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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PSG | 17852 | 2024-07-25 | 2023-07-13 | 3.7 | 3.67 | 3.55 | 3.3 | 0.014 | 1.89 | 0.0 | 0.09 | 14.86 | 0.01 | 2.169 | 5.38 | 0.65 | 7.3 | 92.4 | 0.3 | -3.71 | 0.73 | 0.84 | 2.35 | 3.3 | 0.002 | 0.60 | 0.0 | 0.04 | 15.83 | 0.00 | 2.134 | 10.40 | 0.89 | 3.0 | 97.0 | 0.0 | 0.52 | 1.14 | 0.73 | 0.82 | 2.01 | 29610 | 3777 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PSL | 17855 | 2024-07-25 | 2023-07-13 | 3.7 | 3.61 | 3.56 | 3.5 | 0.014 | 1.89 | 0.0 | 0.09 | 14.72 | 0.01 | 2.124 | 4.80 | 0.22 | 7.3 | 92.2 | 0.5 | -3.55 | 0.71 | 0.85 | 2.18 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.89 | 0.00 | 2.083 | 10.26 | 1.33 | 2.9 | 97.1 | 0.0 | 0.59 | 1.14 | 0.71 | 0.83 | 1.96 | 29610 | 3777 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PT2 | 17866 | 2024-07-23 | 2023-07-13 | 2.59 | 2.37 | 2.57 | 2.6 | 0.002 | 0.45 | 0.0 | 0.04 | 17.64 | 0.00 | 1.885 | 2.40 | 1.37 | 3.6 | 96.4 | 0.0 | 1.25 | 0.74 | 0.88 | 4.57 | 2.6 | 0.002 | 0.47 | 0.0 | 0.04 | 17.63 | 0.00 | 1.914 | 2.31 | 1.63 | 3.6 | 96.4 | 0.0 | 1.30 | 0.26 | 0.74 | 0.89 | 4.58 | 22091 | 1355 | 8 | 27 | 3 | 1 | 10901 | logfile |
✔ | 8PSN | 17857 | 2024-07-23 | 2023-07-13 | 2.73 | 2.54 | 2.70 | 2.6 | 0.003 | 0.57 | 1.0 | 0.04 | 18.65 | 0.00 | 1.671 | 3.50 | 2.57 | 2.1 | 97.8 | 0.1 | 1.12 | 0.74 | 0.87 | 4.16 | 2.6 | 0.003 | 0.52 | 0.0 | 0.04 | 18.41 | 0.00 | 1.823 | 3.77 | 2.05 | 2.0 | 97.9 | 0.1 | 0.91 | 0.30 | 0.74 | 0.88 | 4.40 | 22266 | 1361 | 12 | 28 | 6 | 2 | 10965 | logfile |
✔ | 8PSS | 17861 | 2024-07-22 | 2023-07-13 | 2.83 | 2.94 | 2.75 | 2.9 | 0.002 | 0.44 | 0.0 | 0.03 | 18.02 | 0.00 | 1.778 | 3.66 | 1.29 | 2.4 | 97.5 | 0.1 | 1.49 | 0.79 | 0.90 | 3.63 | 2.8 | 0.003 | 0.46 | 0.0 | 0.04 | 17.69 | 0.00 | 1.841 | 3.83 | 2.15 | 2.4 | 97.6 | 0.0 | 1.46 | 0.30 | 0.78 | 0.90 | 3.72 | 17722 | 1071 | 7 | 29 | 2 | 0 | 8690 | logfile |
✔ | 8PT7 | 17869 | 2024-07-22 | 2023-07-13 | 2.8 | 2.94 | 2.75 | 2.9 | 0.002 | 0.44 | 0.0 | 0.03 | 18.02 | 0.00 | 1.778 | 3.66 | 1.29 | 2.4 | 97.5 | 0.1 | 1.49 | 0.79 | 0.90 | 3.63 | 2.8 | 0.003 | 0.46 | 0.0 | 0.04 | 17.68 | 0.00 | 1.837 | 3.71 | 1.94 | 2.4 | 97.6 | 0.0 | 1.48 | 0.30 | 0.78 | 0.90 | 3.75 | 17722 | 1071 | 7 | 29 | 2 | 0 | 8690 | logfile |
✔ | 8PT4 | 17867 | 2024-07-20 | 2023-07-13 | 3.33 | 4.03 | 3.35 | 3.8 | 0.002 | 0.53 | 0.0 | 0.04 | 11.88 | 0.00 | 2.215 | 11.04 | 4.94 | 3.1 | 96.3 | 0.6 | -0.51 | 0.75 | 0.66 | 1.18 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 13.89 | 0.00 | 2.208 | 12.55 | 2.14 | 5.0 | 95.0 | 0.0 | 0.32 | 1.84 | 0.83 | 0.78 | 2.03 | 11438 | 1437 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PSX | 17864 | 2024-07-23 | 2023-07-13 | 2.96 | 2.64 | 2.80 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 17.61 | 0.00 | 1.879 | 3.35 | 1.71 | 4.3 | 95.7 | 0.0 | 0.82 | 0.69 | 0.84 | 3.85 | 2.7 | 0.003 | 0.50 | 0.0 | 0.04 | 17.58 | 0.00 | 1.935 | 3.30 | 1.89 | 4.3 | 95.7 | 0.0 | 0.96 | 0.90 | 0.68 | 0.84 | 3.96 | 22403 | 1356 | 9 | 34 | 6 | 0 | 11003 | logfile |
✔ | 8PT6 | 17868 | 2024-07-23 | 2023-07-13 | 3.03 | 2.81 | 2.82 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 18.46 | 0.00 | 1.826 | 5.57 | 2.43 | 3.7 | 96.2 | 0.1 | 1.06 | 0.74 | 0.84 | 3.10 | 2.9 | 0.002 | 0.49 | 0.0 | 0.04 | 18.03 | 0.00 | 1.794 | 5.33 | 2.71 | 3.7 | 96.2 | 0.1 | 1.03 | 0.34 | 0.75 | 0.85 | 3.05 | 20436 | 1242 | 10 | 28 | 6 | 0 | 10051 | logfile |
✔ | 8PSZ | 17865 | 2024-07-23 | 2023-07-13 | 2.42 | 2.18 | 2.38 | 2.4 | 0.003 | 0.49 | 0.0 | 0.04 | 17.75 | 0.01 | 1.869 | 2.48 | 2.06 | 4.3 | 95.7 | 0.0 | 0.91 | 0.79 | 0.89 | 4.82 | 2.4 | 0.003 | 0.50 | 0.0 | 0.04 | 17.50 | 0.00 | 1.777 | 2.74 | 0.94 | 3.9 | 96.1 | 0.0 | 1.23 | 0.53 | 0.73 | 0.89 | 4.99 | 23098 | 1355 | 16 | 53 | 6 | 109 | 11195 | logfile |
✔ | 8TGi | 41237 | 2024-07-19 | 2023-07-12 | 3.4 | 2.43 | 3.43 | 2.2 | 0.004 | 0.76 | 0.0 | 0.05 | 18.04 | 0.01 | 2.208 | 22.01 | 0.81 | 1.1 | 98.9 | 0.0 | 0.60 | 0.74 | 0.75 | 1.85 | 2.2 | 0.004 | 0.72 | 0.0 | 0.05 | 16.70 | 0.00 | 2.189 | 9.94 | 3.57 | 1.7 | 98.3 | 0.0 | 1.90 | 0.76 | 0.75 | 0.76 | 1.70 | 5786 | 767 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGM | 41241 | 2024-07-19 | 2023-07-12 | 3.5 | 2.42 | 3.47 | 2.2 | 0.007 | 0.97 | 1.0 | 0.05 | 17.99 | 0.01 | 2.279 | 14.16 | 0.65 | 3.0 | 96.8 | 0.1 | 0.63 | 0.77 | 0.80 | 2.24 | 2.2 | 0.004 | 0.69 | 0.0 | 0.04 | 16.77 | 0.01 | 2.268 | 6.45 | 3.91 | 2.6 | 97.4 | 0.0 | 1.84 | 0.36 | 0.78 | 0.78 | 1.66 | 5826 | 768 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8PQV | 17825 | 2024-07-24 | 2023-07-12 | 4.0 | 3.78 | 3.91 | 3.6 | 0.005 | 0.88 | 0.0 | 0.05 | 18.62 | 0.01 | 2.216 | 5.82 | 0.53 | 3.0 | 96.9 | 0.1 | -1.33 | 0.83 | 0.80 | — | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 18.55 | 0.00 | 2.169 | 10.43 | 3.30 | 2.7 | 97.3 | 0.0 | 1.84 | 1.11 | 0.83 | 0.80 | — | 24122 | 2996 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PQW | 17826 | 2024-07-26 | 2023-07-12 | 4.2 | 4.43 | 4.16 | 3.5 | 0.004 | 0.86 | 0.0 | 0.05 | 14.74 | 0.01 | 1.844 | 6.08 | 0.03 | 3.5 | 96.5 | 0.0 | -1.66 | 0.84 | 0.76 | — | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 14.41 | 0.00 | 1.975 | 10.92 | 0.00 | 3.0 | 97.0 | 0.0 | 1.78 | 0.35 | 0.84 | 0.77 | — | 30491 | 4035 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PQY | 17828 | 2024-07-25 | 2023-07-12 | 3.8 | 3.66 | 3.89 | 2.8 | 0.004 | 0.89 | 0.0 | 0.05 | 17.21 | 0.01 | 1.902 | 5.70 | 0.36 | 3.8 | 96.2 | 0.0 | -1.91 | 0.84 | 0.74 | 1.03 | 2.8 | 0.003 | 0.62 | 0.0 | 0.04 | 17.59 | 0.00 | 1.956 | 13.93 | 3.25 | 3.7 | 96.3 | 0.0 | 0.57 | 0.41 | 0.84 | 0.76 | 0.95 | 27916 | 3518 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PR2 | 17832 | 2024-07-21 | 2023-07-12 | 3.8 | 3.87 | 3.70 | 3.9 | 0.005 | 1.03 | 0.0 | 0.05 | 18.62 | 0.01 | 1.770 | 5.14 | 0.74 | 2.5 | 97.4 | 0.1 | -0.80 | 0.74 | 0.81 | 1.58 | 3.9 | 0.004 | 0.94 | 0.0 | 0.04 | 18.87 | 0.00 | 2.172 | 11.58 | 3.14 | 2.0 | 97.9 | 0.1 | 2.65 | 0.41 | 0.75 | 0.83 | 1.51 | 14906 | 1816 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TGH | 41236 | 2024-07-19 | 2023-07-12 | 3.5 | 2.39 | 3.45 | 2.2 | 0.007 | 0.81 | 0.0 | 0.05 | 17.21 | 0.01 | 2.269 | 16.16 | 0.98 | 2.5 | 97.5 | 0.0 | 0.62 | 0.79 | 0.82 | 2.22 | 2.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.29 | 0.01 | 2.205 | 5.02 | 3.74 | 2.4 | 97.6 | 0.0 | 2.21 | 0.74 | 0.78 | 0.79 | 2.03 | 5778 | 767 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8PR4 | 17834 | 2024-07-20 | 2023-07-12 | 3.5 | 4.03 | 3.51 | 3.8 | 0.008 | 1.33 | 0.0 | 0.07 | 17.21 | 0.01 | 2.309 | 4.25 | 1.00 | 7.5 | 92.4 | 0.2 | -3.40 | 0.81 | 0.80 | 1.91 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.41 | 0.00 | 2.136 | 9.59 | 4.35 | 5.2 | 94.8 | 0.0 | 0.31 | 0.40 | 0.82 | 0.82 | 1.59 | 9494 | 1322 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8TGN | 41242 | 2024-07-19 | 2023-07-12 | 3.3 | 2.50 | 3.28 | 2.9 | 0.005 | 0.97 | 0.0 | 0.05 | 18.68 | 0.01 | 2.195 | 28.85 | 0.49 | 1.3 | 98.5 | 0.1 | 0.16 | 0.71 | 0.73 | 1.69 | 2.9 | 0.003 | 0.77 | 0.0 | 0.04 | 17.60 | 0.01 | 2.166 | 12.58 | 3.43 | 1.9 | 98.1 | 0.0 | 1.51 | 0.38 | 0.71 | 0.72 | 1.52 | 5745 | 761 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TGJ | 41238 | 2024-07-19 | 2023-07-12 | 3.5 | 2.56 | 3.51 | 2.9 | 0.004 | 0.78 | 0.0 | 0.05 | 18.01 | 0.01 | 2.292 | 25.32 | 0.66 | 1.6 | 98.4 | 0.0 | 0.58 | 0.71 | 0.72 | 1.85 | 2.9 | 0.003 | 0.71 | 0.0 | 0.04 | 17.04 | 0.01 | 2.106 | 9.70 | 4.92 | 2.0 | 98.0 | 0.0 | 1.54 | 0.38 | 0.72 | 0.72 | 1.30 | 5720 | 761 | 3 | 0 | 1 | 0 | 0 | logfile |