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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PDN | 17615 | 2024-07-26 | 2023-06-12 | 4.7 | 4.94 | 4.72 | 4.7 | 0.007 | 0.66 | 0.0 | 0.04 | 15.88 | 0.00 | 0.984 | 15.88 | 0.00 | 1.5 | 98.5 | 0.0 | 0.42 | 0.64 | 0.57 | — | 4.7 | 0.004 | 0.81 | 0.0 | 0.04 | 15.86 | 0.01 | 1.799 | 20.05 | 0.00 | 1.5 | 98.5 | 0.0 | 0.61 | 3.80 | 0.70 | 0.66 | — | 33228 | 4068 | 24 | 84 | 0 | 0 | 0 | logfile |
✔ | 8T53 | 41042 | 2024-07-19 | 2023-06-12 | 4.1 | 4.29 | 4.68 | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 12.60 | 0.00 | 2.201 | 11.96 | 0.00 | 1.8 | 98.2 | 0.0 | 0.81 | 0.45 | 0.45 | — | 4.1 | 0.002 | 0.60 | 0.0 | 0.04 | 13.37 | 0.00 | 2.225 | 11.66 | 0.00 | 2.3 | 97.7 | 0.0 | 1.65 | 0.60 | 0.46 | 0.47 | — | 6660 | 796 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD9 | 17607 | 2024-07-19 | 2023-06-12 | 3.6 | 2.49 | 3.49 | 2.3 | 0.005 | 0.73 | 0.0 | 0.04 | 13.44 | 0.01 | 2.197 | 5.39 | 0.11 | 2.1 | 97.9 | 0.0 | 2.01 | 0.64 | 0.68 | 1.57 | 2.2 | 0.003 | 0.61 | 0.0 | 0.04 | 16.43 | 0.00 | 2.080 | 7.14 | 2.95 | 1.3 | 98.7 | 0.0 | 2.15 | 1.90 | 0.73 | 0.75 | 1.61 | 8107 | 1024 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PDP | 17617 | 2024-07-25 | 2023-06-12 | 2.9 | 3.05 | 2.91 | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.90 | 0.00 | 0.568 | 13.90 | 0.00 | 1.4 | 98.6 | 0.0 | 0.66 | 0.73 | 0.81 | 2.73 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 16.41 | 0.00 | 2.162 | 10.79 | 1.96 | 1.4 | 98.6 | 0.0 | 1.89 | 0.48 | 0.72 | 0.83 | 2.70 | 30160 | 3700 | 30 | 70 | 0 | 0 | 0 | logfile |
✔ | 8JPN | 36484 | 2024-07-19 | 2023-06-12 | 2.9 | 3.03 | 2.75 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 15.56 | 0.00 | 2.268 | 3.27 | 0.36 | 3.3 | 96.7 | 0.0 | 1.11 | 0.60 | 0.72 | 1.27 | 3.0 | 0.002 | 0.55 | 0.0 | 0.04 | 16.14 | 0.00 | 2.127 | 3.51 | 1.78 | 2.7 | 97.3 | 0.0 | 1.52 | 1.17 | 0.73 | 0.89 | 3.04 | 8557 | 1157 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PDS | 17620 | 2024-07-19 | 2023-06-12 | 2.9 | 3.01 | 2.88 | 3.0 | 0.004 | 0.58 | 0.0 | 0.04 | 15.09 | 0.00 | 2.230 | 7.92 | 0.16 | 1.6 | 98.4 | 0.0 | -0.16 | 0.68 | 0.83 | 3.17 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 17.00 | 0.00 | 2.191 | 7.92 | 2.84 | 1.2 | 98.8 | 0.0 | 1.05 | 0.38 | 0.68 | 0.84 | 2.60 | 6056 | 744 | 5 | 14 | 0 | 0 | 0 | logfile |
✔ | 8PD2 | 17598 | 2024-07-19 | 2023-06-11 | 3.25 | 2.29 | 3.19 | 2.1 | 0.004 | 0.52 | 0.0 | 0.04 | 12.99 | 0.00 | 2.322 | 3.02 | 0.00 | 1.4 | 98.6 | 0.0 | 0.72 | 0.62 | 0.78 | 3.03 | 2.1 | 0.003 | 0.52 | 0.0 | 0.04 | 15.84 | 0.00 | 2.244 | 4.80 | 2.56 | 1.4 | 98.6 | 0.0 | 2.59 | 0.97 | 0.68 | 0.82 | 2.36 | 8270 | 1047 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD5 | 17601 | 2024-07-19 | 2023-06-11 | 3.4 | 2.30 | 3.32 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 13.12 | 0.00 | 2.148 | 2.18 | 0.00 | 2.2 | 97.8 | 0.0 | 1.83 | 0.61 | 0.77 | 2.43 | 2.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.95 | 0.00 | 2.268 | 4.48 | 2.28 | 1.7 | 98.3 | 0.0 | 2.65 | 0.49 | 0.68 | 0.81 | 2.00 | 8093 | 1024 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD3 | 17599 | 2024-07-19 | 2023-06-11 | 3.3 | 2.29 | 3.23 | 2.1 | 0.003 | 0.56 | 0.0 | 0.04 | 13.67 | 0.00 | 2.227 | 4.23 | 0.00 | 1.3 | 98.7 | 0.0 | 0.70 | 0.61 | 0.78 | 2.84 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 15.68 | 0.00 | 2.163 | 5.56 | 2.94 | 1.5 | 98.5 | 0.0 | 2.38 | 0.96 | 0.67 | 0.81 | 2.04 | 8121 | 1028 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD7 | 17602 | 2024-07-19 | 2023-06-11 | 3.4 | 2.32 | 3.31 | 2.1 | 0.003 | 0.59 | 0.0 | 0.04 | 12.69 | 0.00 | 2.276 | 3.44 | 0.11 | 1.5 | 98.5 | 0.0 | 1.39 | 0.62 | 0.78 | 2.65 | 2.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.85 | 0.00 | 2.218 | 5.92 | 2.72 | 2.5 | 97.5 | 0.0 | 2.32 | 0.99 | 0.69 | 0.81 | 2.03 | 8121 | 1028 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JPF | 36478 | 2024-07-18 | 2023-06-11 | 3.02 | 3.21 | 3.41 | 3.3 | 0.008 | 0.81 | 0.0 | 0.04 | 18.98 | 0.00 | 2.214 | 5.45 | 0.46 | 2.7 | 97.3 | 0.0 | 2.25 | 0.48 | 0.75 | 2.58 | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 17.72 | 0.00 | 2.069 | 7.49 | 2.75 | 3.4 | 96.6 | 0.0 | 1.99 | 0.93 | 0.45 | 0.78 | 2.68 | 2269 | 304 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JPD | 36476 | 2024-07-19 | 2023-06-11 | 2.81 | 3.01 | 2.83 | 3.1 | 0.004 | 0.61 | 0.0 | 0.04 | 14.35 | 0.00 | 2.283 | 4.50 | 0.37 | 2.7 | 97.3 | 0.0 | 0.83 | 0.68 | 0.79 | 3.29 | 3.0 | 0.004 | 0.65 | 0.0 | 0.04 | 17.30 | 0.00 | 2.162 | 8.31 | 2.06 | 2.6 | 97.4 | 0.0 | 0.98 | 1.35 | 0.69 | 0.86 | 3.18 | 5198 | 658 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8T4M | 41036 | 2024-07-22 | 2023-06-09 | 3.16 | 3.60 | 3.20 | 3.5 | 0.002 | 0.56 | 0.0 | 0.04 | 14.87 | 0.00 | 2.217 | 5.78 | 0.00 | 3.4 | 96.6 | 0.0 | 0.92 | 0.65 | 0.81 | 2.75 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.37 | 0.00 | 2.181 | 7.03 | 2.49 | 3.4 | 96.6 | 0.0 | 1.85 | 1.35 | 0.66 | 0.82 | 2.65 | 17000 | 2132 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8T4J | 41033 | 2024-07-19 | 2023-06-09 | 3.9 | 4.16 | 3.61 | 4.0 | 0.002 | 0.60 | 0.0 | 0.04 | 13.69 | 0.00 | 2.275 | 5.11 | 0.28 | 1.8 | 98.2 | 0.0 | 0.48 | 0.65 | 0.79 | 0.89 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 15.52 | 0.00 | 2.237 | 7.50 | 3.80 | 1.6 | 98.4 | 0.0 | 1.42 | 0.98 | 0.67 | 0.80 | 0.81 | 7824 | 1107 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8T4E | 41028 | 2024-07-19 | 2023-06-09 | 3.5 | 3.74 | 3.32 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 16.23 | 0.00 | 2.286 | 5.50 | 0.28 | 2.8 | 97.2 | 0.0 | 1.81 | 0.58 | 0.73 | 0.37 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 16.57 | 0.00 | 2.196 | 6.11 | 4.65 | 2.3 | 97.7 | 0.0 | 3.04 | 0.41 | 0.68 | 0.80 | 0.81 | 7714 | 1089 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PC5 | 17594 | 2024-07-20 | 2023-06-09 | 3.02 | 3.37 | 3.06 | 3.0 | 0.006 | 0.79 | 0.0 | 0.06 | 29.26 | 0.01 | 2.205 | 7.09 | 0.42 | 1.9 | 98.1 | 0.0 | 1.05 | 0.90 | 0.86 | 3.01 | 3.0 | 0.003 | 0.58 | 0.0 | 0.03 | 27.68 | 0.00 | 2.207 | 7.14 | 1.40 | 2.3 | 97.7 | 0.0 | 2.42 | 1.95 | 0.92 | 0.91 | 2.57 | 12836 | 853 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 8PC6 | 17595 | 2024-07-21 | 2023-06-09 | 3.04 | 3.48 | 3.06 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 28.54 | 0.01 | 2.142 | 7.87 | 0.13 | 2.2 | 97.8 | 0.0 | 0.83 | 0.89 | 0.83 | 2.36 | 3.1 | 0.003 | 0.57 | 0.0 | 0.03 | 27.24 | 0.00 | 2.184 | 10.03 | 0.63 | 3.0 | 97.0 | 0.0 | 2.20 | 1.33 | 0.93 | 0.91 | 2.68 | 13493 | 939 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 8T4H | 41031 | 2024-07-19 | 2023-06-09 | 3.8 | 3.97 | 3.47 | 3.9 | 0.004 | 0.76 | 0.0 | 0.04 | 15.55 | 0.00 | 2.267 | 5.59 | 0.57 | 2.2 | 97.8 | 0.0 | 1.54 | 0.62 | 0.75 | 0.99 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.43 | 0.00 | 2.241 | 8.62 | 4.96 | 2.4 | 97.6 | 0.0 | 2.46 | 0.96 | 0.67 | 0.80 | 0.92 | 7702 | 1088 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8T4G | 41030 | 2024-07-19 | 2023-06-09 | 3.5 | 3.76 | 3.37 | 3.7 | 0.003 | 0.53 | 0.0 | 0.04 | 15.82 | 0.00 | 2.254 | 5.37 | 0.14 | 2.2 | 97.8 | 0.0 | 2.80 | 0.68 | 0.82 | 1.39 | 3.7 | 0.003 | 0.51 | 0.0 | 0.04 | 16.56 | 0.00 | 2.199 | 4.50 | 2.26 | 1.9 | 98.1 | 0.0 | 3.01 | 0.21 | 0.68 | 0.82 | 1.64 | 7721 | 1089 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8T4L | 41035 | 2024-07-24 | 2023-06-09 | 3.2 | 3.56 | 3.37 | 3.6 | 0.006 | 1.05 | 0.0 | 0.06 | 11.47 | 0.01 | 2.269 | 2.44 | 0.34 | 2.0 | 98.0 | 0.0 | 1.06 | 0.69 | 0.81 | 2.88 | 3.5 | 0.006 | 0.84 | 1.0 | 0.05 | 13.91 | 0.00 | 1.997 | 10.82 | 3.44 | 3.6 | 96.4 | 0.0 | 0.41 | 0.72 | 0.70 | 0.83 | 2.83 | 24375 | 3039 | 33 | 0 | 57 | 0 | 0 | logfile |