Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7XR6	33408	2022-07-03	2022-05-09	3.4	3.63	3.56	3.6	0.005	0.90	0.0	0.05	14.32	0.00	1.183	10.73	0.00	2.5	97.5	0.0	0.44	0.66	0.83	1.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10199	1272	6	0	39	0	0	logfile
✘	7ZR8	14886	2022-07-03	2022-05-03	3.7	3.81	3.43	3.8	0.003	0.46	0.0	0.04	8.45	0.00	2.181	7.02	0.74	3.9	96.1	0.0	-0.94	0.72	0.82	2.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3693	471	4	0	1	0	0	logfile
✘	7XoB	33343	2022-07-06	2022-05-01	3.3	2.37	3.36	2.1	0.005	0.91	12.0	0.08	13.68	0.01	1.329	8.16	0.57	4.9	95.0	0.2	-3.07	0.57	0.43	1.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	34108	4260	10	0	39	0	0	logfile
✘	7XoY	33363	2022-07-03	2022-05-01	4.25	4.23	4.31	4.3	0.006	0.73	0.0	0.05	12.27	0.00	1.257	45.15	8.23	10.2	88.7	1.2	-2.66	0.80	0.81	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13264	1832	8	0	4	0	0	logfile
✘	7Xo7	33339	2022-07-06	2022-05-01	3.38	2.45	3.48	2.1	0.002	0.42	0.0	0.04	7.66	0.00	2.025	7.28	0.08	2.0	98.0	0.0	-3.21	0.62	0.55	1.27	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	34209	4267	10	0	43	0	0	logfile
✘	7XJi	33228	2022-07-03	2022-04-18	3.9	3.60	3.70	3.9	0.003	0.60	0.0	0.04	13.72	0.00	1.224	9.09	0.00	4.3	95.7	0.0	-0.25	0.61	0.78	2.35	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7851	1027	6	0	1	0	0	logfile
✘	7UNR	26630	2022-07-09	2022-04-11	2.9	3.18	2.93	3.1	0.004	0.63	2.0	0.04	14.84	0.00	1.244	6.61	0.26	7.2	92.4	0.4	-1.63	0.79	0.88	3.11	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	149327	6502	82	4606	632	200	0	logfile
✘	7UNV	26634	2022-07-09	2022-04-11	2.7	3.21	2.67	3.0	0.004	0.61	0.0	0.04	14.91	0.00	1.243	7.01	0.16	6.6	93.0	0.4	-1.44	0.90	0.89	3.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	149599	6534	85	4605	598	295	0	logfile
✘	7UNU	26633	2022-07-09	2022-04-11	2.9	3.16	2.89	3.1	0.006	0.69	0.0	0.04	14.83	0.01	1.240	6.22	0.20	8.0	91.6	0.4	-1.70	0.81	0.89	3.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	149259	6488	86	4606	609	201	0	logfile
✘	7UNW	26635	2022-07-09	2022-04-11	2.6	3.21	2.65	3.0	0.005	0.67	0.0	0.04	14.88	0.01	1.239	6.37	0.02	6.8	92.8	0.3	-1.25	0.90	0.88	3.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	149945	6534	85	4605	799	352	0	logfile
✘	7UHF	26513	2022-07-04	2022-03-26	3.1	3.21	—	3.2	0.003	0.69	0.0	0.05	15.65	0.00	1.288	10.13	2.31	5.5	94.4	0.1	-1.07	0.55	0.79	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20379	2502	10	0	21	0	0	logfile
✘	7XCT	33127	2022-07-05	2022-03-25	2.72	3.02	—	3.0	0.012	1.10	0.0	0.06	22.70	0.01	2.220	3.90	0.59	5.3	94.3	0.4	-5.11	0.73	0.82	3.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18633	1575	16	290	2	0	0	logfile
✘	7UGG	26488	2022-07-05	2022-03-24	3.16	3.39	3.21	3.3	0.011	1.44	0.0	0.05	18.54	0.01	1.174	3.34	0.54	7.2	92.5	0.3	-6.21	0.72	0.82	3.49	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21670	2480	12	0	30	124	0	logfile
✘	7UG7	26486	2022-07-11	2022-03-24	2.58	3.04	2.86	2.8	0.008	1.09	10.0	0.09	14.95	0.01	1.241	3.75	2.15	3.2	96.7	0.1	0.05	0.84	0.88	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	154353	6785	70	4701	420	0	0	logfile
✘	7X9C	33071	2022-07-03	2022-03-15	3.0	3.24	—	3.2	0.002	0.50	0.0	0.04	10.16	0.00	1.182	8.90	0.00	3.2	96.8	0.0	-2.49	0.58	0.71	1.58	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7219	945	5	0	0	0	0	logfile
✘	7X9B	33070	2022-07-03	2022-03-15	3.4	3.88	—	3.9	0.002	0.51	0.0	0.04	12.11	0.00	1.231	8.93	0.13	4.0	96.0	0.0	-3.52	0.64	0.75	1.20	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7242	946	5	0	0	0	0	logfile
✘	7X9A	33069	2022-07-03	2022-03-15	3.2	3.87	—	3.6	0.002	0.49	0.0	0.04	10.37	0.00	1.229	7.31	0.00	3.0	97.0	0.0	-2.79	0.67	0.69	1.31	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7156	950	5	0	0	0	0	logfile
✘	7X2U	32971	2022-07-03	2022-02-26	3.2	2.92	—	3.1	0.010	0.85	0.0	0.05	15.98	0.00	1.178	11.60	0.94	3.6	96.4	0.0	-0.82	0.68	0.85	3.46	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11861	1451	6	0	12	0	0	logfile
✘	7X2D	32965	2022-07-03	2022-02-25	3.3	3.43	—	3.5	0.004	0.82	1.0	0.05	14.41	0.01	1.165	12.28	0.57	3.0	97.0	0.0	-0.46	0.64	0.79	2.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8203	1032	6	0	2	0	0	logfile
✘	7Z15	14441	2022-07-07	2022-02-24	1.93	2.40	1.98	2.3	0.011	0.95	9.0	0.06	14.81	0.01	1.215	4.09	0.83	1.6	98.4	0.0	1.32	0.83	0.86	6.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	46112	2888	32	0	16	1171	22357	logfile

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