Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9DER	46794	2025-01-20	2024-08-29	3.9	5.17	4.02	4.0	0.003	0.56	0.0	0.05	15.30	0.00	2.080	5.89	0.90	3.7	96.3	0.0	-0.23	0.86	0.71	0.15	4.1	0.003	0.63	0.0	0.05	11.73	0.00	1.921	9.43	0.90	5.3	94.7	0.0	-0.66	1.78	0.88	0.75	0.09	14207	925	9	0	24	2	6843	logfile
✘	9DDE	46771	2024-12-31	2024-08-28	3.2	4.04	3.22	3.3	0.004	0.65	0.0	0.04	26.36	0.01	2.226	7.39	0.33	2.7	97.3	0.0	1.79	0.88	0.82	2.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15394	1147	18	324	5	0	0	logfile
✔	9DDE	46771	2025-01-20	2024-08-28	3.2	4.04	3.22	3.3	0.004	0.65	0.0	0.04	26.36	0.01	2.226	7.39	0.33	2.7	97.3	0.0	1.79	0.88	0.82	2.44	3.3	0.005	0.65	0.0	0.04	26.60	0.00	2.450	7.39	1.66	3.1	96.9	0.0	2.01	0.63	0.92	0.90	2.05	15394	1147	18	324	5	0	0	logfile
✔	9JBo	61321	2025-02-10	2024-08-27	3.39	3.02	2.41	3.3	0.005	0.76	0.0	0.05	18.29	0.00	2.444	13.61	0.00	6.1	93.9	0.0	-3.03	0.38	0.71	2.65	3.3	0.004	0.73	0.0	0.05	18.88	0.00	2.552	7.21	3.86	13.0	87.0	0.0	-2.06	1.02	0.41	0.75	1.60	1872	258	3	0	0	0	0	logfile
✔	9JBo	61321	2025-03-05	2024-08-27	3.39	3.02	2.39	3.3	0.005	0.76	0.0	0.05	18.29	0.00	2.444	13.61	0.00	6.1	93.9	0.0	-3.03	0.38	0.71	2.65	3.3	0.005	0.82	0.0	0.06	18.87	0.00	2.547	8.01	4.35	13.4	86.6	0.0	-2.23	1.04	0.41	0.75	1.60	1872	258	3	0	0	0	0	logfile
✔	9JBP	61322	2025-02-10	2024-08-27	3.18	2.96	1.89	3.2	0.003	0.70	0.0	0.05	16.94	0.00	2.424	10.13	0.00	2.6	97.4	0.0	-0.69	0.39	0.69	2.11	3.2	0.004	0.62	0.0	0.05	17.23	0.00	2.531	9.09	8.06	2.6	97.4	0.0	-1.81	1.17	0.32	0.70	2.26	2022	246	12	0	48	0	0	logfile
✔	9JBP	61322	2025-03-05	2024-08-27	3.18	2.96	1.87	4.1	0.003	0.70	0.0	0.05	16.94	0.00	2.424	10.13	0.00	2.6	97.4	0.0	-0.69	0.39	0.69	2.11	3.2	0.003	0.58	0.0	0.05	17.44	0.00	2.560	6.57	7.53	3.0	97.0	0.0	-1.64	1.16	0.32	0.70	2.98	2022	246	12	0	48	0	0	logfile
✔	9DBY	46728	2025-01-19	2024-08-24	2.8	3.83	2.83	2.8	0.004	0.66	0.0	0.04	26.42	0.00	2.249	7.40	0.23	2.6	97.4	0.0	2.14	0.86	0.74	0.79	2.9	0.005	0.67	0.0	0.04	26.49	0.00	2.489	8.51	1.76	3.0	97.0	0.0	1.90	0.94	0.93	0.90	1.69	14368	1081	17	296	5	0	0	logfile
✔	9JA5	61290	2025-02-12	2024-08-24	2.7	3.43	2.71	3.3	0.014	1.15	0.0	0.06	14.30	0.01	2.117	13.83	0.00	12.9	87.1	0.0	-2.73	0.62	0.83	2.49	3.3	0.003	0.72	0.0	0.04	18.07	0.00	2.548	7.88	1.07	6.1	93.9	0.0	1.83	0.97	0.57	0.78	1.24	8469	1002	12	0	0	123	0	logfile
✔	9JA5	61290	2024-12-28	2024-08-24	2.7	3.43	2.71	3.3	0.014	1.15	0.0	0.06	14.30	0.01	2.117	13.83	0.00	12.9	87.1	0.0	-2.73	0.62	0.83	2.49	3.3	0.003	0.72	0.0	0.04	17.97	0.00	2.614	8.13	0.96	6.3	93.7	0.0	1.86	0.97	0.54	0.76	1.17	8469	1002	12	0	0	123	0	logfile
✔	9DBY	46728	2024-12-30	2024-08-24	2.8	3.83	2.83	2.8	0.004	0.66	0.0	0.04	26.42	0.00	2.249	7.40	0.23	2.6	97.4	0.0	2.14	0.86	0.74	0.79	2.9	0.005	0.67	0.0	0.04	26.31	0.00	2.488	8.20	1.17	3.3	96.7	0.0	2.12	0.93	0.93	0.90	1.98	14368	1081	17	296	5	0	0	logfile
✔	9JA5	61290	2025-01-15	2024-08-24	2.7	3.43	2.71	3.3	0.014	1.15	0.0	0.06	14.30	0.01	2.117	13.83	0.00	12.9	87.1	0.0	-2.73	0.62	0.83	2.49	3.3	0.003	0.72	0.0	0.04	18.07	0.00	2.548	7.88	1.07	6.1	93.9	0.0	1.83	0.97	0.57	0.78	1.24	8469	1002	12	0	0	123	0	logfile
✔	9JA5	61290	2025-03-13	2024-08-24	2.7	3.43	2.70	3.3	0.014	1.15	0.0	0.06	14.30	0.01	2.117	13.83	0.00	12.9	87.1	0.0	-2.73	0.62	0.83	2.49	3.3	0.003	0.70	0.0	0.04	18.06	0.00	2.588	7.64	1.92	7.0	93.0	0.0	1.84	0.97	0.54	0.75	1.19	8469	1002	12	0	0	123	0	logfile
✔	9JA6	61291	2024-12-27	2024-08-24	4.4	3.40	4.33	5.3	0.008	0.94	0.0	0.04	16.51	0.00	2.211	19.59	9.56	2.8	97.2	0.0	-1.98	0.69	0.60	—	5.2	0.003	0.63	0.0	0.04	13.21	0.00	2.392	8.19	0.00	0.9	99.1	0.0	3.07	1.12	0.70	0.77	—	4880	588	4	0	0	0	0	logfile
✔	9JA6	61291	2025-01-14	2024-08-24	4.4	3.40	4.33	5.3	0.008	0.94	0.0	0.04	16.51	0.00	2.211	19.59	9.56	2.8	97.2	0.0	-1.98	0.69	0.60	—	5.3	0.002	0.61	0.0	0.04	12.99	0.00	2.394	7.46	0.00	0.7	99.3	0.0	3.13	1.55	0.71	0.76	—	4880	588	4	0	0	0	0	logfile
✔	9JA6	61291	2025-03-06	2024-08-24	4.4	3.40	4.32	5.3	0.008	0.94	0.0	0.04	16.51	0.00	2.211	19.59	9.56	2.8	97.2	0.0	-1.98	0.69	0.60	—	5.3	0.003	0.63	0.0	0.04	13.21	0.00	2.395	8.40	0.00	1.2	98.8	0.0	3.19	1.55	0.71	0.77	—	4880	588	4	0	0	0	0	logfile
✔	9JA6	61291	2025-02-11	2024-08-24	4.4	3.40	4.33	5.3	0.008	0.94	0.0	0.04	16.51	0.00	2.211	19.59	9.56	2.8	97.2	0.0	-1.98	0.69	0.60	—	5.3	0.002	0.61	0.0	0.04	12.99	0.00	2.394	7.46	0.00	0.7	99.3	0.0	3.13	1.55	0.71	0.76	—	4880	588	4	0	0	0	0	logfile
✘	9JA0	61286	2024-10-15	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19716	2628	12	0	0	0	0	logfile
✔	9JA0	61286	2025-01-23	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.52	0.0	0.04	14.28	0.00	2.638	4.40	0.80	4.3	95.7	0.0	1.01	0.94	0.72	0.85	2.67	19716	2628	12	0	0	0	0	logfile
✔	9JA0	61286	2024-09-28	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.53	0.0	0.04	14.29	0.00	2.643	4.79	1.10	4.6	95.4	0.0	0.91	0.94	0.72	0.85	2.72	19716	2628	12	0	0	0	0	logfile

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