Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9MX3	48708	2025-05-10	2025-01-17	3.0	3.93	3.03	3.5	0.003	0.63	0.0	0.04	17.07	0.00	2.208	6.38	1.68	3.8	96.2	0.0	1.64	0.86	0.83	1.60	3.5	0.002	0.62	0.0	0.04	17.28	0.00	2.225	4.83	2.52	3.6	96.4	0.0	2.10	0.34	0.86	0.83	1.36	5929	641	4	33	1	0	0	logfile
✔	9MX3	48708	2025-06-05	2025-01-17	3.0	3.93	3.03	3.5	0.003	0.63	0.0	0.04	17.07	0.00	2.208	6.38	1.68	3.8	96.2	0.0	1.64	0.86	0.83	1.60	3.5	0.002	0.60	0.0	0.04	17.24	0.00	2.242	5.00	2.52	3.9	96.1	0.0	2.14	0.33	0.86	0.82	1.24	5929	641	4	33	1	0	0	logfile
✔	9LLD	63198	2025-06-14	2025-01-17	3.6	4.83	3.56	3.6	0.003	0.56	0.0	0.04	14.89	0.00	2.221	8.69	0.07	6.3	93.7	0.0	-0.60	0.86	0.61	1.72	3.7	0.003	0.57	0.0	0.04	15.04	0.00	2.585	6.21	3.07	6.9	93.0	0.0	-1.10	1.82	0.89	0.88	2.00	16287	2334	9	0	0	0	0	logfile
✔	9LKY	63188	2025-06-27	2025-01-17	3.93	4.25	4.04	4.1	0.004	0.60	0.0	0.04	15.03	0.00	1.998	7.88	0.00	5.6	94.4	0.0	-0.51	0.79	0.80	1.15	4.1	0.003	0.70	0.0	0.04	16.85	0.00	1.960	12.86	2.31	5.3	94.7	0.0	0.70	0.80	0.80	0.83	1.35	26308	3277	13	0	6	0	0	logfile
✔	9MX3	48708	2025-04-27	2025-01-17	3.0	3.93	3.03	3.5	0.003	0.63	0.0	0.04	17.07	0.00	2.208	6.38	1.68	3.8	96.2	0.0	1.64	0.86	0.83	1.60	3.5	0.002	0.60	0.0	0.04	17.24	0.00	2.242	5.00	2.52	3.9	96.1	0.0	2.14	0.33	0.86	0.82	1.24	5929	641	4	33	1	0	0	logfile
✔	9MX5	48710	2025-07-24	2025-01-17	3.1	3.96	3.22	3.7	0.003	0.56	0.0	0.04	18.21	0.00	2.169	8.83	1.32	4.2	95.7	0.2	2.06	0.84	0.85	1.94	3.7	0.005	0.72	0.0	0.04	18.22	0.00	2.396	7.95	1.49	4.9	94.9	0.2	1.74	0.99	0.84	0.86	1.68	6463	652	4	54	3	0	0	logfile
✔	9MX5	48710	2025-06-05	2025-01-17	3.1	3.96	3.22	3.7	0.003	0.56	0.0	0.04	18.21	0.00	2.169	8.83	1.32	4.2	95.7	0.2	2.06	0.84	0.85	1.94	3.7	0.005	0.72	0.0	0.04	18.22	0.00	2.396	7.95	1.49	4.9	94.9	0.2	1.74	0.99	0.84	0.86	1.68	6463	652	4	54	3	0	0	logfile
✘	9MX5	48710	2025-05-10	2025-01-17	3.1	3.96	3.22	3.7	0.003	0.56	0.0	0.04	18.21	0.00	2.169	8.83	1.32	4.2	95.7	0.2	2.06	0.84	0.85	1.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6463	652	4	54	3	0	0	logfile
✔	9MX5	48710	2025-04-27	2025-01-17	3.1	3.96	3.22	3.7	0.003	0.56	0.0	0.04	18.21	0.00	2.169	8.83	1.32	4.2	95.7	0.2	2.06	0.84	0.85	1.94	3.7	0.005	0.72	0.0	0.04	18.22	0.00	2.396	7.95	1.49	4.9	94.9	0.2	1.74	0.99	0.84	0.86	1.68	6463	652	4	54	3	0	0	logfile
✔	9MW8	48697	2025-07-24	2025-01-17	3.3	4.53	3.31	4.0	0.002	0.63	0.0	0.04	18.27	0.00	2.077	13.98	1.33	3.3	96.6	0.2	1.50	0.85	0.75	0.46	4.0	0.002	0.64	0.0	0.04	18.43	0.00	2.491	9.78	1.83	2.8	96.9	0.3	1.69	1.30	0.85	0.76	0.43	6419	647	4	54	2	0	0	logfile
✔	9MW8	48697	2025-06-05	2025-01-17	3.3	4.53	3.31	4.0	0.002	0.63	0.0	0.04	18.27	0.00	2.077	13.98	1.33	3.3	96.6	0.2	1.50	0.85	0.75	0.46	4.0	0.002	0.64	0.0	0.04	18.43	0.00	2.491	9.78	1.83	2.8	96.9	0.3	1.69	1.30	0.85	0.76	0.43	6419	647	4	54	2	0	0	logfile
✔	9MW8	48697	2025-04-27	2025-01-17	3.3	4.53	3.31	4.0	0.002	0.63	0.0	0.04	18.27	0.00	2.077	13.98	1.33	3.3	96.6	0.2	1.50	0.85	0.75	0.46	4.0	0.002	0.64	0.0	0.04	18.43	0.00	2.491	9.78	1.83	2.8	96.9	0.3	1.69	1.30	0.85	0.76	0.43	6419	647	4	54	2	0	0	logfile
✔	9MW8	48697	2025-05-10	2025-01-17	3.3	4.53	3.31	4.0	0.002	0.63	0.0	0.04	18.27	0.00	2.077	13.98	1.33	3.3	96.6	0.2	1.50	0.85	0.75	0.46	4.0	0.003	0.69	0.0	0.04	18.46	0.00	2.479	12.93	2.17	3.4	96.3	0.3	1.47	0.96	0.86	0.77	-0.06	6419	647	4	54	2	0	0	logfile
✔	9MW6	48678	2025-05-10	2025-01-16	3.4	4.48	3.46	4.2	0.004	0.62	0.0	0.04	17.58	0.00	2.098	12.23	2.43	6.4	93.6	0.0	-0.15	0.78	0.78	1.20	4.1	0.002	0.62	0.0	0.04	17.84	0.00	2.554	8.22	2.03	6.2	93.8	0.0	0.12	0.94	0.78	0.78	1.35	5473	535	3	54	0	0	0	logfile
✔	9MW6	48678	2025-06-05	2025-01-16	3.4	4.48	3.46	4.2	0.004	0.62	0.0	0.04	17.58	0.00	2.098	12.23	2.43	6.4	93.6	0.0	-0.15	0.78	0.78	1.20	4.1	0.002	0.63	0.0	0.04	17.85	0.00	2.568	8.70	1.83	6.8	93.2	0.0	0.05	0.93	0.78	0.78	1.28	5473	535	3	54	0	0	0	logfile
✔	9MW6	48678	2025-07-24	2025-01-16	3.4	4.48	3.46	4.2	0.004	0.62	0.0	0.04	17.58	0.00	2.098	12.23	2.43	6.4	93.6	0.0	-0.15	0.78	0.78	1.20	4.1	0.002	0.63	0.0	0.04	17.85	0.00	2.568	8.70	1.83	6.8	93.2	0.0	0.05	0.93	0.78	0.78	1.28	5473	535	3	54	0	0	0	logfile
✔	9MW6	48678	2025-04-27	2025-01-16	3.4	4.48	3.46	4.2	0.004	0.62	0.0	0.04	17.58	0.00	2.098	12.23	2.43	6.4	93.6	0.0	-0.15	0.78	0.78	1.20	4.1	0.002	0.63	0.0	0.04	17.85	0.00	2.568	8.70	1.83	6.8	93.2	0.0	0.05	0.93	0.78	0.78	1.28	5473	535	3	54	0	0	0	logfile
✔	9MW7	48691	2025-04-27	2025-01-16	3.4	4.43	3.48	3.9	0.008	0.62	0.0	0.04	18.41	0.00	2.138	15.61	1.01	9.2	90.6	0.2	-1.07	0.83	0.66	0.86	3.9	0.003	0.66	0.0	0.04	18.77	0.00	1.895	13.33	1.22	9.2	90.4	0.4	-1.39	1.00	0.84	0.67	1.05	5504	535	4	54	2	0	0	logfile
✔	9MW7	48691	2025-05-10	2025-01-16	3.4	4.43	3.48	3.9	0.008	0.62	0.0	0.04	18.41	0.00	2.138	15.61	1.01	9.2	90.6	0.2	-1.07	0.83	0.66	0.86	3.9	0.003	0.68	0.0	0.04	18.74	0.00	2.058	16.94	1.83	10.5	89.1	0.4	-1.53	0.98	0.84	0.68	0.90	5504	535	4	54	2	0	0	logfile
✔	9MW7	48691	2025-06-05	2025-01-16	3.4	4.43	3.48	3.9	0.008	0.62	0.0	0.04	18.41	0.00	2.138	15.61	1.01	9.2	90.6	0.2	-1.07	0.83	0.66	0.86	3.9	0.003	0.66	0.0	0.04	18.77	0.00	1.895	13.33	1.22	9.2	90.4	0.4	-1.39	1.00	0.84	0.67	1.05	5504	535	4	54	2	0	0	logfile

• ← previous
• Page 14 of 5055
• next →