Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9CXJ	45993	2024-12-29	2024-07-31	3.1	3.43	3.24	3.5	0.004	0.75	0.0	0.05	14.80	0.01	1.970	5.94	1.42	3.0	97.0	0.0	-0.11	0.65	0.76	3.21	3.5	0.003	0.62	0.0	0.04	16.51	0.00	2.011	9.18	1.51	3.2	96.8	0.0	1.54	0.36	0.65	0.75	2.07	10227	1237	6	0	4	0	0	logfile
✔	9CXF	45988	2025-03-06	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.799	6.03	0.00	0.0	0.0	0.0	—	0.37	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✘	9CXB	45984	2025-05-16	2024-07-31	3.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14479	1749	16	0	22	0	0	logfile
✘	9CXB	45984	2025-06-12	2024-07-31	3.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14479	1749	16	0	22	0	0	logfile
✔	9CXF	45988	2025-02-11	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.792	5.56	0.00	0.0	0.0	0.0	—	0.38	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✔	9iZ0	61006	2025-06-28	2024-07-31	3.63	3.94	3.73	3.8	0.004	0.73	1.0	0.04	17.04	0.00	2.148	13.83	1.29	5.9	93.8	0.2	0.48	0.70	0.62	0.81	3.8	0.010	0.76	0.0	0.04	16.75	0.00	2.425	11.38	4.06	6.0	93.9	0.1	0.48	1.13	0.71	0.63	0.54	32048	4862	5	0	2	0	0	logfile
✔	9iZ0	61006	2025-05-29	2024-07-31	3.63	3.94	3.73	3.8	0.004	0.73	1.0	0.04	17.04	0.00	2.148	13.83	1.29	5.9	93.8	0.2	0.48	0.70	0.62	0.81	3.8	0.010	0.74	0.0	0.04	16.78	0.00	2.432	10.68	4.42	5.9	94.1	0.1	0.56	1.13	0.71	0.63	0.49	32048	4862	5	0	2	0	0	logfile
✔	9CXF	45988	2025-04-27	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.799	6.03	0.00	0.0	0.0	0.0	—	0.37	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✔	9CXF	45988	2025-06-04	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.799	6.03	0.00	0.0	0.0	0.0	—	0.37	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✔	9CXF	45988	2025-07-23	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.799	6.03	0.00	0.0	0.0	0.0	—	0.37	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✔	9CXF	45988	2025-05-09	2024-07-31	3.02	3.58	3.03	3.3	0.006	0.68	0.0	0.04	25.40	0.00	1.874	7.88	0.00	0.0	0.0	0.0	—	0.92	0.90	—	3.3	0.008	0.72	0.0	0.04	24.51	0.00	1.792	5.56	0.00	0.0	0.0	0.0	—	0.38	0.93	0.92	—	4318	0	2	200	22	0	0	logfile
✔	9iZ7	61024	2025-06-11	2024-07-31	4.32	4.34	4.12	4.1	0.015	0.92	1.0	0.04	6.95	0.01	2.100	8.30	0.00	8.7	90.6	0.7	-0.91	0.55	0.54	—	4.1	0.006	1.03	0.0	0.05	8.25	0.01	2.350	4.37	0.00	16.1	83.6	0.3	-2.55	2.01	0.58	0.68	—	12996	2611	1	0	0	0	0	logfile
✔	9iZ7	61024	2025-07-31	2024-07-31	4.32	4.34	4.12	4.1	0.015	0.92	1.0	0.04	6.95	0.01	2.100	8.30	0.00	8.7	90.6	0.7	-0.91	0.55	0.54	—	4.1	0.006	1.03	0.0	0.05	8.25	0.01	2.350	4.37	0.00	16.1	83.6	0.3	-2.55	2.01	0.58	0.68	—	12996	2611	1	0	0	0	0	logfile
✔	9iZ7	61024	2025-05-15	2024-07-31	4.32	4.34	4.12	4.1	0.015	0.92	1.0	0.04	6.95	0.01	2.100	8.30	0.00	8.7	90.6	0.7	-0.91	0.55	0.54	—	4.1	0.005	0.96	0.0	0.04	8.02	0.01	2.369	3.61	0.00	15.7	84.0	0.3	-2.43	2.02	0.58	0.68	—	12996	2611	1	0	0	0	0	logfile
✔	9iYY	61004	2025-07-23	2024-07-31	3.13	3.38	0.95	3.4	0.004	0.58	0.0	0.04	12.05	0.00	2.275	8.29	6.12	4.6	95.4	0.0	-0.76	0.66	0.80	4.04	3.4	0.003	0.58	0.0	0.04	14.14	0.00	2.555	5.25	3.60	3.4	96.6	0.0	0.12	0.36	0.59	0.78	2.35	2534	342	4	0	0	0	0	logfile
✔	9iYX	61003	2025-03-05	2024-07-31	3.6	3.14	2.42	3.2	0.004	0.78	1.0	0.04	12.81	0.01	2.132	11.46	0.40	2.7	97.3	0.0	1.26	0.44	0.67	2.43	3.2	0.003	0.66	0.0	0.04	14.47	0.01	2.620	6.72	3.56	1.5	98.5	0.0	3.10	1.63	0.45	0.71	2.35	2626	351	4	0	2	0	0	logfile
✔	9CX9	45982	2024-12-27	2024-07-31	3.34	3.58	3.32	3.5	0.003	0.67	0.0	0.04	14.88	0.00	2.285	7.59	0.21	2.7	97.3	0.0	-0.81	0.77	0.77	2.41	3.5	0.003	0.64	0.0	0.04	16.26	0.00	2.560	5.61	5.45	3.8	96.2	0.0	-0.85	0.50	0.80	0.80	2.17	4631	609	5	0	0	0	0	logfile
✔	9CX9	45982	2025-07-23	2024-07-31	3.34	3.58	3.32	3.5	0.003	0.67	0.0	0.04	14.88	0.00	2.285	7.59	0.21	2.7	97.3	0.0	-0.81	0.77	0.77	2.41	3.5	0.003	0.64	0.0	0.04	16.33	0.00	2.496	5.83	6.50	3.4	96.6	0.0	-0.72	0.48	0.80	0.80	2.17	4631	609	5	0	0	0	0	logfile
✔	9CX9	45982	2025-06-05	2024-07-31	3.34	3.58	3.32	3.5	0.003	0.67	0.0	0.04	14.88	0.00	2.285	7.59	0.21	2.7	97.3	0.0	-0.81	0.77	0.77	2.41	3.5	0.003	0.64	0.0	0.04	16.33	0.00	2.496	5.83	6.50	3.4	96.6	0.0	-0.72	0.48	0.80	0.80	2.17	4631	609	5	0	0	0	0	logfile
✔	9CX9	45982	2025-05-10	2024-07-31	3.34	3.58	3.32	3.5	0.003	0.67	0.0	0.04	14.88	0.00	2.285	7.59	0.21	2.7	97.3	0.0	-0.81	0.77	0.77	2.41	3.5	0.004	0.67	0.0	0.05	16.30	0.00	2.567	6.27	6.50	4.0	96.0	0.0	-0.97	0.47	0.80	0.81	2.17	4631	609	5	0	0	0	0	logfile

• ← previous
• Page 128 of 5055
• next →