Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BEi	44479	2024-08-03	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.004	0.77	0.0	0.05	14.62	0.01	2.461	21.84	0.00	9.3	90.6	0.1	-1.64	0.52	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2025-01-14	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.003	0.73	0.0	0.04	14.57	0.01	2.444	15.81	0.00	8.1	91.8	0.1	-1.44	0.43	0.85	0.73	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2025-02-11	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.003	0.73	0.0	0.04	14.57	0.01	2.444	15.81	0.00	8.1	91.8	0.1	-1.44	0.43	0.85	0.73	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2025-03-11	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.002	0.72	0.0	0.04	14.43	0.00	2.455	13.44	0.00	7.6	92.3	0.1	-1.22	0.45	0.84	0.72	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-12-27	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.004	0.77	0.0	0.05	14.62	0.01	2.461	21.84	0.00	9.3	90.6	0.1	-1.64	0.52	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-11-14	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.004	0.77	0.0	0.05	14.62	0.01	2.461	21.84	0.00	9.3	90.6	0.1	-1.64	0.52	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-10-10	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.004	0.77	0.0	0.05	14.62	0.01	2.461	21.84	0.00	9.3	90.6	0.1	-1.64	0.52	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-09-24	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.004	0.77	0.0	0.05	14.62	0.01	2.461	21.84	0.00	9.3	90.6	0.1	-1.64	0.52	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-06-25	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.005	0.81	0.0	0.05	14.48	0.01	2.094	30.93	0.00	11.7	88.3	0.0	-1.86	0.48	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEi	44479	2024-07-19	2024-04-15	4.16	4.77	4.14	4.2	0.003	0.78	0.0	0.05	14.43	0.01	2.016	21.15	0.00	9.2	90.7	0.1	-1.93	0.85	0.73	—	4.2	0.005	0.81	0.0	0.05	14.48	0.01	2.094	30.93	0.00	11.7	88.3	0.0	-1.85	0.48	0.85	0.74	—	6649	862	5	0	0	0	0	logfile
✔	9BEE	44477	2025-01-13	2024-04-15	3.4	3.98	3.21	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.58	0.0	0.05	15.83	0.00	2.356	6.19	3.45	3.8	96.2	0.0	-0.44	1.53	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9BEE	44477	2025-03-05	2024-04-15	3.4	3.98	3.20	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.57	0.0	0.05	15.77	0.00	2.346	6.84	3.45	4.9	95.1	0.0	-0.50	1.59	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9BEE	44477	2025-02-10	2024-04-15	3.4	3.98	3.21	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.58	0.0	0.05	15.83	0.00	2.356	6.19	3.45	3.8	96.2	0.0	-0.44	1.53	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9BEE	44477	2024-12-27	2024-04-15	3.4	3.98	3.21	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.58	0.0	0.05	15.70	0.00	2.275	5.87	3.45	5.4	94.6	0.0	-0.63	1.54	0.50	0.68	2.02	3046	189	2	0	7	0	1501	logfile
✔	9EZM	50089	2025-01-21	2024-04-12	2.9	2.91	2.78	2.9	0.004	0.69	0.0	0.05	13.38	0.01	2.054	2.95	0.00	1.7	98.3	0.0	-1.94	0.55	0.87	3.26	2.9	0.005	0.68	0.0	0.05	16.92	0.00	2.460	1.87	4.05	2.6	97.4	0.0	-0.15	1.20	0.55	0.89	3.19	68022	8766	18	0	0	0	0	logfile
✔	8Z27	39743	2024-12-30	2024-04-12	2.86	3.87	2.96	3.2	0.007	1.41	9.0	0.11	24.39	0.02	2.290	7.15	32.69	1.4	98.2	0.4	3.16	0.64	0.48	0.87	3.2	0.004	0.82	0.0	0.05	18.30	0.01	2.499	15.95	3.95	4.6	95.3	0.1	-0.01	1.35	0.78	0.75	0.73	8596	1047	8	0	14	0	0	logfile
✔	8Z1V	39737	2025-02-14	2024-04-12	3.16	2.44	3.14	2.1	0.025	2.21	84.0	0.24	12.47	0.01	2.288	0.52	0.00	0.7	99.3	0.0	-0.95	0.68	0.72	3.64	2.2	0.004	0.63	0.0	0.04	15.95	0.00	2.536	5.11	1.95	1.6	98.4	0.0	1.48	1.17	0.78	0.82	2.42	9562	1234	6	0	2	0	0	logfile
✔	8Z27	39743	2025-01-19	2024-04-12	2.86	3.87	2.96	3.2	0.007	1.41	9.0	0.11	24.39	0.02	2.290	7.15	32.69	1.4	98.2	0.4	3.16	0.64	0.48	0.87	3.2	0.003	0.78	0.0	0.04	18.35	0.01	2.552	14.65	3.63	4.2	95.6	0.2	0.17	1.35	0.77	0.74	0.79	8596	1047	8	0	14	0	0	logfile
✔	8Z1W	39738	2025-02-14	2024-04-12	3.0	2.22	3.04	2.0	0.018	1.98	35.0	0.17	12.38	0.01	2.537	0.05	0.10	1.3	98.7	0.0	-0.48	0.67	0.73	4.77	2.0	0.004	0.93	1.0	0.05	16.02	0.00	2.524	5.24	1.75	1.7	98.3	0.0	1.65	0.48	0.78	0.82	3.52	9619	1237	6	0	3	0	0	logfile
✔	8Z1X	39739	2025-02-14	2024-04-12	3.2	2.35	3.21	2.1	0.019	2.02	43.0	1.50	13.05	0.01	1.925	0.41	0.00	1.2	98.8	0.0	-1.03	0.69	0.73	4.07	2.1	0.013	2.33	0.0	0.45	15.69	0.00	2.320	5.63	2.33	1.4	98.6	0.0	1.02	0.55	0.81	0.81	2.90	9648	1240	6	0	3	0	0	logfile

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