Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BHB	44539	2025-01-13	2024-04-19	3.1	3.25	2.99	3.3	0.006	0.81	0.0	0.05	13.80	0.01	2.274	5.99	0.35	6.6	93.4	0.0	-2.11	0.60	0.83	4.31	3.3	0.004	0.59	0.0	0.04	15.08	0.00	2.533	7.72	3.52	5.1	94.9	0.0	0.51	0.81	0.59	0.84	3.98	2626	328	3	0	0	0	0	logfile
✔	8Z74	39810	2025-03-11	2024-04-19	3.01	2.28	3.02	2.1	0.003	0.63	0.0	0.04	14.94	0.00	2.235	13.45	0.00	3.9	96.1	0.0	0.52	0.73	0.74	2.84	2.1	0.003	0.65	0.0	0.04	15.21	0.00	2.513	10.48	2.64	3.3	96.7	0.0	0.46	0.28	0.73	0.75	2.86	6709	847	5	0	2	0	0	logfile
✔	9BH0	44528	2025-04-26	2024-04-19	3.4	2.55	3.39	3.3	0.003	0.57	0.0	0.04	14.29	0.00	2.071	4.94	0.32	2.1	97.9	0.0	2.89	0.74	0.83	2.29	3.3	0.005	0.69	0.0	0.04	16.47	0.00	2.591	6.09	3.48	1.0	99.0	0.0	2.75	0.54	0.79	0.86	1.88	2934	391	2	0	0	0	0	logfile
✔	8Z74	39810	2025-02-11	2024-04-19	3.01	2.28	3.02	2.1	0.003	0.63	0.0	0.04	14.94	0.00	2.235	13.45	0.00	3.9	96.1	0.0	0.52	0.73	0.74	2.84	2.1	0.003	0.64	0.0	0.04	15.17	0.00	2.558	10.41	2.78	3.2	96.8	0.0	0.52	0.27	0.71	0.73	2.95	6709	847	5	0	2	0	0	logfile
✔	8Z6X	39807	2025-03-06	2024-04-19	2.96	3.13	2.88	1.8	0.003	0.54	0.0	0.05	9.21	0.00	2.186	4.00	3.07	7.2	92.6	0.2	-2.58	0.75	0.88	4.17	1.8	0.003	0.71	0.0	0.05	13.83	0.00	2.488	5.94	3.26	7.2	92.8	0.0	-0.54	1.32	0.76	0.92	3.70	4704	618	3	0	0	0	0	logfile
✔	8Z6X	39807	2025-02-11	2024-04-19	2.96	3.13	2.88	1.8	0.003	0.54	0.0	0.05	9.21	0.00	2.186	4.00	3.07	7.2	92.6	0.2	-2.58	0.75	0.88	4.17	1.8	0.004	0.76	0.0	0.05	13.74	0.01	2.473	6.05	3.65	7.7	92.3	0.0	-0.66	1.78	0.76	0.92	3.65	4704	618	3	0	0	0	0	logfile
✔	9BGY	44526	2025-04-26	2024-04-19	3.0	2.40	3.00	3.0	0.003	0.50	0.0	0.04	14.21	0.00	2.152	6.28	0.32	2.1	97.9	0.0	2.93	0.71	0.83	2.27	3.0	0.004	0.66	0.0	0.04	16.45	0.00	2.590	7.44	2.55	2.1	97.9	0.0	2.78	0.50	0.77	0.86	3.14	2916	389	1	0	0	0	0	logfile
✔	8Z74	39810	2025-04-28	2024-04-19	3.01	2.28	3.02	2.1	0.003	0.63	0.0	0.04	14.94	0.00	2.235	13.45	0.00	3.9	96.1	0.0	0.52	0.73	0.74	2.84	2.1	0.004	0.65	0.0	0.04	15.20	0.00	2.539	10.78	2.78	3.3	96.7	0.0	0.42	0.29	0.72	0.73	2.91	6709	847	5	0	2	0	0	logfile
✔	8Z6X	39807	2025-04-27	2024-04-19	2.96	3.13	2.88	1.8	0.003	0.54	0.0	0.05	9.21	0.00	2.186	4.00	3.07	7.2	92.6	0.2	-2.58	0.75	0.88	4.17	1.8	0.005	0.76	0.0	0.05	13.92	0.01	2.474	5.73	3.84	7.8	92.2	0.0	-0.74	1.78	0.76	0.92	3.64	4704	618	3	0	0	0	0	logfile
✔	9BH9	44537	2024-08-05	2024-04-19	3.5	3.53	3.42	3.5	0.003	0.68	0.0	0.05	15.03	0.01	2.362	1.75	0.07	0.6	99.4	0.0	-2.11	0.72	0.76	2.80	3.5	0.003	0.66	0.0	0.04	17.76	0.00	2.524	6.81	1.47	1.9	98.1	0.0	0.87	2.06	0.74	0.76	1.60	13155	1574	4	50	0	0	0	logfile
✔	9BH9	44537	2024-10-12	2024-04-19	3.5	3.53	3.42	3.5	0.003	0.68	0.0	0.05	15.03	0.01	2.362	1.75	0.07	0.6	99.4	0.0	-2.11	0.72	0.76	2.80	3.5	0.003	0.66	0.0	0.04	17.76	0.00	2.524	6.81	1.47	1.9	98.1	0.0	0.87	2.06	0.74	0.76	1.60	13155	1574	4	50	0	0	0	logfile
✔	9BH9	44537	2024-11-17	2024-04-19	3.5	3.53	3.42	3.5	0.003	0.68	0.0	0.05	15.03	0.01	2.362	1.75	0.07	0.6	99.4	0.0	-2.11	0.72	0.76	2.80	3.5	0.003	0.66	0.0	0.04	17.76	0.00	2.524	6.81	1.47	1.9	98.1	0.0	0.87	2.06	0.74	0.76	1.60	13155	1574	4	50	0	0	0	logfile
✔	9BH9	44537	2024-12-30	2024-04-19	3.5	3.53	3.42	3.5	0.003	0.68	0.0	0.05	15.03	0.01	2.362	1.75	0.07	0.6	99.4	0.0	-2.11	0.72	0.76	2.80	3.5	0.003	0.66	0.0	0.04	17.76	0.00	2.524	6.81	1.47	1.9	98.1	0.0	0.87	2.06	0.74	0.76	1.60	13155	1574	4	50	0	0	0	logfile
✔	9BH7	44535	2024-12-30	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.60	0.0	0.04	16.09	0.00	2.534	6.56	2.32	2.0	98.0	0.0	1.96	2.04	0.83	0.79	1.12	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2024-11-16	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.60	0.0	0.04	16.09	0.00	2.534	6.56	2.32	2.0	98.0	0.0	1.96	2.04	0.83	0.79	1.12	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2024-10-12	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.60	0.0	0.04	16.09	0.00	2.534	6.56	2.32	2.0	98.0	0.0	1.96	2.04	0.83	0.79	1.12	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2024-09-26	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.60	0.0	0.04	16.09	0.00	2.534	6.56	2.32	2.0	98.0	0.0	1.96	2.04	0.83	0.79	1.12	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2024-08-05	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.60	0.0	0.04	16.09	0.00	2.534	6.56	2.32	2.0	98.0	0.0	1.96	2.04	0.83	0.79	1.12	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2024-07-20	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.59	0.0	0.04	15.81	0.00	2.192	7.98	2.32	2.1	97.9	0.0	2.05	2.05	0.83	0.78	0.89	12166	1544	2	0	0	0	0	logfile
✔	9BH7	44535	2025-01-18	2024-04-19	3.5	3.43	3.54	3.6	0.003	0.64	0.0	0.04	12.66	0.01	2.370	1.58	0.00	0.7	99.2	0.1	-1.16	0.83	0.78	2.21	3.6	0.003	0.59	0.0	0.04	15.97	0.00	2.516	6.12	2.40	2.0	98.0	0.0	1.99	1.45	0.83	0.79	0.90	12166	1544	2	0	0	0	0	logfile

• ← previous
• Page 141 of 4927
• next →