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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9FTH | 50745 | 2024-09-29 | 2024-06-24 | 2.9 | 3.12 | 2.93 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 15.69 | 0.00 | 2.029 | 3.58 | 0.00 | 2.4 | 97.6 | 0.0 | 0.58 | 0.77 | 0.88 | 3.17 | 3.1 | 0.004 | 0.79 | 0.0 | 0.04 | 16.27 | 0.00 | 2.386 | 4.30 | 2.20 | 5.1 | 94.9 | 0.0 | 0.31 | 0.96 | 0.78 | 0.89 | 3.48 | 22780 | 3010 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTH | 50745 | 2025-01-25 | 2024-06-24 | 2.9 | 3.12 | 2.93 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 15.69 | 0.00 | 2.029 | 3.58 | 0.00 | 2.4 | 97.6 | 0.0 | 0.58 | 0.77 | 0.88 | 3.17 | 3.1 | 0.002 | 0.60 | 0.0 | 0.04 | 16.20 | 0.00 | 2.575 | 4.23 | 1.06 | 4.0 | 96.0 | 0.0 | 0.55 | 0.97 | 0.78 | 0.88 | 3.35 | 22780 | 3010 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9iJE | 60629 | 2025-02-13 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.70 | 0.00 | 2.590 | 2.76 | 3.17 | 2.2 | 97.8 | 0.0 | 1.51 | 0.36 | 0.58 | 0.79 | 3.38 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-01-16 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 17.68 | 0.00 | 2.530 | 6.96 | 4.07 | 3.1 | 96.9 | 0.0 | 0.68 | 1.15 | 0.57 | 0.76 | 2.41 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-02-13 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 17.68 | 0.00 | 2.530 | 6.96 | 4.07 | 3.1 | 96.9 | 0.0 | 0.68 | 1.15 | 0.57 | 0.76 | 2.41 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-03-14 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.68 | 0.00 | 2.474 | 6.47 | 3.67 | 2.8 | 97.2 | 0.0 | 0.65 | 1.14 | 0.57 | 0.75 | 2.29 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-04-30 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.88 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.68 | 0.00 | 2.474 | 6.47 | 3.67 | 2.8 | 97.2 | 0.0 | 0.65 | 1.14 | 0.57 | 0.75 | 2.29 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-05-12 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.88 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 17.67 | 0.00 | 2.530 | 6.85 | 3.87 | 3.0 | 97.0 | 0.0 | 0.68 | 1.15 | 0.56 | 0.75 | 2.38 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2025-06-08 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.88 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.68 | 0.00 | 2.474 | 6.47 | 3.67 | 2.8 | 97.2 | 0.0 | 0.65 | 1.14 | 0.57 | 0.75 | 2.29 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2024-09-25 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.002 | 0.58 | 0.0 | 0.04 | 17.63 | 0.00 | 2.473 | 6.31 | 3.05 | 2.8 | 97.2 | 0.0 | 0.82 | 1.15 | 0.56 | 0.74 | 2.12 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2024-10-11 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.002 | 0.58 | 0.0 | 0.04 | 17.63 | 0.00 | 2.473 | 6.31 | 3.05 | 2.8 | 97.2 | 0.0 | 0.82 | 1.15 | 0.56 | 0.74 | 2.12 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2024-11-15 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.002 | 0.58 | 0.0 | 0.04 | 17.63 | 0.00 | 2.473 | 6.31 | 3.05 | 2.8 | 97.2 | 0.0 | 0.82 | 1.15 | 0.56 | 0.74 | 2.12 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJD | 60628 | 2024-12-28 | 2024-06-22 | 2.76 | 3.23 | 2.98 | 3.2 | 0.006 | 0.78 | 1.0 | 0.05 | 16.98 | 0.01 | 2.181 | 14.24 | 1.73 | 3.1 | 96.8 | 0.2 | 0.20 | 0.55 | 0.73 | 2.81 | 3.2 | 0.002 | 0.58 | 0.0 | 0.04 | 17.63 | 0.00 | 2.473 | 6.31 | 3.05 | 2.8 | 97.2 | 0.0 | 0.82 | 1.15 | 0.56 | 0.74 | 2.12 | 9371 | 1227 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iJE | 60629 | 2024-12-28 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 16.72 | 0.00 | 2.562 | 2.71 | 2.86 | 2.2 | 97.8 | 0.0 | 1.57 | 0.37 | 0.60 | 0.80 | 3.36 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2024-11-15 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 16.72 | 0.00 | 2.562 | 2.71 | 2.86 | 2.2 | 97.8 | 0.0 | 1.57 | 0.37 | 0.60 | 0.80 | 3.36 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2024-10-11 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 16.72 | 0.00 | 2.562 | 2.71 | 2.86 | 2.2 | 97.8 | 0.0 | 1.57 | 0.37 | 0.60 | 0.80 | 3.36 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2024-09-25 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 16.72 | 0.00 | 2.562 | 2.71 | 2.86 | 2.2 | 97.8 | 0.0 | 1.57 | 0.37 | 0.60 | 0.80 | 3.36 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2025-06-08 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.66 | 0.00 | 2.567 | 2.82 | 2.86 | 2.1 | 97.9 | 0.0 | 1.77 | 0.37 | 0.60 | 0.79 | 3.18 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2025-05-12 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 16.60 | 0.00 | 2.557 | 2.82 | 3.27 | 2.2 | 97.8 | 0.0 | 1.43 | 0.37 | 0.58 | 0.79 | 3.44 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |
✔ | 9iJE | 60629 | 2025-04-30 | 2024-06-22 | 2.34 | 2.89 | 2.69 | 2.9 | 0.005 | 0.70 | 0.0 | 0.05 | 15.99 | 0.01 | 2.240 | 6.01 | 2.15 | 2.2 | 97.8 | 0.0 | 1.09 | 0.60 | 0.79 | 3.56 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.66 | 0.00 | 2.567 | 2.82 | 2.86 | 2.1 | 97.9 | 0.0 | 1.77 | 0.37 | 0.60 | 0.79 | 3.18 | 9340 | 1227 | 7 | 0 | 1 | 1 | 0 | logfile |