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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9CHV | 45603 | 2024-12-27 | 2024-07-02 | 3.95 | 4.29 | 3.77 | 4.3 | 0.009 | 1.53 | 33.0 | 0.11 | 15.28 | 0.01 | 2.106 | 11.74 | 4.86 | 6.9 | 93.1 | 0.0 | -1.78 | 0.65 | 0.66 | 0.86 | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 16.64 | 0.00 | 2.402 | 7.18 | 3.79 | 4.1 | 95.9 | 0.0 | -0.42 | 1.42 | 0.70 | 0.74 | 0.97 | 6644 | 873 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CHX | 45604 | 2024-12-27 | 2024-07-02 | 3.5 | 3.91 | 3.87 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.88 | 0.00 | 2.146 | 9.43 | 0.00 | 4.9 | 95.1 | 0.0 | -0.53 | 0.65 | 0.68 | 2.27 | 3.9 | 0.002 | 0.64 | 0.0 | 0.04 | 16.48 | 0.00 | 2.492 | 6.76 | 2.23 | 3.3 | 96.7 | 0.0 | -0.03 | 0.45 | 0.64 | 0.72 | 1.09 | 7129 | 889 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2024-12-27 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 15.95 | 0.00 | 2.126 | 4.68 | 2.58 | 5.2 | 94.8 | 0.0 | 0.01 | 0.47 | 0.71 | 0.82 | 1.44 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9iMA | 60686 | 2024-10-10 | 2024-07-02 | 2.65 | 3.02 | 2.78 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.29 | 0.01 | 2.292 | 4.08 | 0.00 | 4.3 | 95.7 | 0.0 | 0.12 | 0.57 | 0.86 | 3.50 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.540 | 3.95 | 2.19 | 4.6 | 95.2 | 0.1 | 1.16 | 0.39 | 0.58 | 0.88 | 3.79 | 7472 | 933 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9iMA | 60686 | 2024-09-24 | 2024-07-02 | 2.65 | 3.02 | 2.78 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.29 | 0.01 | 2.292 | 4.08 | 0.00 | 4.3 | 95.7 | 0.0 | 0.12 | 0.57 | 0.86 | 3.50 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.540 | 3.95 | 2.19 | 4.6 | 95.2 | 0.1 | 1.16 | 0.39 | 0.58 | 0.88 | 3.79 | 7472 | 933 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9iM6 | 60685 | 2024-12-28 | 2024-07-02 | 3.21 | 3.45 | 3.24 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 18.98 | 0.01 | 2.142 | 7.20 | 0.20 | 6.4 | 93.2 | 0.4 | 1.15 | 0.65 | 0.84 | 1.89 | 3.4 | 0.005 | 0.66 | 0.0 | 0.04 | 18.95 | 0.00 | 2.570 | 6.59 | 1.72 | 6.4 | 93.4 | 0.3 | 1.41 | 0.30 | 0.65 | 0.84 | 2.10 | 8982 | 1134 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9iMA | 60686 | 2024-11-14 | 2024-07-02 | 2.65 | 3.02 | 2.78 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.29 | 0.01 | 2.292 | 4.08 | 0.00 | 4.3 | 95.7 | 0.0 | 0.12 | 0.57 | 0.86 | 3.50 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.540 | 3.95 | 2.19 | 4.6 | 95.2 | 0.1 | 1.16 | 0.39 | 0.58 | 0.88 | 3.79 | 7472 | 933 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9iMA | 60686 | 2024-12-28 | 2024-07-02 | 2.65 | 3.02 | 2.78 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.29 | 0.01 | 2.292 | 4.08 | 0.00 | 4.3 | 95.7 | 0.0 | 0.12 | 0.57 | 0.86 | 3.50 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.540 | 3.95 | 2.19 | 4.6 | 95.2 | 0.1 | 1.16 | 0.39 | 0.58 | 0.88 | 3.79 | 7472 | 933 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9CHS | 45600 | 2024-10-14 | 2024-07-01 | 3.4 | 3.17 | 3.29 | 3.3 | 0.013 | 1.70 | 0.0 | 0.09 | 11.67 | 0.02 | 2.560 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -0.93 | 0.52 | 0.79 | 3.56 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 14.62 | 0.00 | 2.362 | 2.99 | 1.37 | 2.9 | 97.1 | 0.0 | 2.62 | 1.73 | 0.50 | 0.79 | 2.42 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHR | 45599 | 2024-10-14 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.403 | 2.99 | 0.98 | 4.8 | 95.2 | 0.0 | 2.04 | 0.90 | 0.51 | 0.77 | 2.67 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGZ | 45589 | 2024-10-10 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2024-11-14 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CHS | 45600 | 2024-11-19 | 2024-07-01 | 3.4 | 3.17 | 3.29 | 3.3 | 0.013 | 1.70 | 0.0 | 0.09 | 11.67 | 0.02 | 2.560 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -0.93 | 0.52 | 0.79 | 3.56 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 14.62 | 0.00 | 2.362 | 2.99 | 1.37 | 2.9 | 97.1 | 0.0 | 2.62 | 1.73 | 0.50 | 0.79 | 2.42 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHR | 45599 | 2024-11-19 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.403 | 2.99 | 0.98 | 4.8 | 95.2 | 0.0 | 2.04 | 0.90 | 0.51 | 0.77 | 2.67 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGZ | 45589 | 2024-09-24 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CHR | 45599 | 2024-09-28 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.403 | 2.99 | 0.98 | 4.8 | 95.2 | 0.0 | 2.04 | 0.90 | 0.51 | 0.77 | 2.67 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHQ | 45598 | 2024-10-14 | 2024-07-01 | 3.0 | 2.94 | 3.01 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 15.94 | 0.01 | 2.424 | 2.04 | 0.59 | 2.8 | 97.2 | 0.0 | 2.33 | 1.72 | 0.48 | 0.77 | 3.22 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✘ | 9CHQ | 45598 | 2024-11-19 | 2024-07-01 | 3.0 | 2.94 | 3.01 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHP | 45597 | 2024-10-14 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 15.49 | 0.00 | 2.433 | 1.73 | 1.18 | 4.9 | 95.1 | 0.0 | 2.07 | 1.28 | 0.52 | 0.78 | 2.96 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHP | 45597 | 2024-11-19 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 15.49 | 0.00 | 2.433 | 1.73 | 1.18 | 4.9 | 95.1 | 0.0 | 2.07 | 1.28 | 0.52 | 0.78 | 2.96 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |