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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8TLD | 41367 | 2024-07-19 | 2023-07-26 | 3.6 | 2.48 | 3.50 | 2.2 | 0.005 | 0.73 | 0.0 | 0.04 | 17.43 | 0.01 | 2.181 | 12.14 | 0.60 | 3.8 | 95.8 | 0.4 | -0.17 | 0.71 | 0.67 | 1.19 | 2.2 | 0.003 | 0.65 | 0.0 | 0.04 | 17.77 | 0.00 | 2.196 | 12.98 | 4.22 | 3.2 | 96.4 | 0.4 | 0.10 | 0.33 | 0.72 | 0.69 | 1.09 | 5982 | 731 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 8K7C | 36938 | 2024-07-20 | 2023-07-26 | 3.9 | 4.56 | 4.09 | 4.5 | 0.009 | 0.96 | 0.0 | 0.05 | 13.87 | 0.01 | 1.837 | 13.49 | 0.21 | 8.8 | 91.2 | 0.0 | -1.19 | 0.66 | 0.84 | 2.01 | 4.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.43 | 0.00 | 1.941 | 7.04 | 2.87 | 5.5 | 94.5 | 0.0 | 0.73 | 0.44 | 0.61 | 0.80 | 1.69 | 9271 | 1174 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8K77 | 36935 | 2024-07-19 | 2023-07-26 | 3.11 | 3.30 | — | 3.4 | 0.008 | 0.99 | 0.0 | 0.05 | 16.52 | 0.00 | 2.160 | 9.40 | 0.00 | 3.3 | 96.7 | 0.0 | 0.80 | 0.60 | 0.79 | 2.09 | 3.4 | 0.004 | 0.89 | 1.0 | 0.04 | 16.63 | 0.00 | 2.074 | 6.88 | 3.41 | 2.9 | 97.1 | 0.0 | 1.20 | 0.39 | 0.60 | 0.81 | 2.34 | 8192 | 1012 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 8K6L | 36922 | 2024-07-18 | 2023-07-25 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4155 | 547 | 3 | 0 | 4 | 0 | 0 | logfile |
✘ | 8K66 | 36918 | 2024-07-19 | 2023-07-25 | 2.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7620 | 886 | 6 | 0 | 16 | 130 | 0 | logfile |
✘ | 8K69 | 36919 | 2024-07-19 | 2023-07-25 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7744 | 916 | 6 | 0 | 18 | 126 | 0 | logfile |
✔ | 8TK1 | 41321 | 2024-07-23 | 2023-07-25 | 2.98 | 2.28 | 3.01 | 2.0 | 0.003 | 0.54 | 0.0 | 0.04 | 13.82 | 0.00 | 2.031 | 3.43 | 0.08 | 3.9 | 96.1 | 0.0 | -0.10 | 0.78 | 0.76 | 2.95 | 2.0 | 0.005 | 0.65 | 0.0 | 0.04 | 17.03 | 0.00 | 2.142 | 5.51 | 2.51 | 4.5 | 95.5 | 0.0 | 0.21 | 1.31 | 0.77 | 0.80 | 3.06 | 23424 | 2877 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8K6K | 36921 | 2024-07-19 | 2023-07-25 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8593 | 1088 | 5 | 0 | 6 | 0 | 0 | logfile |
✘ | 8K6J | 36920 | 2024-07-19 | 2023-07-25 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8580 | 1087 | 5 | 0 | 6 | 0 | 0 | logfile |
✘ | 8TKP | 41356 | 2024-07-21 | 2023-07-25 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14666 | 1698 | 14 | 0 | 54 | 0 | 0 | logfile |
✔ | 8TJY | 41314 | 2024-07-23 | 2023-07-24 | 2.79 | 2.20 | 2.81 | 2.0 | 0.003 | 0.47 | 0.0 | 0.04 | 13.84 | 0.00 | 2.031 | 3.34 | 0.00 | 4.0 | 96.0 | 0.0 | -0.10 | 0.81 | 0.79 | 2.98 | 2.0 | 0.003 | 0.57 | 0.0 | 0.04 | 17.26 | 0.00 | 2.194 | 5.45 | 1.59 | 3.8 | 96.2 | 0.0 | 0.24 | 3.60 | 0.81 | 0.82 | 2.88 | 22692 | 2788 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TJQ | 41308 | 2024-07-20 | 2023-07-24 | 3.4 | 4.09 | 3.45 | 3.4 | 0.005 | 0.63 | 0.0 | 0.03 | 24.84 | 0.00 | 1.883 | 19.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.85 | — | 3.4 | 0.008 | 0.76 | 0.0 | 0.04 | 24.61 | 0.01 | 1.817 | 25.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.92 | 0.90 | — | 9296 | 0 | 2 | 433 | 28 | 0 | 0 | logfile |
✔ | 8TJU | 41311 | 2024-07-20 | 2023-07-24 | 3.46 | 4.75 | 3.48 | 3.4 | 0.006 | 0.67 | 0.0 | 0.04 | 25.59 | 0.01 | 1.874 | 27.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.86 | — | 3.4 | 0.008 | 0.70 | 0.0 | 0.04 | 24.91 | 0.01 | 1.784 | 28.62 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.94 | 0.91 | — | 8771 | 0 | 2 | 409 | 27 | 0 | 0 | logfile |
✔ | 8TJX | 41313 | 2024-07-19 | 2023-07-24 | 2.44 | 3.10 | 2.65 | 2.9 | 0.006 | 0.64 | 0.0 | 0.04 | 24.81 | 0.01 | 1.872 | 12.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.85 | — | 2.9 | 0.007 | 0.61 | 0.0 | 0.04 | 24.05 | 0.01 | 1.838 | 11.39 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.84 | 0.86 | — | 7839 | 0 | 2 | 365 | 27 | 0 | 0 | logfile |
✔ | 8TJV | 41312 | 2024-07-20 | 2023-07-24 | 2.99 | 3.53 | 2.99 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 24.19 | 0.00 | 1.526 | 10.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.89 | — | 3.1 | 0.008 | 0.70 | 0.0 | 0.04 | 23.53 | 0.01 | 1.086 | 12.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.92 | 0.92 | — | 8778 | 0 | 2 | 409 | 32 | 0 | 0 | logfile |
✔ | 8K5B | 36900 | 2024-07-18 | 2023-07-21 | 3.43 | 3.67 | 3.31 | 3.6 | 0.004 | 0.72 | 0.0 | 0.05 | 17.22 | 0.00 | 2.213 | 12.54 | 1.18 | 5.5 | 94.5 | 0.0 | 0.37 | 0.48 | 0.77 | 1.68 | 3.6 | 0.003 | 0.69 | 0.0 | 0.05 | 17.90 | 0.00 | 2.221 | 12.96 | 9.45 | 5.9 | 94.1 | 0.0 | 0.74 | 0.29 | 0.49 | 0.78 | 1.78 | 2374 | 291 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8K53 | 36896 | 2024-07-20 | 2023-07-21 | 3.8 | 3.95 | 3.74 | 3.9 | 0.003 | 0.63 | 0.0 | 0.05 | 15.22 | 0.00 | 2.149 | 6.63 | 0.18 | 4.8 | 95.1 | 0.1 | 0.04 | 0.73 | 0.71 | 1.11 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 14.75 | 0.00 | 2.233 | 7.01 | 3.28 | 5.0 | 94.9 | 0.1 | 0.28 | 0.98 | 0.73 | 0.71 | 1.08 | 10602 | 1350 | 8 | 0 | 12 | 0 | 0 | logfile |
✘ | 8K5D | 36902 | 2024-07-18 | 2023-07-21 | 3.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2345 | 291 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8K5H | 36906 | 2024-07-24 | 2023-07-21 | 3.22 | 3.62 | 3.18 | 3.4 | 0.012 | 0.97 | 0.0 | 0.06 | 16.11 | 0.01 | 1.977 | 13.89 | 0.14 | 8.9 | 91.1 | 0.0 | -1.87 | 0.84 | 0.84 | 2.15 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 16.25 | 0.00 | 2.152 | 7.88 | 2.27 | 4.7 | 95.3 | 0.0 | -0.44 | 0.51 | 0.85 | 0.88 | 1.96 | 25502 | 3171 | 16 | 0 | 50 | 0 | 0 | logfile |
✔ | 8K5G | 36905 | 2024-07-18 | 2023-07-21 | 3.41 | 3.86 | 3.38 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 13.67 | 0.00 | 2.235 | 6.18 | 0.00 | 8.0 | 91.8 | 0.2 | -2.07 | 0.68 | 0.85 | 2.82 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.34 | 0.00 | 2.229 | 6.48 | 3.00 | 7.1 | 92.7 | 0.2 | -1.49 | 1.45 | 0.64 | 0.86 | 2.61 | 3381 | 431 | 3 | 0 | 0 | 0 | 0 | logfile |