Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9DBQ	46724	2025-02-14	2024-08-23	2.9	3.52	2.91	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.63	0.0	0.04	14.92	0.00	2.424	7.90	1.90	3.1	96.9	0.0	2.04	1.40	0.68	0.74	1.37	10062	1182	4	0	20	0	0	logfile
✔	9DBQ	46724	2024-12-29	2024-08-23	2.9	3.52	2.91	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.64	0.0	0.04	14.95	0.00	2.417	8.04	2.40	2.9	97.1	0.0	1.97	1.40	0.68	0.74	1.35	10062	1182	4	0	20	0	0	logfile
✔	9DBQ	46724	2025-01-16	2024-08-23	2.9	3.52	2.91	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.63	0.0	0.04	14.92	0.00	2.424	7.90	1.90	3.1	96.9	0.0	2.04	1.40	0.68	0.74	1.37	10062	1182	4	0	20	0	0	logfile
✔	9JA0	61286	2024-09-28	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.53	0.0	0.04	14.29	0.00	2.643	4.79	1.10	4.6	95.4	0.0	0.91	0.94	0.72	0.85	2.72	19716	2628	12	0	0	0	0	logfile
✘	9JA0	61286	2024-10-15	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19716	2628	12	0	0	0	0	logfile
✔	9JA0	61286	2025-01-23	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.52	0.0	0.04	14.28	0.00	2.638	4.40	0.80	4.3	95.7	0.0	1.01	0.94	0.72	0.85	2.67	19716	2628	12	0	0	0	0	logfile
✔	9JA0	61286	2024-11-19	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.53	0.0	0.04	14.29	0.00	2.643	4.79	1.10	4.6	95.4	0.0	0.91	0.94	0.72	0.85	2.72	19716	2628	12	0	0	0	0	logfile
✔	9DAK	46691	2025-03-12	2024-08-22	2.4	2.74	2.43	2.6	0.011	1.22	0.0	0.09	13.17	0.00	1.935	1.68	0.47	1.5	98.5	0.0	0.51	0.78	0.84	4.93	2.6	0.003	0.64	0.0	0.04	14.22	0.00	2.278	2.78	0.94	1.0	99.0	0.0	2.01	0.47	0.71	0.83	4.09	7303	899	13	0	23	144	0	logfile
✔	9D9L	46676	2025-01-15	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.59	1.0	0.04	15.49	0.00	2.211	4.14	1.67	4.3	95.7	0.0	-1.55	1.71	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9D9L	46676	2024-12-27	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.58	1.0	0.04	15.37	0.00	2.211	3.74	2.12	4.1	95.9	0.0	-1.44	1.70	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9D9L	46676	2024-10-10	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.58	1.0	0.04	15.37	0.00	2.211	3.74	2.12	4.1	95.9	0.0	-1.44	1.70	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9D9L	46676	2024-11-18	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.58	1.0	0.04	15.37	0.00	2.211	3.74	2.12	4.1	95.9	0.0	-1.44	1.70	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9J8P	61237	2025-03-11	2024-08-21	3.21	3.65	—	1.5	0.006	0.90	0.0	0.05	20.97	0.01	2.235	10.53	0.00	5.4	94.6	0.0	-0.46	0.92	0.83	1.79	1.5	0.004	0.71	0.0	0.04	21.60	0.00	2.340	12.60	1.35	3.9	96.1	0.0	0.22	2.59	0.93	0.86	1.50	7061	623	3	106	1	0	0	logfile
✔	9J8P	61237	2025-01-14	2024-08-21	3.21	3.65	—	1.5	0.006	0.90	0.0	0.05	20.97	0.01	2.235	10.53	0.00	5.4	94.6	0.0	-0.46	0.92	0.83	1.79	1.5	0.003	0.69	0.0	0.04	21.55	0.00	2.366	11.76	1.55	3.3	96.7	0.0	0.54	2.59	0.93	0.86	1.34	7061	623	3	106	1	0	0	logfile
✔	9J8P	61237	2025-02-11	2024-08-21	3.21	3.65	—	1.5	0.006	0.90	0.0	0.05	20.97	0.01	2.235	10.53	0.00	5.4	94.6	0.0	-0.46	0.92	0.83	1.79	1.5	0.003	0.69	0.0	0.04	21.55	0.00	2.366	11.76	1.55	3.3	96.7	0.0	0.54	2.59	0.93	0.86	1.34	7061	623	3	106	1	0	0	logfile
✔	9D8P	46645	2025-02-11	2024-08-19	3.2	3.70	3.13	3.5	0.003	0.48	0.0	0.04	15.51	0.00	2.213	9.78	0.00	2.1	97.9	0.0	0.36	0.80	0.84	3.38	3.5	0.003	0.51	0.0	0.04	15.76	0.00	2.506	5.89	3.63	2.1	97.9	0.0	0.19	0.18	0.79	0.84	3.24	4073	537	4	0	0	0	0	logfile
✔	9D8P	46645	2025-01-13	2024-08-19	3.2	3.70	3.13	3.5	0.003	0.48	0.0	0.04	15.51	0.00	2.213	9.78	0.00	2.1	97.9	0.0	0.36	0.80	0.84	3.38	3.5	0.003	0.51	0.0	0.04	15.76	0.00	2.506	5.89	3.63	2.1	97.9	0.0	0.19	0.18	0.79	0.84	3.24	4073	537	4	0	0	0	0	logfile
✔	9D8P	46645	2024-12-27	2024-08-19	3.2	3.70	3.13	3.5	0.003	0.48	0.0	0.04	15.51	0.00	2.213	9.78	0.00	2.1	97.9	0.0	0.36	0.80	0.84	3.38	3.5	0.003	0.53	0.0	0.04	15.74	0.00	2.494	6.27	3.15	2.3	97.7	0.0	0.15	0.18	0.80	0.85	3.21	4073	537	4	0	0	0	0	logfile
✔	9D8P	46645	2025-03-05	2024-08-19	3.2	3.70	3.12	3.5	0.003	0.48	0.0	0.04	15.51	0.00	2.213	9.78	0.00	2.1	97.9	0.0	0.36	0.80	0.84	3.38	3.5	0.004	0.55	0.0	0.04	15.75	0.00	2.484	6.39	2.91	2.9	97.1	0.0	0.09	0.20	0.80	0.85	3.24	4073	537	4	0	0	0	0	logfile
✔	9J7V	61211	2025-02-10	2024-08-19	3.3	3.54	3.36	3.6	0.007	0.97	0.0	0.04	16.85	0.00	2.210	2.17	0.00	4.6	95.4	0.0	1.94	0.60	0.84	1.45	3.6	0.003	0.47	0.0	0.04	15.98	0.00	2.635	2.51	0.65	2.6	97.4	0.0	2.16	0.25	0.58	0.84	1.69	2975	352	2	0	8	0	0	logfile

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