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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9MW7 | 48691 | 2025-05-10 | 2025-01-16 | 3.4 | 4.43 | 3.48 | 3.9 | 0.008 | 0.62 | 0.0 | 0.04 | 18.41 | 0.00 | 2.138 | 15.61 | 1.01 | 9.2 | 90.6 | 0.2 | -1.07 | 0.83 | 0.66 | 0.86 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 18.74 | 0.00 | 2.058 | 16.94 | 1.83 | 10.5 | 89.1 | 0.4 | -1.53 | 0.98 | 0.84 | 0.68 | 0.90 | 5504 | 535 | 4 | 54 | 2 | 0 | 0 | logfile |
✔ | 9MW6 | 48678 | 2025-07-24 | 2025-01-16 | 3.4 | 4.48 | 3.46 | 4.2 | 0.004 | 0.62 | 0.0 | 0.04 | 17.58 | 0.00 | 2.098 | 12.23 | 2.43 | 6.4 | 93.6 | 0.0 | -0.15 | 0.78 | 0.78 | 1.20 | 4.1 | 0.002 | 0.63 | 0.0 | 0.04 | 17.85 | 0.00 | 2.568 | 8.70 | 1.83 | 6.8 | 93.2 | 0.0 | 0.05 | 0.93 | 0.78 | 0.78 | 1.28 | 5473 | 535 | 3 | 54 | 0 | 0 | 0 | logfile |
✔ | 9MW6 | 48678 | 2025-06-05 | 2025-01-16 | 3.4 | 4.48 | 3.46 | 4.2 | 0.004 | 0.62 | 0.0 | 0.04 | 17.58 | 0.00 | 2.098 | 12.23 | 2.43 | 6.4 | 93.6 | 0.0 | -0.15 | 0.78 | 0.78 | 1.20 | 4.1 | 0.002 | 0.63 | 0.0 | 0.04 | 17.85 | 0.00 | 2.568 | 8.70 | 1.83 | 6.8 | 93.2 | 0.0 | 0.05 | 0.93 | 0.78 | 0.78 | 1.28 | 5473 | 535 | 3 | 54 | 0 | 0 | 0 | logfile |
✔ | 9MW6 | 48678 | 2025-05-10 | 2025-01-16 | 3.4 | 4.48 | 3.46 | 4.2 | 0.004 | 0.62 | 0.0 | 0.04 | 17.58 | 0.00 | 2.098 | 12.23 | 2.43 | 6.4 | 93.6 | 0.0 | -0.15 | 0.78 | 0.78 | 1.20 | 4.1 | 0.002 | 0.62 | 0.0 | 0.04 | 17.84 | 0.00 | 2.554 | 8.22 | 2.03 | 6.2 | 93.8 | 0.0 | 0.12 | 0.94 | 0.78 | 0.78 | 1.35 | 5473 | 535 | 3 | 54 | 0 | 0 | 0 | logfile |
✔ | 9MW6 | 48678 | 2025-04-27 | 2025-01-16 | 3.4 | 4.48 | 3.46 | 4.2 | 0.004 | 0.62 | 0.0 | 0.04 | 17.58 | 0.00 | 2.098 | 12.23 | 2.43 | 6.4 | 93.6 | 0.0 | -0.15 | 0.78 | 0.78 | 1.20 | 4.1 | 0.002 | 0.63 | 0.0 | 0.04 | 17.85 | 0.00 | 2.568 | 8.70 | 1.83 | 6.8 | 93.2 | 0.0 | 0.05 | 0.93 | 0.78 | 0.78 | 1.28 | 5473 | 535 | 3 | 54 | 0 | 0 | 0 | logfile |
✔ | 9LiU | 63123 | 2025-06-17 | 2025-01-14 | 2.7 | 3.43 | 3.04 | 3.2 | 0.014 | 0.89 | 0.0 | 0.05 | 24.81 | 0.01 | 2.011 | 14.07 | 3.71 | 6.0 | 94.0 | 0.0 | -0.19 | 0.88 | 0.85 | 2.85 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 24.59 | 0.00 | 1.938 | 8.09 | 1.92 | 4.4 | 95.6 | 0.0 | 1.19 | 1.18 | 0.86 | 0.83 | 1.91 | 19587 | 1678 | 14 | 292 | 4 | 0 | 0 | logfile |
✔ | 9LiU | 63123 | 2025-05-20 | 2025-01-14 | 2.7 | 3.43 | 3.04 | 3.2 | 0.014 | 0.89 | 0.0 | 0.05 | 24.81 | 0.01 | 2.011 | 14.07 | 3.71 | 6.0 | 94.0 | 0.0 | -0.19 | 0.88 | 0.85 | 2.85 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 24.64 | 0.00 | 1.934 | 8.15 | 2.13 | 4.7 | 95.3 | 0.0 | 1.10 | 1.17 | 0.86 | 0.83 | 1.95 | 19587 | 1678 | 14 | 292 | 4 | 0 | 0 | logfile |
✔ | 9LJ2 | 63131 | 2025-05-21 | 2025-01-14 | 2.98 | 3.63 | 3.05 | 3.3 | 0.005 | 0.73 | 0.0 | 0.04 | 24.54 | 0.00 | 2.044 | 15.37 | 0.18 | 8.0 | 92.0 | 0.0 | -0.69 | 0.87 | 0.84 | 1.94 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 25.12 | 0.00 | 2.044 | 11.76 | 1.97 | 6.6 | 93.4 | 0.0 | 0.29 | 0.44 | 0.87 | 0.85 | 1.23 | 21131 | 1861 | 14 | 294 | 4 | 0 | 0 | logfile |
✔ | 9MUo | 48639 | 2025-06-07 | 2025-01-14 | 3.3 | 3.88 | 3.31 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 17.64 | 0.01 | 2.216 | 14.39 | 1.45 | 5.3 | 94.3 | 0.4 | -0.28 | 0.61 | 0.85 | 1.70 | 3.7 | 0.003 | 0.71 | 0.0 | 0.05 | 17.56 | 0.00 | 2.453 | 13.13 | 3.90 | 4.6 | 95.4 | 0.0 | 0.49 | 1.04 | 0.61 | 0.87 | 2.13 | 8410 | 1012 | 7 | 8 | 1 | 0 | 0 | logfile |
✔ | 9MUo | 48639 | 2025-07-26 | 2025-01-14 | 3.3 | 3.88 | 3.31 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 17.64 | 0.01 | 2.216 | 14.39 | 1.45 | 5.3 | 94.3 | 0.4 | -0.28 | 0.61 | 0.85 | 1.70 | 3.7 | 0.003 | 0.71 | 0.0 | 0.05 | 17.56 | 0.00 | 2.453 | 13.13 | 3.90 | 4.6 | 95.4 | 0.0 | 0.49 | 1.04 | 0.61 | 0.87 | 2.13 | 8410 | 1012 | 7 | 8 | 1 | 0 | 0 | logfile |
✔ | 9LJ2 | 63131 | 2025-06-18 | 2025-01-14 | 2.98 | 3.63 | 3.05 | 3.3 | 0.005 | 0.73 | 0.0 | 0.04 | 24.54 | 0.00 | 2.044 | 15.37 | 0.18 | 8.0 | 92.0 | 0.0 | -0.69 | 0.87 | 0.84 | 1.94 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 25.09 | 0.00 | 2.050 | 11.83 | 1.35 | 6.6 | 93.4 | 0.0 | 0.32 | 0.45 | 0.87 | 0.85 | 1.14 | 21131 | 1861 | 14 | 294 | 4 | 0 | 0 | logfile |
✔ | 9MUo | 48639 | 2025-04-29 | 2025-01-14 | 3.3 | 3.88 | 3.31 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 17.64 | 0.01 | 2.216 | 14.39 | 1.45 | 5.3 | 94.3 | 0.4 | -0.28 | 0.61 | 0.85 | 1.70 | 3.7 | 0.003 | 0.71 | 0.0 | 0.05 | 17.56 | 0.00 | 2.453 | 13.13 | 3.90 | 4.6 | 95.4 | 0.0 | 0.49 | 1.04 | 0.61 | 0.87 | 2.13 | 8410 | 1012 | 7 | 8 | 1 | 0 | 0 | logfile |
✔ | 9MUo | 48639 | 2025-05-11 | 2025-01-14 | 3.3 | 3.88 | 3.31 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 17.64 | 0.01 | 2.216 | 14.39 | 1.45 | 5.3 | 94.3 | 0.4 | -0.28 | 0.61 | 0.85 | 1.70 | 3.7 | 0.003 | 0.70 | 0.0 | 0.05 | 17.71 | 0.00 | 2.407 | 13.61 | 3.79 | 4.7 | 95.3 | 0.0 | 0.44 | 1.04 | 0.62 | 0.87 | 2.01 | 8410 | 1012 | 7 | 8 | 1 | 0 | 0 | logfile |
✔ | 9MU4 | 48619 | 2025-07-30 | 2025-01-13 | 3.29 | 3.84 | 3.34 | 3.5 | 0.006 | 0.84 | 0.0 | 0.05 | 28.80 | 0.01 | 2.302 | 2.50 | 0.00 | 3.7 | 96.3 | 0.0 | -1.86 | 0.90 | 0.86 | 2.88 | 3.5 | 0.004 | 0.61 | 0.0 | 0.03 | 29.06 | 0.00 | 2.290 | 8.71 | 1.91 | 4.6 | 95.4 | 0.0 | 2.04 | 1.22 | 0.91 | 0.88 | 2.04 | 12794 | 770 | 10 | 328 | 0 | 0 | 0 | logfile |
✔ | 9MU3 | 48618 | 2025-05-26 | 2025-01-13 | 3.14 | 3.36 | 3.22 | 3.3 | 0.006 | 0.99 | 0.0 | 0.06 | 13.62 | 0.01 | 2.412 | 0.07 | 0.00 | 3.1 | 96.9 | 0.0 | -0.46 | 0.76 | 0.87 | 3.70 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 17.43 | 0.00 | 2.523 | 4.62 | 3.01 | 1.3 | 98.7 | 0.0 | 0.67 | 1.50 | 0.75 | 0.87 | 3.25 | 28932 | 3558 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 9MU3 | 48618 | 2025-06-24 | 2025-01-13 | 3.14 | 3.36 | 3.22 | 3.3 | 0.006 | 0.99 | 0.0 | 0.06 | 13.62 | 0.01 | 2.412 | 0.07 | 0.00 | 3.1 | 96.9 | 0.0 | -0.46 | 0.76 | 0.87 | 3.70 | 3.3 | 0.002 | 0.56 | 0.0 | 0.04 | 17.32 | 0.00 | 2.522 | 4.46 | 3.30 | 1.4 | 98.6 | 0.0 | 0.73 | 1.50 | 0.74 | 0.87 | 3.23 | 28932 | 3558 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 9MU4 | 48619 | 2025-06-11 | 2025-01-13 | 3.29 | 3.84 | 3.34 | 3.5 | 0.006 | 0.84 | 0.0 | 0.05 | 28.80 | 0.01 | 2.302 | 2.50 | 0.00 | 3.7 | 96.3 | 0.0 | -1.86 | 0.90 | 0.86 | 2.88 | 3.5 | 0.004 | 0.61 | 0.0 | 0.03 | 29.06 | 0.00 | 2.290 | 8.71 | 1.91 | 4.6 | 95.4 | 0.0 | 2.04 | 1.22 | 0.91 | 0.88 | 2.04 | 12794 | 770 | 10 | 328 | 0 | 0 | 0 | logfile |
✔ | 9MU4 | 48619 | 2025-05-15 | 2025-01-13 | 3.29 | 3.84 | 3.34 | 3.5 | 0.006 | 0.84 | 0.0 | 0.05 | 28.80 | 0.01 | 2.302 | 2.50 | 0.00 | 3.7 | 96.3 | 0.0 | -1.86 | 0.90 | 0.86 | 2.88 | 3.5 | 0.004 | 0.61 | 0.0 | 0.03 | 29.07 | 0.00 | 2.463 | 8.41 | 2.23 | 4.4 | 95.6 | 0.0 | 2.25 | 1.22 | 0.91 | 0.88 | 2.08 | 12794 | 770 | 10 | 328 | 0 | 0 | 0 | logfile |
✔ | 9HZE | 52523 | 2025-05-17 | 2025-01-13 | 3.23 | 4.07 | 3.26 | 3.7 | 0.002 | 0.42 | 0.0 | 0.04 | 12.45 | 0.00 | 2.430 | 5.07 | 0.00 | 3.2 | 96.8 | 0.0 | 0.52 | 0.81 | 0.82 | 3.79 | 3.7 | 0.004 | 0.50 | 0.0 | 0.05 | 12.31 | 0.00 | 2.548 | 3.42 | 0.89 | 0.0 | 100.0 | 0.0 | 1.88 | 0.44 | 0.91 | 0.92 | 4.57 | 16152 | 2280 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 9HZE | 52523 | 2025-06-14 | 2025-01-13 | 3.23 | 4.07 | 3.26 | 3.7 | 0.002 | 0.42 | 0.0 | 0.04 | 12.45 | 0.00 | 2.430 | 5.07 | 0.00 | 3.2 | 96.8 | 0.0 | 0.52 | 0.81 | 0.82 | 3.79 | 3.7 | 0.002 | 0.48 | 0.0 | 0.04 | 12.14 | 0.00 | 2.553 | 3.39 | 0.48 | 0.0 | 100.0 | 0.0 | 1.68 | 0.45 | 0.91 | 0.92 | 4.42 | 16152 | 2280 | 24 | 0 | 0 | 0 | 0 | logfile |