Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	9N13	48804	2025-06-05	2025-01-24	3.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4424	269	4	0	12	0	2083	logfile
✔	9N0Z	48799	2025-07-29	2025-01-24	3.5	3.76	3.54	3.7	0.006	0.78	0.0	0.05	16.26	0.02	1.559	9.80	0.00	9.8	90.2	0.0	-2.66	0.72	0.82	1.59	3.7	0.003	0.68	0.0	0.04	17.58	0.00	2.424	6.43	3.05	5.9	94.1	0.1	-0.95	1.10	0.72	0.83	1.26	10847	1355	4	0	0	0	0	logfile
✔	9N0X	48797	2025-07-24	2025-01-24	3.3	3.55	3.37	3.6	0.008	0.96	0.0	0.04	23.18	0.01	2.210	8.45	0.29	4.0	96.0	0.0	1.18	0.64	0.77	1.69	3.6	0.003	0.52	0.0	0.04	19.40	0.00	2.498	4.53	2.91	3.7	96.3	0.0	1.61	0.80	0.63	0.77	1.26	6588	760	4	0	8	0	0	logfile
✔	9N17	48808	2025-06-05	2025-01-24	3.09	3.77	2.85	3.6	0.015	1.66	0.0	0.10	14.20	0.01	2.570	0.22	0.40	8.3	91.4	0.4	-1.34	0.48	0.77	5.31	3.5	0.003	0.59	0.0	0.04	11.75	0.00	2.404	1.74	1.62	6.0	94.0	0.0	-0.81	0.73	0.50	0.81	5.16	4454	268	4	0	13	0	2095	logfile
✘	9N13	48804	2025-07-23	2025-01-24	3.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4424	269	4	0	12	0	2083	logfile
✔	9N0Y	48798	2025-07-29	2025-01-24	3.71	3.97	3.77	3.9	0.004	0.71	0.0	0.04	14.46	0.00	1.884	8.15	0.00	10.0	90.0	0.0	-3.71	0.79	0.84	1.21	3.9	0.004	0.66	0.0	0.04	16.39	0.00	2.551	7.26	1.99	6.6	93.4	0.0	-1.21	0.62	0.80	0.85	1.14	10792	1350	4	0	0	0	0	logfile
✔	9N0X	48797	2025-05-10	2025-01-24	3.3	3.55	3.37	3.6	0.008	0.96	0.0	0.04	23.18	0.01	2.210	8.45	0.29	4.0	96.0	0.0	1.18	0.64	0.77	1.69	3.6	0.002	0.50	0.0	0.04	19.34	0.00	2.463	4.53	3.05	3.3	96.7	0.0	1.74	0.80	0.63	0.77	1.30	6588	760	4	0	8	0	0	logfile
✔	9N17	48808	2025-07-24	2025-01-24	3.09	3.77	2.85	3.6	0.015	1.66	0.0	0.10	14.20	0.01	2.570	0.22	0.40	8.3	91.4	0.4	-1.34	0.48	0.77	5.31	3.5	0.003	0.59	0.0	0.04	11.75	0.00	2.404	1.74	1.62	6.0	94.0	0.0	-0.81	0.73	0.50	0.81	5.16	4454	268	4	0	13	0	2095	logfile
✔	9MZU	48769	2025-05-19	2025-01-23	2.4	3.21	2.49	2.9	0.003	0.53	0.0	0.04	17.08	0.00	2.048	12.02	2.00	3.2	96.7	0.1	0.29	0.75	0.89	4.12	2.9	0.003	0.72	1.0	0.04	16.51	0.00	2.096	13.98	1.41	3.3	96.7	0.0	1.05	0.43	0.70	0.89	3.84	17517	2094	21	0	39	3	6	logfile
✔	9MZU	48769	2025-06-15	2025-01-23	2.4	3.21	2.49	2.9	0.003	0.53	0.0	0.04	17.08	0.00	2.048	12.02	2.00	3.2	96.7	0.1	0.29	0.75	0.89	4.12	2.9	0.003	0.74	1.0	0.05	16.54	0.00	2.067	13.89	1.41	3.5	96.4	0.0	0.98	0.43	0.70	0.89	3.86	17517	2094	21	0	39	3	6	logfile
✘	9MZT	48768	2025-06-24	2025-01-23	2.11	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28143	3392	101	0	53	0	0	logfile
✘	9MZT	48768	2025-05-26	2025-01-23	2.11	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28143	3392	101	0	53	0	0	logfile
✔	9LoN	63250	2025-07-23	2025-01-23	3.0	2.99	2.19	3.1	0.009	0.65	0.0	0.05	13.10	0.00	2.359	2.29	0.00	4.7	95.3	0.0	-3.50	0.45	0.92	6.73	3.1	0.003	0.44	0.0	0.05	14.94	0.00	2.626	0.88	0.69	2.6	97.4	0.0	-1.37	0.90	0.44	0.92	6.58	2772	396	6	0	0	0	0	logfile
✔	9LoN	63250	2025-06-04	2025-01-23	3.0	2.99	2.19	3.1	0.009	0.65	0.0	0.05	13.10	0.00	2.359	2.29	0.00	4.7	95.3	0.0	-3.50	0.45	0.92	6.73	3.1	0.003	0.44	0.0	0.05	14.94	0.00	2.626	0.88	0.69	2.6	97.4	0.0	-1.37	0.90	0.44	0.92	6.58	2772	396	6	0	0	0	0	logfile
✔	9LoN	63250	2025-04-26	2025-01-23	3.0	2.99	2.19	3.1	0.009	0.65	0.0	0.05	13.10	0.00	2.359	2.29	0.00	4.7	95.3	0.0	-3.50	0.45	0.92	6.73	3.1	0.003	0.44	0.0	0.05	14.94	0.00	2.626	0.88	0.69	2.6	97.4	0.0	-1.37	0.90	0.44	0.92	6.58	2772	396	6	0	0	0	0	logfile
✔	9LoN	63250	2025-05-09	2025-01-23	3.0	2.99	2.19	3.1	0.009	0.65	0.0	0.05	13.10	0.00	2.359	2.29	0.00	4.7	95.3	0.0	-3.50	0.45	0.92	6.73	3.1	0.004	0.46	0.0	0.05	15.09	0.00	2.622	1.06	1.39	2.9	97.1	0.0	-1.41	0.89	0.44	0.92	6.63	2772	396	6	0	0	0	0	logfile
✔	9LMo	63219	2025-07-25	2025-01-19	3.2	3.60	2.85	3.4	0.020	1.63	0.0	0.08	10.36	0.01	1.882	6.75	0.13	2.6	97.4	0.0	0.92	0.72	0.79	2.50	3.4	0.003	0.69	0.0	0.04	15.78	0.00	2.510	9.02	3.40	2.6	97.4	0.0	2.11	3.86	0.75	0.85	2.00	7332	939	4	0	0	0	0	logfile
✔	9MX3	48708	2025-04-27	2025-01-17	3.0	3.93	3.03	3.5	0.003	0.63	0.0	0.04	17.07	0.00	2.208	6.38	1.68	3.8	96.2	0.0	1.64	0.86	0.83	1.60	3.5	0.002	0.60	0.0	0.04	17.24	0.00	2.242	5.00	2.52	3.9	96.1	0.0	2.14	0.33	0.86	0.82	1.24	5929	641	4	33	1	0	0	logfile
✔	9LLD	63198	2025-05-18	2025-01-17	3.6	4.83	3.56	3.6	0.003	0.56	0.0	0.04	14.89	0.00	2.221	8.69	0.07	6.3	93.7	0.0	-0.60	0.86	0.61	1.72	3.7	0.003	0.56	0.0	0.04	15.06	0.00	2.592	5.82	3.01	6.5	93.5	0.0	-0.95	1.82	0.89	0.87	1.94	16287	2334	9	0	0	0	0	logfile
✔	9LKY	63188	2025-05-28	2025-01-17	3.93	4.25	4.04	4.1	0.004	0.60	0.0	0.04	15.03	0.00	1.998	7.88	0.00	5.6	94.4	0.0	-0.51	0.79	0.80	1.15	4.1	0.003	0.71	0.0	0.04	16.92	0.00	1.987	12.65	2.21	5.3	94.7	0.0	0.68	0.81	0.80	0.83	1.41	26308	3277	13	0	6	0	0	logfile

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