The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8PoG | 17791 | 2024-07-19 | 2023-07-04 | 4.15 | 4.36 | 4.10 | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.83 | 0.01 | 2.242 | 5.44 | 0.00 | 2.3 | 97.7 | 0.0 | 0.40 | 0.77 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4964 | 624 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TDN | 41171 | 2024-07-18 | 2023-07-04 | 3.1 | 3.48 | 2.78 | 3.4 | 0.004 | 0.54 | 0.0 | 0.05 | 15.57 | 0.00 | 2.270 | 9.57 | 0.00 | 7.9 | 92.1 | 0.0 | -2.86 | 0.59 | 0.86 | 5.30 | 3.4 | 0.003 | 0.54 | 0.0 | 0.05 | 15.44 | 0.00 | 2.222 | 8.74 | 2.53 | 8.3 | 91.7 | 0.0 | -3.06 | 0.36 | 0.59 | 0.87 | 5.60 | 3620 | 465 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JZ7 | 36736 | 2024-07-19 | 2023-07-04 | 2.6 | 2.26 | — | 1.9 | 0.006 | 0.85 | 0.0 | 0.05 | 13.85 | 0.01 | 2.197 | 15.42 | 0.61 | 7.0 | 93.0 | 0.0 | -2.16 | 0.75 | 0.73 | 2.54 | 1.9 | 0.003 | 0.71 | 0.0 | 0.04 | 16.53 | 0.00 | 2.134 | 11.36 | 2.64 | 5.3 | 94.7 | 0.0 | -0.91 | 0.49 | 0.76 | 0.75 | 2.01 | 9042 | 1144 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PoE | 17789 | 2024-07-20 | 2023-07-04 | 4.2 | 4.40 | 4.17 | 4.5 | 0.003 | 0.64 | 0.0 | 0.04 | 14.20 | 0.00 | 2.265 | 9.34 | 0.00 | 2.8 | 97.2 | 0.0 | 1.48 | 0.57 | 0.71 | — | 4.5 | 0.002 | 0.61 | 0.0 | 0.04 | 14.54 | 0.00 | 2.226 | 7.81 | 0.00 | 2.7 | 97.3 | 0.0 | 1.46 | 1.15 | 0.57 | 0.72 | — | 10947 | 1371 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PoC | 17788 | 2024-07-18 | 2023-07-04 | 4.0 | 4.12 | 3.87 | 4.1 | 0.003 | 0.67 | 0.0 | 0.03 | 14.86 | 0.00 | 2.324 | 6.38 | 0.00 | 3.0 | 97.0 | 0.0 | 2.14 | 0.77 | 0.81 | — | 4.1 | 0.003 | 0.59 | 0.0 | 0.03 | 17.66 | 0.00 | 2.263 | 7.20 | 4.23 | 2.1 | 97.9 | 0.0 | 3.03 | 1.42 | 0.77 | 0.82 | — | 4924 | 616 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PoH | 17792 | 2024-07-23 | 2023-07-04 | 3.3 | 3.52 | 3.34 | 3.5 | 0.003 | 0.56 | 0.0 | 0.04 | 18.79 | 0.00 | 2.001 | 6.79 | 2.37 | 3.1 | 96.9 | 0.0 | 0.11 | 0.69 | 0.80 | 2.24 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 18.75 | 0.00 | 1.969 | 6.40 | 3.23 | 2.8 | 97.2 | 0.0 | 0.55 | 0.35 | 0.77 | 0.84 | 2.13 | 20729 | 2479 | 11 | 38 | 1 | 0 | 0 | logfile |
✔ | 8TDo | 41172 | 2024-07-18 | 2023-07-04 | 3.1 | 3.56 | 2.70 | 3.5 | 0.005 | 0.56 | 0.0 | 0.05 | 13.25 | 0.01 | 2.175 | 16.36 | 0.00 | 3.4 | 96.6 | 0.0 | -3.41 | 0.50 | 0.84 | 5.15 | 3.4 | 0.006 | 0.58 | 0.0 | 0.05 | 14.92 | 0.00 | 2.220 | 12.88 | 2.53 | 4.8 | 95.2 | 0.0 | -3.57 | 0.33 | 0.51 | 0.84 | 5.08 | 2892 | 372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JYN | 36727 | 2024-07-26 | 2023-07-03 | 3.04 | 3.39 | 3.01 | 3.2 | 0.003 | 0.54 | 0.0 | 0.05 | 13.71 | 0.00 | 2.203 | 4.51 | 0.00 | 3.7 | 96.3 | 0.0 | 0.42 | 0.80 | 0.83 | 2.17 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 13.83 | 0.00 | 2.199 | 6.09 | 0.83 | 3.1 | 96.8 | 0.0 | 0.57 | 0.52 | 0.82 | 0.87 | 2.06 | 29000 | 3577 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 8JYM | 36726 | 2024-07-24 | 2023-07-03 | 2.79 | 3.39 | 2.76 | 3.2 | 0.004 | 0.55 | 0.0 | 0.05 | 12.78 | 0.00 | 0.546 | 6.93 | 0.00 | 3.6 | 96.4 | 0.0 | 0.19 | 0.83 | 0.85 | 3.31 | 3.2 | 0.004 | 0.54 | 0.0 | 0.04 | 13.97 | 0.00 | 2.186 | 5.30 | 0.66 | 3.5 | 96.5 | 0.0 | 0.24 | 0.36 | 0.85 | 0.88 | 3.11 | 24924 | 3099 | 12 | 0 | 48 | 0 | 0 | logfile |
✔ | 8JYP | 36729 | 2024-07-20 | 2023-07-03 | 3.38 | 4.15 | 3.49 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 14.64 | 0.00 | 2.291 | 5.18 | 0.00 | 2.5 | 97.5 | 0.0 | 0.39 | 0.84 | 0.84 | 2.35 | 3.8 | 0.003 | 0.57 | 0.0 | 0.04 | 13.36 | 0.00 | 2.248 | 7.73 | 1.58 | 2.7 | 97.3 | 0.0 | 1.02 | 1.06 | 0.84 | 0.85 | 2.48 | 6627 | 795 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 8JY8 | 36723 | 2024-07-19 | 2023-07-03 | 2.45 | 2.34 | 2.57 | 2.4 | 0.005 | 0.69 | 0.0 | 0.04 | 17.05 | 0.01 | 2.343 | 7.64 | 1.65 | 2.1 | 97.9 | 0.0 | 0.01 | 0.60 | 0.75 | 3.63 | 2.4 | 0.003 | 0.64 | 0.0 | 0.04 | 16.92 | 0.01 | 2.398 | 7.78 | 1.65 | 2.9 | 97.1 | 0.0 | 1.76 | 0.49 | 0.68 | 0.81 | 4.43 | 7392 | 968 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8JY5 | 36720 | 2024-07-20 | 2023-07-03 | 4.17 | 7.05 | 4.27 | 6.5 | 0.003 | 0.66 | 0.0 | 0.04 | 13.66 | 0.00 | 2.119 | 12.08 | 0.00 | 2.4 | 97.5 | 0.1 | 0.01 | 0.63 | 0.77 | — | 6.5 | 0.003 | 0.67 | 0.0 | 0.04 | 13.61 | 0.00 | 2.109 | 17.99 | 0.00 | 3.0 | 97.0 | 0.1 | 0.62 | 3.28 | 0.63 | 0.81 | — | 11511 | 1457 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JYK | 36724 | 2024-07-24 | 2023-07-03 | 2.59 | 3.04 | 2.60 | 2.8 | 0.003 | 0.55 | 0.0 | 0.05 | 13.58 | 0.00 | 2.202 | 3.95 | 0.00 | 3.5 | 96.5 | 0.0 | 0.20 | 0.85 | 0.86 | 3.49 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 14.06 | 0.00 | 2.167 | 4.25 | 0.83 | 3.9 | 96.1 | 0.0 | 0.47 | 0.29 | 0.84 | 0.86 | 3.46 | 25638 | 3183 | 15 | 0 | 54 | 0 | 0 | logfile |
✔ | 8TDL | 41166 | 2024-07-26 | 2023-07-03 | 3.6 | 4.14 | 3.01 | 3.4 | 0.003 | 0.49 | 0.0 | 0.04 | 11.61 | 0.00 | 2.368 | 4.65 | 0.00 | 1.1 | 98.9 | 0.0 | 3.94 | 0.73 | 0.79 | 2.99 | 3.4 | 0.003 | 0.49 | 0.0 | 0.04 | 12.67 | 0.00 | 2.113 | 5.56 | 1.25 | 1.8 | 98.2 | 0.0 | 4.41 | 0.46 | 0.72 | 0.80 | 3.26 | 32732 | 2548 | 7 | 0 | 0 | 0 | 15197 | logfile |
✔ | 8JYS | 36730 | 2024-07-18 | 2023-07-03 | 4.5 | 4.28 | 3.75 | 4.3 | 0.004 | 0.96 | 0.0 | 0.05 | 17.51 | 0.01 | 2.197 | 20.35 | 1.88 | 12.7 | 86.1 | 1.2 | -3.49 | 0.67 | 0.71 | — | 4.4 | 0.004 | 0.78 | 0.0 | 0.05 | 13.19 | 0.01 | 2.219 | 18.88 | 0.00 | 13.6 | 85.2 | 1.2 | -3.10 | 1.18 | 0.67 | 0.73 | — | 3522 | 441 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JY7 | 36722 | 2024-07-19 | 2023-07-03 | 3.2 | 2.66 | 3.25 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 12.18 | 0.00 | 2.340 | 8.29 | 0.00 | 3.6 | 96.4 | 0.0 | 1.38 | 0.60 | 0.76 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7292 | 968 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JY4 | 36719 | 2024-07-23 | 2023-07-02 | 3.58 | 4.95 | 3.68 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.96 | 0.00 | 1.980 | 6.92 | 0.00 | 3.0 | 96.9 | 0.1 | -0.52 | 0.62 | 0.78 | 0.68 | 4.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.09 | 0.00 | 2.086 | 13.89 | 2.28 | 3.6 | 96.3 | 0.1 | 1.01 | 1.35 | 0.62 | 0.80 | 0.40 | 22246 | 1383 | 1 | 0 | 0 | 0 | 11252 | logfile |
✘ | 8PNV | 17786 | 2024-07-21 | 2023-07-02 | 2.048 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13098 | 1626 | 30 | 0 | 6 | 522 | 0 | logfile |
✘ | 8PNU | 17785 | 2024-07-21 | 2023-07-02 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12888 | 1626 | 30 | 0 | 12 | 264 | 0 | logfile |
✔ | 8TCo | 41156 | 2024-07-21 | 2023-07-02 | 2.8 | 2.31 | — | 2.1 | 0.003 | 0.64 | 0.0 | 0.05 | 14.09 | 0.01 | 2.138 | 8.05 | 0.00 | 3.5 | 96.5 | 0.0 | -0.22 | 0.76 | 0.75 | 3.03 | 2.1 | 0.004 | 0.67 | 0.0 | 0.05 | 15.61 | 0.00 | 2.115 | 11.68 | 2.21 | 4.2 | 95.8 | 0.0 | -0.11 | 1.02 | 0.77 | 0.77 | 2.75 | 13222 | 1633 | 12 | 0 | 15 | 0 | 0 | logfile |