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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WML | 37655 | 2024-10-12 | 2023-10-03 | 2.86 | 3.12 | 3.00 | 3.1 | 0.005 | 0.86 | 0.0 | 0.06 | 16.12 | 0.01 | 2.070 | 2.65 | 0.00 | 4.4 | 95.6 | 0.0 | -1.13 | 0.70 | 0.83 | 3.08 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 17.41 | 0.00 | 2.352 | 3.92 | 1.26 | 4.1 | 95.9 | 0.0 | -0.38 | 0.49 | 0.72 | 0.85 | 2.69 | 13283 | 1543 | 4 | 38 | 4 | 0 | 0 | logfile |
✔ | 8WMH | 37652 | 2024-10-12 | 2023-10-03 | 2.6 | 2.23 | 2.67 | 1.8 | 0.003 | 0.54 | 0.0 | 0.04 | 19.42 | 0.00 | 2.196 | 9.02 | 0.36 | 4.1 | 95.9 | 0.0 | -0.02 | 0.60 | 0.62 | 2.31 | 1.8 | 0.004 | 0.59 | 0.0 | 0.04 | 20.27 | 0.00 | 2.512 | 7.27 | 1.81 | 4.5 | 95.5 | 0.0 | -0.18 | 0.66 | 0.73 | 0.74 | 2.32 | 12942 | 1198 | 4 | 141 | 0 | 0 | 0 | logfile |
✔ | 8WM5 | 37641 | 2024-10-10 | 2023-10-03 | 3.04 | 3.42 | 3.11 | 3.4 | 0.007 | 0.77 | 0.0 | 0.04 | 18.60 | 0.01 | 1.284 | 12.25 | 0.00 | 4.3 | 95.6 | 0.1 | 1.57 | 0.66 | 0.85 | 2.35 | 3.4 | 0.004 | 0.58 | 0.0 | 0.04 | 16.86 | 0.00 | 2.376 | 9.34 | 2.54 | 2.2 | 97.8 | 0.0 | 2.45 | 0.92 | 0.58 | 0.86 | 2.17 | 7179 | 950 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 8WMA | 37647 | 2024-10-09 | 2023-10-03 | 3.47 | 2.40 | 3.36 | 2.3 | 0.007 | 0.80 | 0.0 | 0.05 | 11.97 | 0.00 | 1.739 | 5.91 | 0.31 | 4.4 | 95.6 | 0.0 | -0.62 | 0.68 | 0.73 | 3.00 | 2.0 | 0.004 | 0.63 | 0.0 | 0.04 | 14.99 | 0.00 | 2.535 | 7.03 | 2.48 | 3.7 | 96.3 | 0.0 | 0.70 | 0.43 | 0.70 | 0.74 | 2.30 | 3172 | 413 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WM8 | 37645 | 2024-10-14 | 2023-10-03 | 3.54 | 3.92 | 3.62 | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 14.85 | 0.00 | 1.963 | 8.64 | 0.00 | 7.3 | 92.7 | 0.0 | -2.51 | 0.59 | 0.76 | 1.77 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.22 | 0.00 | 2.358 | 7.63 | 1.23 | 7.2 | 92.8 | 0.0 | -1.95 | 0.39 | 0.56 | 0.73 | 1.52 | 16776 | 1055 | 5 | 0 | 1 | 0 | 8522 | logfile |
✔ | 8QPZ | 18570 | 2024-10-09 | 2023-10-03 | 2.5 | 2.74 | 2.49 | 2.9 | 0.004 | 0.70 | 0.0 | 0.05 | 10.84 | 0.00 | 2.495 | 9.26 | 8.57 | 0.0 | 100.0 | 0.0 | -1.32 | 0.50 | 0.78 | 4.05 | 2.9 | 0.007 | 0.69 | 0.0 | 0.05 | 12.95 | 0.00 | 2.520 | 4.15 | 8.33 | 6.1 | 93.9 | 0.0 | -2.53 | 0.43 | 0.53 | 0.81 | 4.63 | 4116 | 612 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UF7 | 42185 | 2024-10-09 | 2023-10-03 | 3.2 | 2.40 | 3.23 | 2.0 | 0.005 | 0.70 | 0.0 | 0.05 | 18.21 | 0.01 | 2.204 | 18.82 | 0.89 | 12.8 | 86.6 | 0.6 | -2.23 | 0.68 | 0.67 | 1.77 | 2.1 | 0.005 | 0.74 | 0.0 | 0.05 | 18.48 | 0.01 | 2.487 | 16.88 | 7.61 | 12.6 | 86.8 | 0.6 | -2.27 | 0.30 | 0.68 | 0.67 | 1.43 | 3927 | 514 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WMi | 37653 | 2024-10-11 | 2023-10-03 | 3.53 | 4.01 | 3.72 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.40 | 0.00 | 2.226 | 3.76 | 0.00 | 5.3 | 94.7 | 0.0 | -1.01 | 0.74 | 0.77 | 1.61 | 3.9 | 0.002 | 0.60 | 0.0 | 0.04 | 17.64 | 0.00 | 2.440 | 5.47 | 1.31 | 5.5 | 94.5 | 0.0 | -0.86 | 0.45 | 0.75 | 0.79 | 2.04 | 10763 | 1237 | 3 | 39 | 4 | 0 | 0 | logfile |
✔ | 8WMC | 37649 | 2024-10-14 | 2023-10-03 | 2.9 | 3.27 | 3.05 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 14.80 | 0.00 | 2.108 | 1.47 | 0.00 | 2.6 | 97.4 | 0.0 | -0.05 | 0.70 | 0.83 | 3.00 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 17.03 | 0.00 | 2.358 | 3.07 | 1.85 | 2.9 | 97.1 | 0.0 | 0.39 | 0.40 | 0.69 | 0.85 | 2.73 | 16929 | 1983 | 4 | 38 | 4 | 0 | 0 | logfile |
✔ | 8QPV | 18563 | 2024-10-13 | 2023-10-03 | 4.0 | 3.74 | 3.84 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 13.78 | 0.00 | 2.138 | 10.79 | 0.34 | 6.3 | 93.6 | 0.1 | -0.37 | 0.70 | 0.82 | — | 3.7 | 0.004 | 0.82 | 0.0 | 0.04 | 15.95 | 0.00 | 1.721 | 8.87 | 3.02 | 6.7 | 93.3 | 0.1 | -0.29 | 0.40 | 0.70 | 0.83 | — | 14088 | 1802 | 7 | 0 | 23 | 0 | 0 | logfile |
✔ | 8WM4 | 37640 | 2024-10-12 | 2023-10-02 | 2.93 | 3.34 | 3.10 | 3.3 | 0.004 | 0.87 | 0.0 | 0.05 | 17.05 | 0.01 | 2.291 | 4.80 | 0.78 | 5.9 | 94.1 | 0.0 | -2.05 | 0.71 | 0.73 | 1.32 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 17.88 | 0.00 | 2.379 | 8.21 | 2.60 | 6.5 | 93.5 | 0.0 | -0.90 | 0.55 | 0.73 | 0.75 | 1.38 | 11530 | 1331 | 3 | 38 | 4 | 0 | 0 | logfile |
✔ | 8QPF | 18549 | 2024-10-11 | 2023-10-01 | 2.53 | 3.55 | 2.56 | 3.3 | 0.005 | 0.84 | 0.0 | 0.05 | 14.75 | 0.01 | 2.257 | 3.31 | 0.75 | 2.3 | 97.5 | 0.3 | -0.50 | 0.78 | 0.84 | 3.52 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 15.54 | 0.00 | 2.508 | 7.01 | 1.70 | 2.1 | 97.7 | 0.3 | 2.74 | 1.03 | 0.65 | 0.84 | 3.30 | 9085 | 1167 | 6 | 0 | 0 | 202 | 0 | logfile |
✔ | 8QPE | 18548 | 2024-10-11 | 2023-10-01 | 3.1 | 3.23 | 3.01 | 3.0 | 0.002 | 0.47 | 0.0 | 0.11 | 15.70 | 0.00 | 2.202 | 8.57 | 0.00 | 1.9 | 98.1 | 0.0 | 1.39 | 0.69 | 0.83 | 2.26 | 2.9 | 0.003 | 0.52 | 0.0 | 0.04 | 16.39 | 0.00 | 2.401 | 7.48 | 0.75 | 2.0 | 98.0 | 0.0 | 1.39 | 0.29 | 0.70 | 0.86 | 2.29 | 54566 | 6251 | 21 | 236 | 1 | 0 | 0 | logfile |
✔ | 8WLL | 37623 | 2024-10-09 | 2023-09-30 | 3.74 | 3.82 | 3.77 | 3.9 | 0.024 | 1.06 | 0.0 | 0.10 | 13.07 | 0.01 | 2.238 | 10.14 | 0.00 | 2.9 | 97.1 | 0.0 | 0.58 | 0.50 | 0.76 | 1.39 | 3.8 | 0.004 | 0.91 | 0.0 | 0.05 | 15.79 | 0.00 | 2.553 | 13.35 | 4.68 | 2.9 | 97.1 | 0.0 | 0.73 | 0.51 | 0.49 | 0.77 | 0.17 | 2815 | 389 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WLJ | 37621 | 2024-10-09 | 2023-09-30 | 3.6 | 3.72 | 3.64 | 3.7 | 0.005 | 0.82 | 1.0 | 0.05 | 14.05 | 0.01 | 2.283 | 8.82 | 0.00 | 2.5 | 97.5 | 0.0 | 0.69 | 0.50 | 0.75 | 2.07 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 16.59 | 0.01 | 2.408 | 9.68 | 3.47 | 1.9 | 98.1 | 0.0 | 1.32 | 1.05 | 0.49 | 0.74 | 1.80 | 4035 | 530 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WLR | 37629 | 2024-10-10 | 2023-09-30 | 3.12 | 3.43 | 3.11 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 16.12 | 0.00 | 2.266 | 4.86 | 0.14 | 1.9 | 98.1 | 0.0 | 0.16 | 0.70 | 0.88 | 3.10 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 16.20 | 0.00 | 2.325 | 3.03 | 1.59 | 2.0 | 98.0 | 0.0 | 0.71 | 0.35 | 0.73 | 0.90 | 3.05 | 6431 | 792 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8WLM | 37624 | 2024-10-09 | 2023-09-30 | 3.57 | 3.69 | 3.72 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 14.40 | 0.00 | 2.198 | 10.34 | 0.00 | 3.4 | 96.6 | 0.0 | 0.52 | 0.43 | 0.74 | 1.11 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 16.75 | 0.00 | 2.598 | 11.04 | 2.38 | 3.4 | 96.6 | 0.0 | 1.02 | 0.48 | 0.44 | 0.75 | 1.16 | 2804 | 382 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WLK | 37622 | 2024-10-09 | 2023-09-30 | 3.37 | 3.55 | 3.44 | 3.6 | 0.006 | 0.91 | 0.0 | 0.05 | 15.66 | 0.01 | 2.227 | 9.42 | 0.00 | 2.6 | 97.4 | 0.0 | -0.01 | 0.44 | 0.72 | 1.86 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 17.35 | 0.00 | 2.469 | 10.45 | 5.32 | 1.8 | 98.2 | 0.0 | 0.82 | 1.04 | 0.43 | 0.73 | 1.88 | 2873 | 383 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WLD | 37616 | 2024-10-09 | 2023-09-29 | 3.48 | 3.88 | 3.62 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 12.16 | 0.00 | 2.045 | 6.46 | 0.02 | 5.5 | 94.3 | 0.2 | -0.13 | 0.77 | 0.80 | 1.90 | 3.7 | 0.005 | 0.66 | 0.0 | 0.05 | 14.02 | 0.00 | 2.298 | 6.75 | 1.50 | 8.0 | 91.9 | 0.1 | -0.18 | 0.48 | 0.78 | 0.83 | 1.93 | 48292 | 6850 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QoT | 18541 | 2024-10-10 | 2023-09-29 | 3.2 | 2.66 | 3.11 | 2.2 | 0.004 | 0.62 | 0.0 | 0.04 | 12.78 | 0.00 | 2.219 | 6.66 | 0.00 | 3.7 | 96.3 | 0.0 | 0.08 | 0.79 | 0.77 | 3.11 | 2.3 | 0.004 | 0.68 | 0.0 | 0.04 | 15.19 | 0.00 | 2.583 | 7.74 | 1.69 | 3.2 | 96.8 | 0.0 | 0.82 | 1.15 | 0.79 | 0.81 | 2.88 | 7493 | 968 | 5 | 0 | 0 | 0 | 0 | logfile |