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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UQ6 | 42462 | 2024-07-20 | 2023-10-23 | 3.6 | 5.71 | 2.81 | 39.0 | 0.016 | 2.36 | 10.0 | 0.13 | 16.35 | 0.02 | 2.502 | 1.87 | 5.96 | 23.5 | 71.6 | 4.9 | -4.36 | 0.19 | 0.00 | 0.38 | 20.0 | 0.003 | 0.83 | 0.0 | 0.05 | 16.42 | 0.01 | 1.910 | 10.57 | 1.94 | 19.2 | 80.4 | 0.4 | -3.72 | 2.32 | 0.22 | 0.15 | 0.07 | 11700 | 765 | 1 | 0 | 0 | 0 | 5689 | logfile |
✔ | 8UPF | 42446 | 2024-07-22 | 2023-10-22 | 3.2 | 3.76 | 3.25 | 3.6 | 0.007 | 0.65 | 0.0 | 0.04 | 26.92 | 0.00 | 1.329 | 10.34 | 0.47 | 4.3 | 95.7 | 0.0 | -2.24 | 0.79 | 0.83 | 2.25 | 3.6 | 0.003 | 0.58 | 0.0 | 0.03 | 26.72 | 0.00 | 2.147 | 9.33 | 1.16 | 3.0 | 97.0 | 0.0 | 1.82 | 0.45 | 0.77 | 0.82 | 1.38 | 14012 | 1006 | 13 | 293 | 2 | 0 | 0 | logfile |
✔ | 8WUU | 37860 | 2024-07-21 | 2023-10-21 | 3.2 | 4.23 | 3.27 | 3.3 | 0.006 | 0.58 | 0.0 | 0.04 | 20.53 | 0.00 | 2.145 | 6.59 | 0.00 | 2.5 | 97.5 | 0.0 | 1.21 | 0.81 | 0.61 | 2.37 | 3.3 | 0.003 | 0.48 | 0.0 | 0.03 | 20.19 | 0.00 | 2.202 | 9.17 | 1.27 | 1.8 | 98.2 | 0.0 | 1.39 | 0.66 | 0.91 | 0.88 | 2.04 | 14563 | 1313 | 5 | 181 | 0 | 0 | 0 | logfile |
✔ | 8UoY | 42441 | 2024-07-21 | 2023-10-20 | 3.4 | 3.52 | 3.51 | 3.4 | 0.016 | 2.25 | 10.0 | 0.11 | 17.12 | 0.02 | 2.532 | 0.83 | 6.89 | 12.1 | 85.3 | 2.6 | -3.89 | 0.21 | 0.24 | 0.07 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 17.69 | 0.00 | 1.889 | 17.22 | 4.99 | 9.2 | 90.7 | 0.1 | -3.33 | 0.86 | 0.22 | 0.25 | 0.30 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8UoP | 42435 | 2024-07-21 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 17.20 | 0.00 | 1.949 | 14.94 | 4.40 | 11.8 | 87.9 | 0.3 | -3.15 | 0.92 | 0.24 | 0.24 | 0.27 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8WUA | 37852 | 2024-07-19 | 2023-10-20 | 3.6 | 4.37 | 3.76 | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 15.35 | 0.01 | 2.105 | 8.78 | 0.49 | 5.8 | 94.2 | 0.0 | 0.31 | 0.49 | 0.58 | 0.41 | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 16.76 | 0.00 | 2.274 | 9.96 | 3.45 | 6.1 | 93.9 | 0.0 | 0.55 | 0.91 | 0.54 | 0.68 | 1.16 | 5494 | 675 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WUi | 37855 | 2024-07-21 | 2023-10-20 | 3.4 | 3.66 | 3.48 | 3.7 | 0.006 | 0.84 | 0.0 | 0.05 | 19.52 | 0.01 | 1.049 | 21.56 | 5.09 | 6.2 | 93.0 | 0.7 | -1.15 | 0.56 | 0.68 | 1.43 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 18.19 | 0.00 | 2.136 | 14.47 | 3.37 | 5.4 | 94.1 | 0.5 | 0.21 | 0.72 | 0.57 | 0.76 | 1.36 | 15340 | 1826 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 8UNQ | 42413 | 2024-07-19 | 2023-10-19 | 3.3 | 3.68 | 3.44 | 3.7 | 0.004 | 0.77 | 0.0 | 0.05 | 13.49 | 0.00 | 2.218 | 3.68 | 0.33 | 1.4 | 98.6 | 0.0 | 1.09 | 0.61 | 0.83 | 2.97 | 3.7 | 0.002 | 0.49 | 0.0 | 0.04 | 14.66 | 0.00 | 2.251 | 3.68 | 1.15 | 2.0 | 98.0 | 0.0 | 1.39 | 0.92 | 0.65 | 0.87 | 2.82 | 6687 | 915 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8Uo1 | 42424 | 2024-07-19 | 2023-10-19 | 3.6 | 3.92 | 3.71 | 3.9 | 0.006 | 0.92 | 0.0 | 0.06 | 13.48 | 0.00 | 2.233 | 5.01 | 0.18 | 2.1 | 97.9 | 0.0 | 0.78 | 0.65 | 0.83 | 2.48 | 3.9 | 0.002 | 0.92 | 0.0 | 0.04 | 14.99 | 0.00 | 2.190 | 4.62 | 2.76 | 2.2 | 97.8 | 0.0 | 1.21 | 0.41 | 0.66 | 0.82 | 2.70 | 6915 | 1006 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8UNL | 42408 | 2024-07-19 | 2023-10-19 | 3.3 | 3.59 | 3.34 | 3.6 | 0.005 | 0.68 | 0.0 | 0.04 | 14.03 | 0.00 | 2.228 | 3.82 | 0.00 | 1.6 | 98.4 | 0.0 | 1.49 | 0.66 | 0.88 | 2.99 | 3.6 | 0.003 | 0.49 | 0.0 | 0.04 | 14.11 | 0.00 | 2.256 | 3.90 | 2.48 | 1.9 | 98.1 | 0.0 | 1.44 | 0.91 | 0.68 | 0.89 | 3.06 | 6550 | 894 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNY | 42421 | 2024-07-19 | 2023-10-19 | 3.6 | 4.06 | 3.81 | 4.0 | 0.006 | 0.97 | 0.0 | 0.06 | 14.64 | 0.01 | 2.255 | 7.64 | 0.00 | 1.7 | 98.3 | 0.0 | 1.32 | 0.63 | 0.80 | 2.56 | 4.0 | 0.002 | 0.52 | 0.0 | 0.04 | 14.50 | 0.00 | 2.260 | 4.42 | 2.79 | 1.3 | 98.7 | 0.0 | 1.65 | 0.97 | 0.65 | 0.81 | 2.47 | 6546 | 912 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNT | 42416 | 2024-07-19 | 2023-10-19 | 3.4 | 3.76 | 3.55 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 14.50 | 0.00 | 2.232 | 5.13 | 0.32 | 1.4 | 98.6 | 0.0 | 1.29 | 0.64 | 0.84 | 2.66 | 3.7 | 0.002 | 0.49 | 0.0 | 0.04 | 15.14 | 0.00 | 2.135 | 3.73 | 2.59 | 1.3 | 98.7 | 0.0 | 1.57 | 0.38 | 0.65 | 0.85 | 2.57 | 6712 | 913 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNo | 42411 | 2024-07-19 | 2023-10-19 | 3.3 | 3.74 | 3.50 | 3.7 | 0.005 | 0.67 | 0.0 | 0.04 | 13.45 | 0.00 | 2.236 | 5.25 | 0.17 | 2.1 | 97.9 | 0.0 | 1.15 | 0.59 | 0.82 | 3.67 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 14.62 | 0.00 | 2.248 | 4.04 | 2.25 | 2.1 | 97.9 | 0.0 | 1.17 | 0.94 | 0.64 | 0.86 | 3.48 | 6489 | 894 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNS | 42415 | 2024-07-19 | 2023-10-19 | 3.4 | 3.73 | 3.46 | 3.7 | 0.004 | 0.77 | 0.0 | 0.05 | 14.48 | 0.00 | 2.332 | 3.61 | 0.00 | 2.1 | 97.9 | 0.0 | 1.05 | 0.65 | 0.86 | 4.13 | 3.7 | 0.002 | 0.49 | 0.0 | 0.04 | 14.79 | 0.00 | 2.211 | 3.45 | 1.65 | 1.6 | 98.4 | 0.0 | 1.54 | 0.29 | 0.67 | 0.87 | 3.26 | 6683 | 916 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UoA | 42432 | 2024-07-18 | 2023-10-19 | 3.8 | 2.62 | 3.85 | 2.1 | 0.009 | 1.53 | 0.0 | 0.08 | 22.40 | 0.01 | 2.349 | 7.65 | 0.00 | 6.6 | 93.4 | 0.0 | -1.49 | 0.50 | 0.38 | 1.36 | 2.0 | 0.004 | 0.85 | 0.0 | 0.05 | 13.53 | 0.00 | 2.323 | 14.09 | 6.17 | 12.3 | 87.7 | 0.0 | -2.08 | 1.29 | 0.63 | 0.61 | 3.98 | 1440 | 215 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 8UNV | 42418 | 2024-07-19 | 2023-10-19 | 3.3 | 3.79 | 3.62 | 3.8 | 0.006 | 0.87 | 0.0 | 0.06 | 14.50 | 0.00 | 2.201 | 4.63 | 0.34 | 2.0 | 98.0 | 0.0 | 0.91 | 0.65 | 0.85 | 3.31 | 3.7 | 0.002 | 0.53 | 0.0 | 0.04 | 14.68 | 0.00 | 2.214 | 4.31 | 1.53 | 1.8 | 98.1 | 0.1 | 1.12 | 0.36 | 0.63 | 0.86 | 2.76 | 6591 | 911 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNX | 42420 | 2024-07-19 | 2023-10-19 | 3.6 | 3.87 | 3.64 | 3.9 | 0.006 | 0.96 | 0.0 | 0.06 | 13.81 | 0.01 | 2.177 | 5.50 | 0.00 | 2.3 | 97.7 | 0.0 | 1.34 | 0.63 | 0.82 | 2.78 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 14.79 | 0.00 | 2.268 | 4.48 | 1.34 | 1.6 | 98.4 | 0.0 | 1.68 | 0.43 | 0.65 | 0.83 | 2.10 | 6688 | 923 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8WU1 | 37849 | 2024-07-19 | 2023-10-19 | 3.2 | 3.40 | 3.17 | 3.4 | 0.008 | 0.62 | 0.0 | 0.04 | 11.92 | 0.00 | 2.208 | 7.36 | 0.00 | 4.5 | 95.5 | 0.0 | -0.58 | 0.66 | 0.79 | 3.60 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 13.85 | 0.00 | 2.318 | 7.50 | 1.59 | 2.8 | 97.2 | 0.0 | 0.32 | 0.36 | 0.65 | 0.79 | 3.18 | 7250 | 1014 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UNM | 42409 | 2024-07-19 | 2023-10-19 | 3.4 | 3.77 | 3.54 | 3.7 | 0.005 | 0.64 | 0.0 | 0.04 | 13.95 | 0.00 | 2.208 | 3.37 | 0.00 | 2.5 | 97.5 | 0.0 | 1.00 | 0.64 | 0.86 | 3.61 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 14.60 | 0.00 | 2.221 | 3.37 | 2.30 | 1.7 | 98.3 | 0.0 | 1.46 | 0.32 | 0.64 | 0.86 | 2.86 | 6415 | 889 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNJ | 42406 | 2024-07-20 | 2023-10-19 | 3.35 | 3.57 | 3.40 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 14.94 | 0.01 | 2.083 | 8.59 | 3.51 | 2.6 | 97.4 | 0.0 | -1.77 | 0.65 | 0.58 | 1.04 | 3.5 | 0.004 | 0.88 | 0.0 | 0.04 | 16.28 | 0.01 | 1.975 | 17.31 | 2.52 | 3.0 | 97.0 | 0.0 | 0.59 | 2.70 | 0.68 | 0.64 | 0.73 | 11916 | 1493 | 9 | 0 | 7 | 0 | 0 | logfile |