8KH5 | 37237 | 2024-07-19 | 2023-08-21 | 2.83 | 3.13 | 2.90 | 3.2 | 0.008 | 0.85 | 1.0 | 0.08 | 12.85 | 0.01 | 2.103 | 11.08 | 0.26 | 2.9 | 97.1 | 0.0 | 0.90 | 0.59 | 0.74 | 3.40 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.19 | 0.00 | 2.139 | 10.36 | 1.80 | 1.9 | 98.1 | 0.0 | 1.34 | 1.24 | 0.61 | 0.79 | 3.53 | 7838 | 1031 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TWV | 41672 | 2024-07-20 | 2023-08-21 | 3.4 | 3.51 | 3.33 | 3.5 | 0.004 | 0.73 | 0.0 | 0.05 | 15.80 | 0.01 | 2.244 | 11.78 | 0.07 | 4.9 | 95.1 | 0.0 | -1.53 | 0.66 | 0.83 | 2.48 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 16.51 | 0.00 | 2.172 | 5.50 | 3.39 | 4.7 | 95.3 | 0.0 | 0.28 | 0.41 | 0.71 | 0.86 | 2.24 | 12720 | 1550 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 8TWZ | 41673 | 2024-07-20 | 2023-08-21 | 3.17 | 3.17 | 3.11 | 3.2 | 0.004 | 0.71 | 0.0 | 0.05 | 14.02 | 0.01 | 2.309 | 5.99 | 0.00 | 7.6 | 92.4 | 0.0 | -0.87 | 0.68 | 0.82 | 3.33 | 3.2 | 0.003 | 0.55 | 0.0 | 0.05 | 15.04 | 0.00 | 2.223 | 6.53 | 2.74 | 6.2 | 93.8 | 0.0 | -0.21 | 0.40 | 0.65 | 0.83 | 3.64 | 11270 | 1370 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 8KH4 | 37236 | 2024-07-19 | 2023-08-21 | 3.1 | 3.38 | 3.16 | 3.4 | 0.009 | 1.01 | 9.0 | 0.08 | 14.02 | 0.01 | 2.049 | 16.56 | 0.40 | 2.8 | 97.2 | 0.0 | 0.62 | 0.59 | 0.72 | 2.53 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 15.25 | 0.00 | 2.136 | 12.19 | 2.69 | 2.4 | 97.6 | 0.0 | 1.18 | 1.58 | 0.63 | 0.75 | 2.17 | 7521 | 1001 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8Q9A | 18273 | 2024-07-19 | 2023-08-20 | 3.04 | 3.03 | 3.02 | 3.2 | 0.011 | 1.80 | 1.0 | 0.09 | 13.06 | 0.01 | 2.499 | 0.00 | 0.75 | 2.9 | 97.1 | 0.0 | -1.88 | 0.32 | 0.78 | 5.56 | 3.1 | 0.003 | 0.54 | 0.0 | 0.05 | 14.84 | 0.00 | 2.006 | 3.64 | 2.01 | 2.0 | 98.0 | 0.0 | -1.30 | 2.80 | 0.37 | 0.87 | 5.76 | 7140 | 462 | 6 | 0 | 0 | 0 | 3633 | logfile |
✔ | 8Q9F | 18279 | 2024-07-19 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.003 | 0.62 | 0.0 | 0.05 | 14.82 | 0.00 | 2.068 | 3.45 | 0.56 | 2.2 | 97.8 | 0.0 | -2.05 | 1.20 | 0.43 | 0.86 | 7.13 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 8Q9B | 18275 | 2024-07-19 | 2023-08-20 | 3.1 | 3.13 | 2.97 | 3.1 | 0.011 | 1.79 | 0.0 | 0.08 | 10.91 | 0.01 | 2.521 | 0.00 | 0.00 | 4.1 | 95.9 | 0.0 | -1.61 | 0.35 | 0.78 | 6.63 | 3.1 | 0.002 | 0.48 | 0.0 | 0.05 | 14.65 | 0.00 | 2.367 | 1.57 | 1.52 | 0.2 | 99.8 | 0.0 | -0.77 | 1.30 | 0.38 | 0.86 | 6.29 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |