Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Z1V	39737	2025-03-14	2024-04-12	3.16	2.44	3.14	2.1	0.025	2.21	84.0	0.24	12.47	0.01	2.288	0.52	0.00	0.7	99.3	0.0	-0.95	0.68	0.72	3.64	2.2	0.003	0.62	0.0	0.04	16.06	0.00	2.524	5.06	2.05	1.7	98.3	0.0	1.47	1.17	0.78	0.81	2.43	9562	1234	6	0	2	0	0	logfile
✔	8Z1F	39726	2025-01-18	2024-04-11	4.3	4.91	4.67	4.5	0.002	0.52	0.0	0.04	18.29	0.00	1.966	6.76	0.00	5.3	94.1	0.6	0.23	0.74	0.55	—	4.5	0.004	0.67	0.0	0.05	19.18	0.00	1.753	14.17	0.00	9.9	89.7	0.5	-1.72	1.26	0.77	0.64	—	12569	668	3	66	3	0	5934	logfile
✔	8Z1F	39726	2024-12-30	2024-04-11	4.3	4.91	4.67	4.5	0.002	0.52	0.0	0.04	18.29	0.00	1.966	6.76	0.00	5.3	94.1	0.6	0.23	0.74	0.55	—	4.5	0.002	0.62	0.0	0.05	19.18	0.00	1.795	9.23	0.00	9.0	90.4	0.6	-1.55	1.37	0.77	0.63	—	12569	668	3	66	3	0	5934	logfile
✔	9BD8	44446	2025-01-14	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.65	0.0	0.04	13.24	0.00	2.532	21.15	0.00	8.8	91.2	0.0	-2.46	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2025-02-11	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.65	0.0	0.04	13.24	0.00	2.532	21.15	0.00	8.8	91.2	0.0	-2.46	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2025-03-06	2024-04-11	4.8	6.12	4.01	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.66	0.0	0.04	13.27	0.00	2.535	20.86	0.00	8.9	91.1	0.0	-2.58	0.32	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2024-12-27	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.63	0.0	0.04	13.11	0.00	2.534	19.03	0.00	7.8	92.2	0.0	-2.44	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	8Z1E	39724	2024-06-25	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.004	0.54	0.0	0.04	15.39	0.00	2.280	5.94	3.92	1.9	98.1	0.0	2.53	0.31	0.65	0.86	1.61	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-08-03	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.52	0.0	0.04	15.26	0.00	2.470	4.87	4.36	1.6	98.4	0.0	2.40	0.30	0.66	0.86	1.54	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-09-24	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.52	0.0	0.04	15.26	0.00	2.470	4.87	4.36	1.6	98.4	0.0	2.40	0.30	0.66	0.86	1.54	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-10-10	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.52	0.0	0.04	15.26	0.00	2.470	4.87	4.36	1.6	98.4	0.0	2.40	0.30	0.66	0.86	1.54	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-11-14	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.52	0.0	0.04	15.26	0.00	2.470	4.87	4.36	1.6	98.4	0.0	2.40	0.30	0.66	0.86	1.54	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-12-27	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.52	0.0	0.04	15.26	0.00	2.470	4.87	4.36	1.6	98.4	0.0	2.40	0.30	0.66	0.86	1.54	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2025-02-11	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.51	0.0	0.04	15.38	0.00	2.473	5.40	3.92	1.6	98.4	0.0	2.39	0.31	0.65	0.86	1.49	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2025-01-14	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.003	0.51	0.0	0.04	15.38	0.00	2.473	5.40	3.92	1.6	98.4	0.0	2.39	0.31	0.65	0.86	1.49	6516	834	3	0	0	0	0	logfile
✔	8Z1E	39724	2024-07-19	2024-04-11	3.12	3.44	3.19	3.4	0.002	0.43	0.0	0.03	14.56	0.00	2.273	4.34	0.44	1.2	98.8	0.0	0.87	0.57	0.82	1.73	3.4	0.004	0.54	0.0	0.04	15.39	0.00	2.280	5.94	3.92	1.9	98.1	0.0	2.53	0.31	0.65	0.86	1.61	6516	834	3	0	0	0	0	logfile
✔	9BDD	44449	2025-01-18	2024-04-11	2.86	2.19	2.86	2.2	0.004	0.70	0.0	0.06	17.26	0.01	2.249	5.54	0.26	1.8	98.2	0.0	0.22	0.61	0.60	3.11	2.0	0.003	0.58	0.0	0.04	18.98	0.00	2.466	6.66	2.81	2.3	97.7	0.0	1.49	1.03	0.78	0.79	2.77	12313	1397	7	61	1	0	0	logfile
✔	9BDD	44449	2024-09-26	2024-04-11	2.86	2.19	2.86	2.2	0.004	0.70	0.0	0.06	17.26	0.01	2.249	5.54	0.26	1.8	98.2	0.0	0.22	0.61	0.60	3.11	2.0	0.003	0.58	0.0	0.04	19.01	0.00	2.457	6.04	2.81	2.0	98.0	0.0	1.47	1.02	0.78	0.79	2.58	12313	1397	7	61	1	0	0	logfile
✔	9BDD	44449	2024-10-12	2024-04-11	2.86	2.19	2.86	2.2	0.004	0.70	0.0	0.06	17.26	0.01	2.249	5.54	0.26	1.8	98.2	0.0	0.22	0.61	0.60	3.11	2.0	0.003	0.58	0.0	0.04	19.01	0.00	2.457	6.04	2.81	2.0	98.0	0.0	1.47	1.02	0.78	0.79	2.58	12313	1397	7	61	1	0	0	logfile
✔	9BDD	44449	2024-11-17	2024-04-11	2.86	2.19	2.86	2.2	0.004	0.70	0.0	0.06	17.26	0.01	2.249	5.54	0.26	1.8	98.2	0.0	0.22	0.61	0.60	3.11	2.0	0.003	0.58	0.0	0.04	19.01	0.00	2.457	6.04	2.81	2.0	98.0	0.0	1.47	1.02	0.78	0.79	2.58	12313	1397	7	61	1	0	0	logfile

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