Table showing results for August 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7TR6	26081	2024-08-09	2022-01-28	3.4	3.88	—	3.8	0.003	0.57	0.0	0.04	15.20	0.00	2.136	13.55	0.00	6.6	93.4	0.0	-0.80	0.71	0.65	0.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	27449	3383	15	45	0	0	0	logfile
✘	7QXi	14200	2024-08-10	2022-01-26	3.4	3.81	—	3.7	0.006	0.96	10.0	0.06	15.02	0.00	2.078	17.65	11.21	7.4	91.9	0.8	-3.87	0.82	0.77	1.09	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28928	3683	8	72	0	0	0	logfile
✘	7WP9	32679	2024-08-09	2022-01-23	2.56	2.20	—	1.9	0.004	0.78	1.0	0.05	14.32	0.01	2.294	4.05	0.40	4.9	95.0	0.1	-4.01	0.71	0.72	2.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25077	3141	13	0	28	0	0	logfile
✘	7TM0	25992	2024-08-10	2022-01-19	3.1	3.24	3.21	3.2	0.010	1.37	0.0	0.08	8.59	0.01	2.264	1.47	0.17	2.4	97.6	0.0	0.62	0.73	0.76	3.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	27963	4401	19	0	52	0	0	logfile
✘	7TL9	25984	2024-08-09	2022-01-18	3.5	3.83	3.52	3.5	0.004	0.74	0.0	0.06	14.38	0.01	2.260	3.60	0.00	3.9	96.1	0.0	-0.78	0.85	0.83	2.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25016	3083	24	0	60	0	0	logfile
✘	7WK5	32559	2024-08-10	2022-01-08	3.66	3.93	—	3.7	0.005	0.84	1.0	0.05	13.40	0.01	1.646	3.40	0.27	3.9	96.0	0.1	-4.59	0.66	0.58	0.35	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	29601	3750	4	0	0	0	0	logfile
✘	7TGE	25880	2024-08-08	2022-01-07	3.68	4.05	3.74	3.7	0.004	0.76	0.0	0.06	13.34	0.01	2.270	3.50	0.09	3.8	96.2	0.0	-1.30	0.80	0.72	0.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21461	2677	15	0	40	0	0	logfile
✘	7TGG	25881	2024-08-06	2022-01-07	4.1	4.67	—	4.4	0.004	0.71	0.0	0.05	11.74	0.01	2.070	15.91	0.00	7.4	92.6	0.0	-2.21	0.66	0.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18255	2445	30	0	0	0	0	logfile
✘	7WiW	32538	2024-08-03	2022-01-05	3.12	3.47	—	3.4	0.006	0.99	1.0	0.05	14.75	0.01	1.891	8.72	1.03	7.1	92.3	0.6	-4.54	0.72	0.89	3.28	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8603	1137	4	0	5	0	0	logfile
✘	7TES	25851	2024-08-11	2022-01-05	4.7	8.44	4.80	4.3	0.004	0.92	0.0	0.05	14.89	0.01	2.261	9.08	1.27	8.9	90.9	0.3	-4.01	0.82	0.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	31306	3986	8	0	0	0	0	logfile
✘	7TEi	25846	2024-08-09	2022-01-05	3.4	3.66	3.40	3.5	0.006	0.79	0.0	0.06	17.70	0.01	2.268	2.65	0.00	3.5	96.5	0.0	-0.99	0.84	0.84	2.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25420	3044	39	0	116	0	0	logfile
✘	7WHM	32504	2024-08-04	2021-12-31	2.7	2.86	—	2.8	0.006	0.64	0.0	0.05	13.85	0.00	2.155	6.30	0.00	3.1	96.9	0.0	0.15	0.43	0.87	4.68	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9650	1214	1	0	0	0	0	logfile
✘	7TDF	25827	2024-08-09	2021-12-31	2.7	2.10	2.66	1.9	0.006	0.74	0.0	0.05	12.56	0.01	2.148	2.71	0.19	3.5	96.5	0.0	0.06	0.74	0.77	4.39	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19566	1188	2	0	0	0	9792	logfile
✘	7WG8	32480	2024-08-09	2021-12-28	3.9	4.23	—	4.0	0.003	0.59	0.0	0.04	13.84	0.00	2.155	7.08	0.00	5.0	95.0	0.0	-1.10	0.85	0.83	1.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25629	3189	12	0	51	0	0	logfile
✘	7Qo1	14080	2024-08-05	2021-12-23	4.4	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14179	1694	9	62	1	0	0	logfile
✘	7TC0	25803	2024-08-05	2021-12-22	3.1	3.02	2.78	3.2	0.003	0.59	3.0	0.04	15.73	0.01	1.817	8.24	2.49	4.1	95.9	0.0	-1.78	0.74	0.81	1.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13809	1781	4	0	11	0	0	logfile
✘	7TAP	25780	2024-08-08	2021-12-21	2.8	3.00	—	3.0	0.013	1.47	4.0	0.07	15.28	0.01	2.225	8.19	1.37	1.3	98.6	0.1	0.26	0.64	0.81	3.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22520	2915	22	0	8	0	0	logfile
✘	7QL3	14062	2024-08-02	2021-12-19	3.32	3.47	3.01	3.5	0.011	2.01	8.0	0.11	12.27	0.01	2.489	0.00	0.00	7.7	92.3	0.0	-3.47	0.46	0.82	4.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3246	426	6	0	0	0	0	logfile
✘	7QKS	14050	2024-08-04	2021-12-18	3.1	3.39	3.08	3.3	0.005	0.74	0.0	0.05	14.59	0.01	2.210	4.65	0.10	1.8	98.2	0.0	0.65	0.75	0.87	2.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9339	1199	2	0	1	0	0	logfile
✘	7QKR	14049	2024-08-04	2021-12-18	3.2	3.37	3.13	3.3	0.007	0.86	0.0	0.06	15.13	0.01	2.084	6.53	0.40	1.8	98.2	0.0	0.20	0.73	0.88	2.71	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9403	1199	2	0	4	0	0	logfile

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