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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BAZ | 44415 | 2024-10-10 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.88 | 0.00 | 2.437 | 9.22 | 3.14 | 3.3 | 96.7 | 0.0 | 0.27 | 0.30 | 0.71 | 0.72 | 2.49 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-01-15 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.004 | 0.67 | 0.0 | 0.04 | 16.88 | 0.00 | 2.426 | 9.84 | 4.15 | 3.6 | 96.4 | 0.0 | 0.19 | 0.29 | 0.72 | 0.72 | 2.60 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-02-12 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.004 | 0.67 | 0.0 | 0.04 | 16.88 | 0.00 | 2.426 | 9.84 | 4.15 | 3.6 | 96.4 | 0.0 | 0.19 | 0.29 | 0.72 | 0.72 | 2.60 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-03-13 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.86 | 0.00 | 2.417 | 9.47 | 3.02 | 3.4 | 96.6 | 0.0 | 0.19 | 0.29 | 0.71 | 0.72 | 2.38 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2024-08-03 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.88 | 0.00 | 2.437 | 9.22 | 3.14 | 3.3 | 96.7 | 0.0 | 0.27 | 0.30 | 0.71 | 0.72 | 2.49 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2024-07-23 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.318 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.003 | 0.50 | 0.0 | 0.05 | 16.62 | 0.00 | 2.164 | 6.49 | 3.39 | 1.9 | 98.1 | 0.0 | 2.89 | 0.95 | 0.67 | 0.89 | 1.89 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2025-01-25 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.031 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.004 | 0.56 | 0.0 | 0.05 | 16.82 | 0.00 | 2.541 | 5.51 | 2.92 | 2.7 | 97.3 | 0.0 | 2.50 | 0.96 | 0.68 | 0.89 | 1.85 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2024-09-29 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.031 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.004 | 0.54 | 0.0 | 0.05 | 16.75 | 0.00 | 2.540 | 5.78 | 4.31 | 2.4 | 97.6 | 0.0 | 2.71 | 0.96 | 0.68 | 0.89 | 1.78 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2024-08-08 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.318 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.005 | 0.85 | 2.0 | 0.05 | 16.65 | 0.00 | 2.226 | 6.16 | 3.35 | 1.1 | 98.9 | 0.0 | 3.16 | 0.49 | 0.67 | 0.88 | 1.76 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2025-03-13 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 15.60 | 0.00 | 2.440 | 14.35 | 3.49 | 4.9 | 95.1 | 0.0 | 0.04 | 1.19 | 0.82 | 0.84 | 1.96 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-10-10 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-12-28 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-11-15 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2025-01-15 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.004 | 0.88 | 0.0 | 0.05 | 15.57 | 0.00 | 2.450 | 11.40 | 3.37 | 4.6 | 95.3 | 0.1 | 0.25 | 1.19 | 0.82 | 0.83 | 1.95 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2025-02-13 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.004 | 0.88 | 0.0 | 0.05 | 15.57 | 0.00 | 2.450 | 11.40 | 3.37 | 4.6 | 95.3 | 0.1 | 0.25 | 1.19 | 0.82 | 0.83 | 1.95 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9EWQ | 50022 | 2024-09-26 | 2024-04-04 | 3.0 | 3.34 | 3.05 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.59 | 0.00 | 2.141 | 4.88 | 0.08 | 5.2 | 94.8 | 0.0 | -1.34 | 0.82 | 0.88 | 4.02 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 15.08 | 0.00 | 2.303 | 3.67 | 2.11 | 4.7 | 95.3 | 0.0 | -1.15 | 0.23 | 0.77 | 0.89 | 3.55 | 11904 | 1540 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWQ | 50022 | 2024-12-30 | 2024-04-04 | 3.0 | 3.34 | 3.05 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.59 | 0.00 | 2.141 | 4.88 | 0.08 | 5.2 | 94.8 | 0.0 | -1.34 | 0.82 | 0.88 | 4.02 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 15.08 | 0.00 | 2.303 | 3.67 | 2.11 | 4.7 | 95.3 | 0.0 | -1.15 | 0.23 | 0.77 | 0.89 | 3.55 | 11904 | 1540 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWQ | 50022 | 2025-01-18 | 2024-04-04 | 3.0 | 3.34 | 3.05 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.59 | 0.00 | 2.141 | 4.88 | 0.08 | 5.2 | 94.8 | 0.0 | -1.34 | 0.82 | 0.88 | 4.02 | 3.3 | 0.004 | 0.80 | 1.0 | 0.05 | 15.06 | 0.00 | 2.361 | 3.71 | 1.73 | 3.3 | 96.7 | 0.0 | -1.04 | 0.22 | 0.76 | 0.88 | 3.49 | 11904 | 1540 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWQ | 50022 | 2024-10-12 | 2024-04-04 | 3.0 | 3.34 | 3.05 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.59 | 0.00 | 2.141 | 4.88 | 0.08 | 5.2 | 94.8 | 0.0 | -1.34 | 0.82 | 0.88 | 4.02 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 15.08 | 0.00 | 2.303 | 3.67 | 2.11 | 4.7 | 95.3 | 0.0 | -1.15 | 0.23 | 0.77 | 0.89 | 3.55 | 11904 | 1540 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWQ | 50022 | 2024-11-16 | 2024-04-04 | 3.0 | 3.34 | 3.05 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.59 | 0.00 | 2.141 | 4.88 | 0.08 | 5.2 | 94.8 | 0.0 | -1.34 | 0.82 | 0.88 | 4.02 | 3.3 | 0.004 | 0.57 | 0.0 | 0.05 | 15.08 | 0.00 | 2.303 | 3.67 | 2.11 | 4.7 | 95.3 | 0.0 | -1.15 | 0.23 | 0.77 | 0.89 | 3.55 | 11904 | 1540 | 4 | 0 | 0 | 0 | 0 | logfile |