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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8V0U | 42870 | 2024-07-24 | 2023-11-17 | 3.3 | 3.50 | 3.28 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 14.48 | 0.01 | 2.280 | 3.18 | 0.00 | 4.7 | 95.2 | 0.0 | -1.64 | 0.69 | 0.79 | 2.64 | 3.5 | 0.004 | 0.55 | 0.0 | 0.04 | 15.38 | 0.00 | 2.152 | 5.85 | 1.33 | 4.0 | 96.0 | 0.0 | -0.35 | 0.33 | 0.74 | 0.84 | 2.78 | 24811 | 3105 | 12 | 0 | 39 | 0 | 0 | logfile |
✔ | 8V0V | 42871 | 2024-07-24 | 2023-11-17 | 3.1 | 3.36 | 3.20 | 3.4 | 0.005 | 0.81 | 0.0 | 0.06 | 14.52 | 0.01 | 2.286 | 3.19 | 0.00 | 5.1 | 94.8 | 0.1 | -1.56 | 0.63 | 0.79 | 2.60 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 15.32 | 0.00 | 2.179 | 5.13 | 1.98 | 4.6 | 95.3 | 0.1 | -0.18 | 0.32 | 0.61 | 0.78 | 2.49 | 25051 | 3132 | 12 | 0 | 41 | 0 | 0 | logfile |
✔ | 8V0P | 42864 | 2024-07-24 | 2023-11-17 | 3.3 | 3.60 | 3.41 | 3.6 | 0.005 | 0.79 | 0.0 | 0.06 | 14.49 | 0.01 | 2.294 | 3.21 | 0.00 | 5.0 | 95.0 | 0.0 | -1.57 | 0.70 | 0.78 | 2.54 | 3.6 | 0.002 | 0.52 | 0.0 | 0.04 | 15.16 | 0.00 | 2.165 | 6.21 | 1.67 | 4.3 | 95.7 | 0.0 | -0.12 | 0.37 | 0.73 | 0.83 | 2.11 | 24925 | 3111 | 15 | 0 | 47 | 0 | 0 | logfile |
✔ | 8V0T | 42869 | 2024-07-24 | 2023-11-17 | 3.1 | 3.35 | 3.20 | 3.4 | 0.006 | 0.82 | 1.0 | 0.06 | 14.43 | 0.01 | 2.310 | 3.20 | 0.04 | 5.8 | 94.1 | 0.0 | -1.84 | 0.68 | 0.80 | 2.32 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 15.29 | 0.00 | 2.198 | 6.47 | 1.29 | 4.4 | 95.5 | 0.0 | -0.33 | 1.15 | 0.68 | 0.81 | 2.17 | 24777 | 3123 | 6 | 0 | 27 | 0 | 0 | logfile |
✔ | 8V0L | 42860 | 2024-07-24 | 2023-11-17 | 3.0 | 3.23 | 3.06 | 3.2 | 0.004 | 0.77 | 0.0 | 0.05 | 14.19 | 0.01 | 2.299 | 2.62 | 0.00 | 4.9 | 95.1 | 0.0 | -1.01 | 0.67 | 0.81 | 2.68 | 3.3 | 0.002 | 0.52 | 0.0 | 0.04 | 15.22 | 0.00 | 2.177 | 5.53 | 1.44 | 4.6 | 95.4 | 0.0 | 0.21 | 0.34 | 0.67 | 0.83 | 2.69 | 24849 | 3105 | 15 | 0 | 45 | 0 | 0 | logfile |
✔ | 8V0R | 42867 | 2024-07-24 | 2023-11-17 | 3.0 | 3.22 | 3.18 | 3.3 | 0.004 | 0.74 | 0.0 | 0.05 | 13.57 | 0.01 | 2.244 | 2.74 | 0.00 | 4.3 | 95.7 | 0.1 | -1.40 | 0.72 | 0.83 | 3.15 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 15.12 | 0.00 | 2.170 | 5.61 | 1.36 | 3.6 | 96.4 | 0.1 | 0.18 | 1.15 | 0.71 | 0.84 | 2.90 | 24903 | 3123 | 9 | 0 | 36 | 0 | 0 | logfile |
✔ | 8V0M | 42861 | 2024-07-24 | 2023-11-17 | 3.2 | 3.44 | 3.28 | 3.5 | 0.007 | 0.93 | 0.0 | 0.05 | 14.11 | 0.01 | 1.974 | 3.26 | 0.00 | 5.3 | 94.7 | 0.0 | -1.63 | 0.66 | 0.78 | 2.37 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 14.84 | 0.00 | 2.126 | 5.88 | 1.11 | 4.2 | 95.8 | 0.0 | -0.51 | 0.36 | 0.65 | 0.79 | 2.26 | 24835 | 3105 | 15 | 0 | 44 | 0 | 0 | logfile |
✔ | 8V0X | 42873 | 2024-07-24 | 2023-11-17 | 3.3 | 3.51 | 3.34 | 3.5 | 0.004 | 0.79 | 0.0 | 0.05 | 14.55 | 0.01 | 2.304 | 3.00 | 0.00 | 5.8 | 94.2 | 0.0 | -1.76 | 0.67 | 0.77 | 2.58 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 15.26 | 0.00 | 2.141 | 6.44 | 1.62 | 4.1 | 95.9 | 0.0 | -0.17 | 0.37 | 0.69 | 0.81 | 2.35 | 24796 | 3123 | 6 | 0 | 29 | 0 | 0 | logfile |
✔ | 8V0Q | 42866 | 2024-07-24 | 2023-11-17 | 3.9 | 4.16 | 3.93 | 4.1 | 0.004 | 0.82 | 0.0 | 0.06 | 14.49 | 0.01 | 2.279 | 3.47 | 0.00 | 4.7 | 95.3 | 0.0 | -1.79 | 0.78 | 0.79 | 1.36 | 4.1 | 0.005 | 0.68 | 0.0 | 0.05 | 15.47 | 0.00 | 2.101 | 10.26 | 2.30 | 6.0 | 94.0 | 0.0 | -0.63 | 0.46 | 0.79 | 0.81 | 1.20 | 24795 | 3105 | 12 | 0 | 42 | 0 | 0 | logfile |
✔ | 8UZW | 42845 | 2024-07-25 | 2023-11-16 | 2.69 | 3.11 | 2.90 | 3.1 | 0.012 | 0.86 | 0.0 | 0.04 | 15.67 | 0.01 | 2.141 | 9.07 | 0.71 | 2.8 | 97.2 | 0.0 | 0.78 | 0.65 | 0.81 | 2.60 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 16.33 | 0.00 | 2.179 | 10.01 | 1.61 | 2.6 | 97.4 | 0.0 | 0.96 | 0.26 | 0.61 | 0.79 | 2.55 | 28258 | 3713 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8X53 | 38060 | 2024-07-20 | 2023-11-16 | 3.0 | 3.15 | 2.99 | 3.2 | 0.010 | 1.21 | 12.0 | 0.08 | 14.53 | 0.01 | 1.597 | 5.63 | 0.53 | 4.8 | 95.1 | 0.1 | -3.49 | 0.35 | 0.54 | 2.55 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 14.23 | 0.00 | 2.107 | 7.09 | 2.19 | 3.0 | 97.0 | 0.1 | 0.86 | 0.59 | 0.60 | 0.80 | 2.31 | 10947 | 1334 | 14 | 0 | 26 | 0 | 0 | logfile |
✔ | 8X54 | 38061 | 2024-07-20 | 2023-11-16 | 2.9 | 3.26 | 3.00 | 3.2 | 0.010 | 1.15 | 6.0 | 0.07 | 14.62 | 0.01 | 1.597 | 6.23 | 1.05 | 4.6 | 95.4 | 0.0 | -3.47 | 0.40 | 0.59 | 2.75 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 14.51 | 0.00 | 2.099 | 6.18 | 2.71 | 3.2 | 96.8 | 0.1 | 0.71 | 1.28 | 0.61 | 0.82 | 2.72 | 11009 | 1337 | 14 | 0 | 27 | 0 | 0 | logfile |
✔ | 8X52 | 38059 | 2024-07-20 | 2023-11-16 | 2.9 | 3.11 | 2.86 | 3.3 | 0.009 | 1.13 | 7.0 | 0.07 | 14.34 | 0.01 | 1.598 | 7.57 | 0.88 | 4.7 | 95.2 | 0.2 | -3.49 | 0.49 | 0.63 | 2.82 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 14.88 | 0.00 | 2.068 | 8.76 | 2.28 | 3.1 | 96.8 | 0.1 | 0.57 | 0.80 | 0.66 | 0.83 | 2.74 | 10907 | 1334 | 14 | 0 | 25 | 0 | 0 | logfile |
✔ | 8R54 | 18891 | 2024-07-21 | 2023-11-15 | 3.5 | 3.54 | 3.52 | 3.5 | 0.006 | 0.65 | 1.0 | 0.05 | 18.75 | 0.00 | 2.176 | 9.13 | 0.35 | 8.8 | 91.2 | 0.1 | -1.09 | 0.83 | 0.85 | 2.67 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 17.13 | 0.00 | 2.209 | 8.55 | 2.30 | 5.9 | 94.1 | 0.1 | -0.63 | 0.23 | 0.82 | 0.85 | 2.50 | 15900 | 1982 | 11 | 0 | 24 | 0 | 0 | logfile |
✔ | 8R51 | 18890 | 2024-07-21 | 2023-11-15 | 3.2 | 3.29 | 3.12 | 3.3 | 0.004 | 0.52 | 0.0 | 0.05 | 16.46 | 0.00 | 2.103 | 6.56 | 0.57 | 5.9 | 94.1 | 0.0 | -0.39 | 0.77 | 0.88 | 3.90 | 3.3 | 0.005 | 0.59 | 0.0 | 0.05 | 16.72 | 0.00 | 2.100 | 7.26 | 3.32 | 6.3 | 93.7 | 0.0 | -0.57 | 0.23 | 0.79 | 0.90 | 3.72 | 13978 | 1793 | 6 | 0 | 13 | 0 | 0 | logfile |
✔ | 8X43 | 38041 | 2024-07-25 | 2023-11-15 | 3.0 | 3.27 | 3.12 | 3.3 | 0.005 | 0.56 | 0.0 | 0.03 | 17.00 | 0.00 | 1.965 | 12.43 | 0.38 | 3.8 | 96.2 | 0.0 | 2.23 | 0.54 | 0.70 | 2.13 | 3.2 | 0.004 | 0.56 | 0.0 | 0.03 | 17.68 | 0.00 | 2.052 | 10.54 | 2.90 | 3.7 | 96.3 | 0.0 | 2.57 | 0.82 | 0.60 | 0.76 | 2.22 | 30164 | 1880 | 12 | 0 | 4 | 0 | 14984 | logfile |
✔ | 8R50 | 18889 | 2024-07-25 | 2023-11-15 | 3.1 | 3.35 | 3.19 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 17.30 | 0.00 | 2.186 | 9.71 | 0.16 | 8.0 | 92.0 | 0.1 | -1.17 | 0.82 | 0.83 | 2.96 | 3.3 | 0.005 | 0.64 | 0.0 | 0.05 | 16.91 | 0.00 | 2.093 | 11.32 | 4.27 | 8.5 | 91.4 | 0.1 | -1.29 | 0.92 | 0.83 | 0.86 | 3.25 | 29752 | 3778 | 12 | 0 | 32 | 0 | 0 | logfile |
✔ | 8UZB | 42838 | 2024-07-20 | 2023-11-14 | 2.63 | 2.93 | 2.72 | 2.9 | 0.003 | 0.53 | 0.0 | 0.04 | 20.26 | 0.00 | 2.147 | 5.73 | 0.00 | 3.7 | 96.3 | 0.0 | 0.49 | 0.67 | 0.78 | 2.83 | 2.9 | 0.003 | 0.51 | 0.0 | 0.04 | 21.21 | 0.00 | 2.206 | 6.18 | 2.22 | 3.0 | 97.0 | 0.0 | 0.99 | 0.34 | 0.70 | 0.82 | 2.51 | 10882 | 910 | 4 | 162 | 0 | 0 | 0 | logfile |
✔ | 8UZA | 42837 | 2024-07-20 | 2023-11-14 | 3.17 | 3.37 | 3.20 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 21.34 | 0.00 | 2.122 | 7.07 | 0.25 | 4.8 | 95.2 | 0.0 | -0.15 | 0.77 | 0.84 | 2.56 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 21.45 | 0.00 | 2.112 | 7.07 | 1.97 | 4.8 | 95.2 | 0.0 | 0.00 | 0.21 | 0.77 | 0.84 | 2.25 | 11072 | 910 | 4 | 171 | 0 | 0 | 0 | logfile |
✔ | 8UYi | 42807 | 2024-07-19 | 2023-11-13 | 3.13 | 3.34 | 3.23 | 3.4 | 0.004 | 0.67 | 0.0 | 0.04 | 12.68 | 0.00 | 2.057 | 4.03 | 1.08 | 2.1 | 97.9 | 0.0 | -0.84 | 0.52 | 0.74 | 3.12 | 3.4 | 0.002 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 1.977 | 9.23 | 2.92 | 2.3 | 97.7 | 0.0 | 1.79 | 2.35 | 0.66 | 0.82 | 2.45 | 5980 | 738 | 4 | 0 | 6 | 0 | 0 | logfile |