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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 9CER | 45516 | 2025-05-16 | 2024-06-27 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 612 | 2 | 142 | 0 | 0 | 6561 | logfile |
✘ | 9CER | 45516 | 2025-06-12 | 2024-06-27 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 612 | 2 | 142 | 0 | 0 | 6561 | logfile |
✘ | 9CER | 45516 | 2024-09-26 | 2024-06-27 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 612 | 2 | 142 | 0 | 0 | 6561 | logfile |
✔ | 9CFL | 45550 | 2025-05-12 | 2024-06-27 | 2.3 | 2.52 | 2.42 | 2.7 | 0.008 | 1.21 | 2.0 | 0.07 | 25.65 | 0.02 | 1.887 | 3.76 | 3.83 | 1.1 | 98.9 | 0.0 | -0.09 | 0.63 | 0.81 | 3.96 | 2.7 | 0.005 | 0.71 | 0.0 | 0.05 | 19.11 | 0.00 | 1.889 | 5.75 | 2.02 | 1.7 | 98.3 | 0.0 | 1.17 | 1.13 | 0.61 | 0.81 | 3.64 | 8925 | 1068 | 10 | 0 | 7 | 8 | 0 | logfile |
✔ | 9CFL | 45550 | 2025-04-29 | 2024-06-27 | 2.3 | 2.52 | 2.42 | 2.7 | 0.008 | 1.21 | 2.0 | 0.07 | 25.65 | 0.02 | 1.887 | 3.76 | 3.83 | 1.1 | 98.9 | 0.0 | -0.09 | 0.63 | 0.81 | 3.96 | 2.7 | 0.003 | 0.59 | 0.0 | 0.05 | 18.90 | 0.00 | 1.977 | 5.48 | 2.34 | 1.3 | 98.7 | 0.0 | 1.48 | 1.13 | 0.60 | 0.80 | 3.44 | 8925 | 1068 | 10 | 0 | 7 | 8 | 0 | logfile |
✔ | 9CFL | 45550 | 2025-06-07 | 2024-06-27 | 2.3 | 2.52 | 2.42 | 2.7 | 0.008 | 1.21 | 2.0 | 0.07 | 25.65 | 0.02 | 1.887 | 3.76 | 3.83 | 1.1 | 98.9 | 0.0 | -0.09 | 0.63 | 0.81 | 3.96 | 2.7 | 0.003 | 0.59 | 0.0 | 0.05 | 18.90 | 0.00 | 1.977 | 5.48 | 2.34 | 1.3 | 98.7 | 0.0 | 1.48 | 1.13 | 0.60 | 0.80 | 3.44 | 8925 | 1068 | 10 | 0 | 7 | 8 | 0 | logfile |
✘ | 9CEW | 45521 | 2024-10-13 | 2024-06-27 | 2.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15163 | 600 | 7 | 166 | 3 | 0 | 6758 | logfile |
✘ | 9CEW | 45521 | 2024-09-27 | 2024-06-27 | 2.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15163 | 600 | 7 | 166 | 3 | 0 | 6758 | logfile |
✔ | 9CES | 45517 | 2024-12-31 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.003 | 0.62 | 0.0 | 0.03 | 23.35 | 0.00 | 2.185 | 6.00 | 2.18 | 4.1 | 95.9 | 0.0 | 0.99 | 1.27 | 0.71 | 0.74 | 2.42 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2024-09-27 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.003 | 0.62 | 0.0 | 0.03 | 23.35 | 0.00 | 2.185 | 6.00 | 2.18 | 4.1 | 95.9 | 0.0 | 0.99 | 1.27 | 0.71 | 0.74 | 2.42 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2024-10-13 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.003 | 0.62 | 0.0 | 0.03 | 23.35 | 0.00 | 2.185 | 6.00 | 2.18 | 4.1 | 95.9 | 0.0 | 0.99 | 1.27 | 0.71 | 0.74 | 2.42 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2024-11-18 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.003 | 0.62 | 0.0 | 0.03 | 23.35 | 0.00 | 2.185 | 6.00 | 2.18 | 4.1 | 95.9 | 0.0 | 0.99 | 1.27 | 0.71 | 0.74 | 2.42 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2025-05-17 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.005 | 0.67 | 0.0 | 0.04 | 23.34 | 0.01 | 2.196 | 7.83 | 1.64 | 6.0 | 94.0 | 0.0 | 0.85 | 1.27 | 0.72 | 0.76 | 2.44 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2025-01-20 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.005 | 0.67 | 0.0 | 0.04 | 23.34 | 0.01 | 2.196 | 7.83 | 1.64 | 6.0 | 94.0 | 0.0 | 0.85 | 1.27 | 0.72 | 0.76 | 2.44 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CES | 45517 | 2025-06-13 | 2024-06-27 | 3.28 | 3.52 | 3.31 | 3.5 | 0.013 | 1.96 | 0.0 | 0.10 | 23.23 | 0.03 | 2.515 | 1.01 | 0.91 | 4.1 | 95.9 | 0.0 | -0.87 | 0.56 | 0.46 | 2.49 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 23.24 | 0.00 | 2.169 | 7.77 | 1.82 | 5.8 | 94.2 | 0.0 | 0.86 | 1.26 | 0.72 | 0.75 | 2.65 | 15839 | 612 | 4 | 181 | 0 | 0 | 7001 | logfile |
✔ | 9CEJ | 45503 | 2024-09-28 | 2024-06-26 | 2.53 | 2.84 | 2.56 | 2.8 | 0.003 | 0.60 | 0.0 | 0.04 | 12.85 | 0.00 | 2.060 | 7.19 | 0.04 | 1.7 | 98.2 | 0.1 | 0.38 | 0.56 | 0.84 | 3.63 | 2.8 | 0.003 | 0.48 | 0.0 | 0.03 | 15.14 | 0.00 | 2.370 | 4.41 | 1.51 | 0.7 | 99.3 | 0.0 | 4.44 | 1.23 | 0.55 | 0.85 | 3.31 | 69696 | 9720 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CEJ | 45503 | 2024-10-14 | 2024-06-26 | 2.53 | 2.84 | 2.56 | 2.8 | 0.003 | 0.60 | 0.0 | 0.04 | 12.85 | 0.00 | 2.060 | 7.19 | 0.04 | 1.7 | 98.2 | 0.1 | 0.38 | 0.56 | 0.84 | 3.63 | 2.8 | 0.003 | 0.47 | 0.0 | 0.03 | 15.13 | 0.00 | 2.281 | 4.37 | 1.59 | 0.7 | 99.3 | 0.0 | 4.44 | 0.90 | 0.55 | 0.85 | 3.29 | 69696 | 9720 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CEo | 45505 | 2025-01-23 | 2024-06-26 | 2.76 | 3.07 | 2.80 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 12.76 | 0.00 | 2.121 | 8.18 | 0.03 | 1.7 | 98.2 | 0.1 | 0.09 | 0.58 | 0.85 | 2.90 | 3.0 | 0.007 | 0.67 | 0.0 | 0.04 | 15.32 | 0.00 | 2.356 | 4.80 | 1.99 | 1.2 | 98.8 | 0.0 | 4.04 | 0.42 | 0.59 | 0.89 | 3.01 | 73416 | 10260 | 38 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CEJ | 45503 | 2025-01-22 | 2024-06-26 | 2.53 | 2.84 | 2.56 | 2.8 | 0.003 | 0.60 | 0.0 | 0.04 | 12.85 | 0.00 | 2.060 | 7.19 | 0.04 | 1.7 | 98.2 | 0.1 | 0.38 | 0.56 | 0.84 | 3.63 | 2.8 | 0.004 | 0.50 | 0.0 | 0.03 | 15.12 | 0.00 | 2.382 | 4.21 | 1.60 | 0.7 | 99.3 | 0.0 | 4.33 | 0.90 | 0.55 | 0.85 | 3.39 | 69696 | 9720 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CEo | 45505 | 2024-09-29 | 2024-06-26 | 2.76 | 3.07 | 2.80 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 12.76 | 0.00 | 2.121 | 8.18 | 0.03 | 1.7 | 98.2 | 0.1 | 0.09 | 0.58 | 0.85 | 2.90 | 3.0 | 0.003 | 0.58 | 0.0 | 0.03 | 15.17 | 0.00 | 2.118 | 5.02 | 1.27 | 0.7 | 99.3 | 0.0 | 4.92 | 0.40 | 0.58 | 0.87 | 2.44 | 73416 | 10260 | 38 | 0 | 0 | 0 | 0 | logfile |