Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Z4E	39762	2025-02-11	2024-04-17	3.0	2.37	3.12	2.1	0.003	0.61	1.0	0.05	12.62	0.00	2.230	8.56	0.00	6.1	93.4	0.5	-0.63	0.72	0.68	3.09	2.1	0.005	0.70	0.0	0.05	14.99	0.01	2.239	9.45	3.19	7.8	91.7	0.5	-0.82	2.54	0.74	0.73	3.00	6327	821	7	0	3	0	0	logfile
✔	8Z4E	39762	2025-03-11	2024-04-17	3.0	2.37	3.11	2.1	0.003	0.61	1.0	0.05	12.62	0.00	2.230	8.56	0.00	6.1	93.4	0.5	-0.63	0.72	0.68	3.09	2.1	0.004	0.70	0.0	0.05	14.87	0.01	2.254	9.12	2.90	7.7	91.8	0.5	-0.80	2.54	0.74	0.73	2.92	6327	821	7	0	3	0	0	logfile
✔	9BEW	44484	2024-08-09	2024-04-16	3.3	3.87	3.35	3.6	0.004	0.73	0.0	0.14	15.81	0.00	2.322	2.73	1.01	3.7	96.3	0.0	-3.67	0.78	0.83	2.92	3.6	0.003	0.63	0.0	0.04	13.99	0.00	2.149	4.80	1.91	4.3	95.7	0.0	-0.99	0.58	0.79	0.85	2.57	26100	3087	51	0	135	0	0	logfile
✔	9BER	44482	2024-11-20	2024-04-16	4.1	4.97	4.17	4.1	0.005	0.83	1.0	0.06	16.15	0.01	1.899	5.81	0.24	7.4	92.5	0.1	-2.06	0.83	0.81	—	4.2	0.012	0.73	0.0	0.05	12.72	0.01	2.398	13.27	0.00	8.1	91.9	0.0	-1.66	0.81	0.84	0.85	—	20350	2416	36	0	100	0	0	logfile
✔	9BER	44482	2024-09-28	2024-04-16	4.1	4.97	4.17	4.1	0.005	0.83	1.0	0.06	16.15	0.01	1.899	5.81	0.24	7.4	92.5	0.1	-2.06	0.83	0.81	—	4.2	0.012	0.73	0.0	0.05	12.72	0.01	2.398	13.27	0.00	8.1	91.9	0.0	-1.66	0.81	0.84	0.85	—	20350	2416	36	0	100	0	0	logfile
✔	9BER	44482	2024-08-07	2024-04-16	4.1	4.97	4.17	4.1	0.005	0.83	1.0	0.06	16.15	0.01	1.899	5.81	0.24	7.4	92.5	0.1	-2.06	0.83	0.81	—	4.2	0.012	0.73	0.0	0.05	12.72	0.01	2.398	13.27	0.00	8.1	91.9	0.0	-1.66	0.81	0.84	0.85	—	20350	2416	36	0	100	0	0	logfile
✔	9BER	44482	2025-01-23	2024-04-16	4.1	4.97	4.17	4.1	0.005	0.83	1.0	0.06	16.15	0.01	1.899	5.81	0.24	7.4	92.5	0.1	-2.06	0.83	0.81	—	4.2	0.012	0.68	0.0	0.05	12.65	0.00	2.395	11.77	0.00	8.0	92.0	0.0	-1.73	0.83	0.84	0.84	—	20350	2416	36	0	100	0	0	logfile
✔	9BF5	44490	2024-11-19	2024-04-16	3.07	2.31	3.11	2.0	0.002	0.50	0.0	0.04	16.90	0.00	2.131	5.28	0.00	5.7	94.3	0.0	-0.15	0.77	0.76	1.93	2.0	0.002	0.52	0.0	0.04	17.62	0.00	2.505	3.10	2.14	5.8	94.2	0.0	0.31	0.31	0.77	0.77	1.68	19742	2380	4	26	0	0	0	logfile
✔	9BF5	44490	2025-01-23	2024-04-16	3.07	2.31	3.11	2.0	0.002	0.50	0.0	0.04	16.90	0.00	2.131	5.28	0.00	5.7	94.3	0.0	-0.15	0.77	0.76	1.93	2.0	0.003	0.56	0.0	0.04	17.66	0.00	2.331	3.43	2.37	6.5	93.5	0.0	0.07	0.31	0.77	0.77	1.99	19742	2380	4	26	0	0	0	logfile
✔	9BF5	44490	2024-09-28	2024-04-16	3.07	2.31	3.11	2.0	0.002	0.50	0.0	0.04	16.90	0.00	2.131	5.28	0.00	5.7	94.3	0.0	-0.15	0.77	0.76	1.93	2.0	0.002	0.52	0.0	0.04	17.62	0.00	2.505	3.10	2.14	5.8	94.2	0.0	0.31	0.31	0.77	0.77	1.68	19742	2380	4	26	0	0	0	logfile
✔	9BF5	44490	2024-10-15	2024-04-16	3.07	2.31	3.11	2.0	0.002	0.50	0.0	0.04	16.90	0.00	2.131	5.28	0.00	5.7	94.3	0.0	-0.15	0.77	0.76	1.93	2.0	0.002	0.52	0.0	0.04	17.62	0.00	2.505	3.10	2.14	5.8	94.2	0.0	0.31	0.31	0.77	0.77	1.68	19742	2380	4	26	0	0	0	logfile
✔	9BF6	44491	2024-09-28	2024-04-16	4.5	7.51	4.66	4.5	0.003	0.67	2.0	0.05	12.77	0.00	2.022	3.80	0.10	8.4	91.4	0.2	-1.57	0.83	0.78	—	4.5	0.003	0.69	0.0	0.05	12.86	0.00	2.320	11.07	0.00	8.9	91.0	0.1	-1.56	0.88	0.84	0.80	—	20330	2367	39	0	130	0	0	logfile
✔	9BF6	44491	2025-01-23	2024-04-16	4.5	7.51	4.66	4.5	0.003	0.67	2.0	0.05	12.77	0.00	2.022	3.80	0.10	8.4	91.4	0.2	-1.57	0.83	0.78	—	4.5	0.003	0.69	0.0	0.05	12.86	0.00	2.356	11.90	0.00	8.8	91.0	0.1	-1.52	0.87	0.84	0.81	—	20330	2367	39	0	130	0	0	logfile
✔	8Z40	39759	2025-01-24	2024-04-16	3.26	3.96	3.30	3.6	0.003	0.66	0.0	0.04	16.15	0.01	2.201	7.97	0.13	5.2	94.6	0.2	0.15	0.88	0.86	2.25	3.6	0.003	0.59	0.0	0.04	16.53	0.00	2.462	5.31	1.56	4.9	95.0	0.1	0.74	0.35	0.88	0.87	2.09	21893	2810	6	0	0	0	0	logfile
✔	9BF1	44486	2025-01-22	2024-04-16	3.1	2.28	3.13	3.8	0.003	0.48	0.0	0.04	14.85	0.00	2.174	7.67	0.00	5.3	94.7	0.0	0.71	0.47	0.28	0.12	2.0	0.003	0.56	0.0	0.04	17.07	0.00	2.518	8.77	1.65	4.4	95.6	0.0	0.71	1.45	0.72	0.73	1.93	18158	2244	2	0	0	0	0	logfile
✔	9BF1	44486	2024-09-28	2024-04-16	3.1	2.28	3.13	3.8	0.003	0.48	0.0	0.04	14.85	0.00	2.174	7.67	0.00	5.3	94.7	0.0	0.71	0.47	0.28	0.12	2.0	0.003	0.57	0.0	0.04	17.08	0.00	2.483	9.41	1.90	4.5	95.5	0.0	0.67	1.45	0.72	0.73	2.05	18158	2244	2	0	0	0	0	logfile
✔	9BF1	44486	2024-11-19	2024-04-16	3.1	2.28	3.13	3.8	0.003	0.48	0.0	0.04	14.85	0.00	2.174	7.67	0.00	5.3	94.7	0.0	0.71	0.47	0.28	0.12	2.0	0.003	0.57	0.0	0.04	17.08	0.00	2.483	9.41	1.90	4.5	95.5	0.0	0.67	1.45	0.72	0.73	2.05	18158	2244	2	0	0	0	0	logfile
✔	9BF1	44486	2024-10-14	2024-04-16	3.1	2.28	3.13	3.8	0.003	0.48	0.0	0.04	14.85	0.00	2.174	7.67	0.00	5.3	94.7	0.0	0.71	0.47	0.28	0.12	2.0	0.003	0.57	0.0	0.04	17.08	0.00	2.483	9.41	1.90	4.5	95.5	0.0	0.67	1.45	0.72	0.73	2.05	18158	2244	2	0	0	0	0	logfile
✔	9BF6	44491	2024-08-07	2024-04-16	4.5	7.51	4.66	4.5	0.003	0.67	2.0	0.05	12.77	0.00	2.022	3.80	0.10	8.4	91.4	0.2	-1.57	0.83	0.78	—	4.5	0.003	0.69	0.0	0.05	12.86	0.00	2.320	11.07	0.00	8.9	91.0	0.1	-1.56	0.88	0.84	0.80	—	20330	2367	39	0	130	0	0	logfile
✔	9BF6	44491	2024-11-19	2024-04-16	4.5	7.51	4.66	4.5	0.003	0.67	2.0	0.05	12.77	0.00	2.022	3.80	0.10	8.4	91.4	0.2	-1.57	0.83	0.78	—	4.5	0.003	0.69	0.0	0.05	12.86	0.00	2.320	11.07	0.00	8.9	91.0	0.1	-1.56	0.88	0.84	0.80	—	20330	2367	39	0	130	0	0	logfile

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