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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8PS1 | 17842 | 2024-07-25 | 2023-07-13 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29787 | 3781 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 8PSG | 17852 | 2024-07-25 | 2023-07-13 | 3.7 | 3.67 | 3.55 | 3.3 | 0.014 | 1.89 | 0.0 | 0.09 | 14.86 | 0.01 | 2.169 | 5.38 | 0.65 | 7.3 | 92.4 | 0.3 | -3.71 | 0.73 | 0.84 | 2.35 | 3.3 | 0.002 | 0.60 | 0.0 | 0.04 | 15.83 | 0.00 | 2.134 | 10.40 | 0.89 | 3.0 | 97.0 | 0.0 | 0.52 | 1.14 | 0.73 | 0.82 | 2.01 | 29610 | 3777 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PR3 | 17833 | 2024-07-22 | 2023-07-12 | 3.9 | 4.21 | 3.80 | 4.0 | 0.006 | 1.08 | 0.0 | 0.05 | 17.80 | 0.01 | 2.278 | 6.13 | 0.67 | 3.0 | 96.9 | 0.0 | -1.20 | 0.80 | 0.83 | 1.45 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 17.99 | 0.00 | 2.134 | 13.03 | 2.93 | 2.8 | 97.2 | 0.0 | 1.33 | 0.43 | 0.80 | 0.84 | 1.38 | 17888 | 2221 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PR2 | 17832 | 2024-07-21 | 2023-07-12 | 3.8 | 3.87 | 3.70 | 3.9 | 0.005 | 1.03 | 0.0 | 0.05 | 18.62 | 0.01 | 1.770 | 5.14 | 0.74 | 2.5 | 97.4 | 0.1 | -0.80 | 0.74 | 0.81 | 1.58 | 3.9 | 0.004 | 0.94 | 0.0 | 0.04 | 18.87 | 0.00 | 2.172 | 11.58 | 3.14 | 2.0 | 97.9 | 0.1 | 2.65 | 0.41 | 0.75 | 0.83 | 1.51 | 14906 | 1816 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PR4 | 17834 | 2024-07-20 | 2023-07-12 | 3.5 | 4.03 | 3.51 | 3.8 | 0.008 | 1.33 | 0.0 | 0.07 | 17.21 | 0.01 | 2.309 | 4.25 | 1.00 | 7.5 | 92.4 | 0.2 | -3.40 | 0.81 | 0.80 | 1.91 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.41 | 0.00 | 2.136 | 9.59 | 4.35 | 5.2 | 94.8 | 0.0 | 0.31 | 0.40 | 0.82 | 0.82 | 1.59 | 9494 | 1322 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8TGH | 41236 | 2024-07-19 | 2023-07-12 | 3.5 | 2.39 | 3.45 | 2.2 | 0.007 | 0.81 | 0.0 | 0.05 | 17.21 | 0.01 | 2.269 | 16.16 | 0.98 | 2.5 | 97.5 | 0.0 | 0.62 | 0.79 | 0.82 | 2.22 | 2.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.29 | 0.01 | 2.205 | 5.02 | 3.74 | 2.4 | 97.6 | 0.0 | 2.21 | 0.74 | 0.78 | 0.79 | 2.03 | 5778 | 767 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGi | 41237 | 2024-07-19 | 2023-07-12 | 3.4 | 2.43 | 3.43 | 2.2 | 0.004 | 0.76 | 0.0 | 0.05 | 18.04 | 0.01 | 2.208 | 22.01 | 0.81 | 1.1 | 98.9 | 0.0 | 0.60 | 0.74 | 0.75 | 1.85 | 2.2 | 0.004 | 0.72 | 0.0 | 0.05 | 16.70 | 0.00 | 2.189 | 9.94 | 3.57 | 1.7 | 98.3 | 0.0 | 1.90 | 0.76 | 0.75 | 0.76 | 1.70 | 5786 | 767 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGM | 41241 | 2024-07-19 | 2023-07-12 | 3.5 | 2.42 | 3.47 | 2.2 | 0.007 | 0.97 | 1.0 | 0.05 | 17.99 | 0.01 | 2.279 | 14.16 | 0.65 | 3.0 | 96.8 | 0.1 | 0.63 | 0.77 | 0.80 | 2.24 | 2.2 | 0.004 | 0.69 | 0.0 | 0.04 | 16.77 | 0.01 | 2.268 | 6.45 | 3.91 | 2.6 | 97.4 | 0.0 | 1.84 | 0.36 | 0.78 | 0.78 | 1.66 | 5826 | 768 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGN | 41242 | 2024-07-19 | 2023-07-12 | 3.3 | 2.50 | 3.28 | 2.9 | 0.005 | 0.97 | 0.0 | 0.05 | 18.68 | 0.01 | 2.195 | 28.85 | 0.49 | 1.3 | 98.5 | 0.1 | 0.16 | 0.71 | 0.73 | 1.69 | 2.9 | 0.003 | 0.77 | 0.0 | 0.04 | 17.60 | 0.01 | 2.166 | 12.58 | 3.43 | 1.9 | 98.1 | 0.0 | 1.51 | 0.38 | 0.71 | 0.72 | 1.52 | 5745 | 761 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8PQY | 17828 | 2024-07-25 | 2023-07-12 | 3.8 | 3.66 | 3.89 | 2.8 | 0.004 | 0.89 | 0.0 | 0.05 | 17.21 | 0.01 | 1.902 | 5.70 | 0.36 | 3.8 | 96.2 | 0.0 | -1.91 | 0.84 | 0.74 | 1.03 | 2.8 | 0.003 | 0.62 | 0.0 | 0.04 | 17.59 | 0.00 | 1.956 | 13.93 | 3.25 | 3.7 | 96.3 | 0.0 | 0.57 | 0.41 | 0.84 | 0.76 | 0.95 | 27916 | 3518 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PQW | 17826 | 2024-07-26 | 2023-07-12 | 4.2 | 4.43 | 4.16 | 3.5 | 0.004 | 0.86 | 0.0 | 0.05 | 14.74 | 0.01 | 1.844 | 6.08 | 0.03 | 3.5 | 96.5 | 0.0 | -1.66 | 0.84 | 0.76 | — | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 14.41 | 0.00 | 1.975 | 10.92 | 0.00 | 3.0 | 97.0 | 0.0 | 1.78 | 0.35 | 0.84 | 0.77 | — | 30491 | 4035 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PQX | 17827 | 2024-07-26 | 2023-07-12 | 3.3 | 2.94 | 3.21 | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.11 | 0.00 | 0.565 | 12.48 | 0.00 | 8.1 | 91.9 | 0.0 | -0.72 | 0.55 | 0.53 | 1.73 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.46 | 0.00 | 2.150 | 15.00 | 2.25 | 5.4 | 94.6 | 0.0 | -0.40 | 1.36 | 0.71 | 0.76 | 1.42 | 32038 | 4476 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 8TGL | 41240 | 2024-07-19 | 2023-07-12 | 3.4 | 2.34 | 3.39 | 3.3 | 0.005 | 0.80 | 0.0 | 0.04 | 17.87 | 0.01 | 2.218 | 30.23 | 0.82 | 1.7 | 98.1 | 0.1 | 1.90 | 0.73 | 0.71 | 2.60 | 3.3 | 0.004 | 0.74 | 0.0 | 0.04 | 16.44 | 0.01 | 2.165 | 12.16 | 3.93 | 2.4 | 97.6 | 0.0 | 1.46 | 0.95 | 0.74 | 0.74 | 2.65 | 5734 | 760 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGJ | 41238 | 2024-07-19 | 2023-07-12 | 3.5 | 2.56 | 3.51 | 2.9 | 0.004 | 0.78 | 0.0 | 0.05 | 18.01 | 0.01 | 2.292 | 25.32 | 0.66 | 1.6 | 98.4 | 0.0 | 0.58 | 0.71 | 0.72 | 1.85 | 2.9 | 0.003 | 0.71 | 0.0 | 0.04 | 17.04 | 0.01 | 2.106 | 9.70 | 4.92 | 2.0 | 98.0 | 0.0 | 1.54 | 0.38 | 0.72 | 0.72 | 1.30 | 5720 | 761 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8TGG | 41235 | 2024-07-19 | 2023-07-12 | 3.6 | 2.40 | 3.59 | 2.2 | 0.006 | 0.86 | 0.0 | 0.05 | 18.10 | 0.01 | 2.212 | 22.24 | 0.49 | 2.0 | 97.9 | 0.1 | 0.53 | 0.72 | 0.72 | 1.84 | 2.2 | 0.005 | 0.70 | 0.0 | 0.04 | 16.99 | 0.01 | 2.257 | 8.71 | 4.93 | 2.5 | 97.5 | 0.0 | 1.84 | 0.98 | 0.73 | 0.73 | 1.56 | 5717 | 758 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGK | 41239 | 2024-07-19 | 2023-07-12 | 3.7 | 2.41 | 3.64 | 2.2 | 0.005 | 0.87 | 1.0 | 0.05 | 17.76 | 0.01 | 2.204 | 20.27 | 0.81 | 1.7 | 97.6 | 0.7 | 0.74 | 0.76 | 0.78 | 1.52 | 2.2 | 0.003 | 0.69 | 0.0 | 0.04 | 16.58 | 0.01 | 2.260 | 7.58 | 4.39 | 2.9 | 97.1 | 0.0 | 1.79 | 0.98 | 0.77 | 0.76 | 2.06 | 5772 | 766 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8PQV | 17825 | 2024-07-24 | 2023-07-12 | 4.0 | 3.78 | 3.91 | 3.6 | 0.005 | 0.88 | 0.0 | 0.05 | 18.62 | 0.01 | 2.216 | 5.82 | 0.53 | 3.0 | 96.9 | 0.1 | -1.33 | 0.83 | 0.80 | — | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 18.55 | 0.00 | 2.169 | 10.43 | 3.30 | 2.7 | 97.3 | 0.0 | 1.84 | 1.11 | 0.83 | 0.80 | — | 24122 | 2996 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8K1Z | 36806 | 2024-07-18 | 2023-07-11 | 3.41 | 3.55 | 3.06 | 3.6 | 0.002 | 0.42 | 0.0 | 0.03 | 13.66 | 0.00 | 2.241 | 4.01 | 0.00 | 1.1 | 98.9 | 0.0 | 5.04 | 0.60 | 0.77 | 1.90 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 15.58 | 0.00 | 2.160 | 6.32 | 3.43 | 2.3 | 97.7 | 0.0 | 4.42 | 1.36 | 0.63 | 0.83 | 1.56 | 4059 | 484 | 6 | 0 | 11 | 2 | 0 | logfile |
✘ | 8K1U | 36804 | 2024-07-24 | 2023-07-11 | 2.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26964 | 3446 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8K1V | 36805 | 2024-07-18 | 2023-07-11 | 3.48 | 3.80 | 3.32 | 3.9 | 0.001 | 0.31 | 0.0 | 0.03 | 13.71 | 0.00 | 2.283 | 2.43 | 0.00 | 0.6 | 99.4 | 0.0 | 5.96 | 0.54 | 0.76 | 1.54 | 3.9 | 0.004 | 0.55 | 0.0 | 0.04 | 14.99 | 0.00 | 2.166 | 6.20 | 4.66 | 1.7 | 98.3 | 0.0 | 4.64 | 0.78 | 0.54 | 0.79 | 2.36 | 4059 | 484 | 6 | 0 | 11 | 2 | 0 | logfile |