Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BEE	44477	2025-03-05	2024-04-15	3.4	3.98	3.20	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.57	0.0	0.05	15.77	0.00	2.346	6.84	3.45	4.9	95.1	0.0	-0.50	1.59	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9BEE	44477	2025-04-26	2024-04-15	3.4	3.98	3.20	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.57	0.0	0.05	15.77	0.00	2.346	6.84	3.45	4.9	95.1	0.0	-0.50	1.59	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9BEE	44477	2024-12-27	2024-04-15	3.4	3.98	3.21	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.58	0.0	0.05	15.70	0.00	2.275	5.87	3.45	5.4	94.6	0.0	-0.63	1.54	0.50	0.68	2.02	3046	189	2	0	7	0	1501	logfile
✔	8Z3o	39749	2025-04-26	2024-04-15	3.3	2.24	3.16	2.1	0.008	0.98	1.0	0.06	14.14	0.01	2.386	9.88	0.98	7.4	92.6	0.0	-0.69	0.65	0.78	5.58	2.0	0.003	0.60	0.0	0.04	15.99	0.00	2.572	3.86	0.00	2.8	97.2	0.0	0.62	0.86	0.66	0.79	3.52	2159	286	1	0	0	0	0	logfile
✔	9BEE	44477	2025-02-10	2024-04-15	3.4	3.98	3.21	3.9	0.013	1.84	1.0	0.10	11.72	0.02	2.467	4.56	0.00	11.9	88.1	0.0	-2.32	0.47	0.59	1.69	3.9	0.002	0.58	0.0	0.05	15.83	0.00	2.356	6.19	3.45	3.8	96.2	0.0	-0.44	1.53	0.50	0.68	2.14	3046	189	2	0	7	0	1501	logfile
✔	9EZM	50089	2025-01-21	2024-04-12	2.9	2.91	2.78	2.9	0.004	0.69	0.0	0.05	13.38	0.01	2.054	2.95	0.00	1.7	98.3	0.0	-1.94	0.55	0.87	3.26	2.9	0.005	0.68	0.0	0.05	16.92	0.00	2.460	1.87	4.05	2.6	97.4	0.0	-0.15	1.20	0.55	0.89	3.19	68022	8766	18	0	0	0	0	logfile
✔	8Z1X	39739	2025-02-14	2024-04-12	3.2	2.35	3.21	2.1	0.019	2.02	43.0	1.50	13.05	0.01	1.925	0.41	0.00	1.2	98.8	0.0	-1.03	0.69	0.73	4.07	2.1	0.013	2.33	0.0	0.45	15.69	0.00	2.320	5.63	2.33	1.4	98.6	0.0	1.02	0.55	0.81	0.81	2.90	9648	1240	6	0	3	0	0	logfile
✔	8Z1V	39737	2025-04-30	2024-04-12	3.16	2.44	3.14	2.1	0.026	2.22	84.0	0.24	12.47	0.01	2.288	0.52	0.00	0.7	99.3	0.0	-0.95	0.68	0.72	3.64	2.2	0.003	0.68	0.0	0.04	16.01	0.00	2.522	4.90	2.24	1.6	98.4	0.0	1.48	1.17	0.78	0.81	2.29	9562	1234	6	0	2	0	0	logfile
✔	8Z1W	39738	2025-02-14	2024-04-12	3.0	2.22	3.04	2.0	0.018	1.98	35.0	0.17	12.38	0.01	2.537	0.05	0.10	1.3	98.7	0.0	-0.48	0.67	0.73	4.77	2.0	0.004	0.93	1.0	0.05	16.02	0.00	2.524	5.24	1.75	1.7	98.3	0.0	1.65	0.48	0.78	0.82	3.52	9619	1237	6	0	3	0	0	logfile
✔	8Z1V	39737	2025-03-14	2024-04-12	3.16	2.44	3.14	2.1	0.025	2.21	84.0	0.24	12.47	0.01	2.288	0.52	0.00	0.7	99.3	0.0	-0.95	0.68	0.72	3.64	2.2	0.003	0.62	0.0	0.04	16.06	0.00	2.524	5.06	2.05	1.7	98.3	0.0	1.47	1.17	0.78	0.81	2.43	9562	1234	6	0	2	0	0	logfile
✔	8Z21	39742	2025-04-30	2024-04-12	3.17	2.37	3.17	2.1	0.016	1.90	24.0	0.13	12.03	0.01	2.544	0.05	0.00	1.4	98.6	0.0	-0.98	0.79	0.81	4.45	2.1	0.003	0.67	0.0	0.04	15.01	0.00	2.528	4.95	1.84	1.7	98.3	0.0	1.27	0.71	0.79	0.82	2.23	9545	1235	6	0	2	0	0	logfile
✔	8Z1V	39737	2025-02-14	2024-04-12	3.16	2.44	3.14	2.1	0.025	2.21	84.0	0.24	12.47	0.01	2.288	0.52	0.00	0.7	99.3	0.0	-0.95	0.68	0.72	3.64	2.2	0.004	0.63	0.0	0.04	15.95	0.00	2.536	5.11	1.95	1.6	98.4	0.0	1.48	1.17	0.78	0.82	2.42	9562	1234	6	0	2	0	0	logfile
✔	8Z27	39743	2025-01-19	2024-04-12	2.86	3.87	2.96	3.2	0.007	1.41	9.0	0.11	24.39	0.02	2.290	7.15	32.69	1.4	98.2	0.4	3.16	0.64	0.48	0.87	3.2	0.003	0.78	0.0	0.04	18.35	0.01	2.552	14.65	3.63	4.2	95.6	0.2	0.17	1.35	0.77	0.74	0.79	8596	1047	8	0	14	0	0	logfile
✔	8Z27	39743	2024-12-30	2024-04-12	2.86	3.87	2.96	3.2	0.007	1.41	9.0	0.11	24.39	0.02	2.290	7.15	32.69	1.4	98.2	0.4	3.16	0.64	0.48	0.87	3.2	0.004	0.82	0.0	0.05	18.30	0.01	2.499	15.95	3.95	4.6	95.3	0.1	-0.01	1.35	0.78	0.75	0.73	8596	1047	8	0	14	0	0	logfile
✔	9BDE	44450	2025-01-21	2024-04-11	4.18	4.60	4.16	4.2	0.002	0.59	0.0	0.04	13.84	0.00	2.153	18.99	0.00	6.7	93.3	0.0	-1.80	0.86	0.78	—	4.2	0.004	0.71	0.0	0.04	13.90	0.00	2.098	17.93	0.00	8.8	91.2	0.0	-2.36	0.36	0.87	0.80	—	17216	2340	8	0	12	0	0	logfile
✔	9BD8	44446	2025-01-14	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.65	0.0	0.04	13.24	0.00	2.532	21.15	0.00	8.8	91.2	0.0	-2.46	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2025-02-11	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.65	0.0	0.04	13.24	0.00	2.532	21.15	0.00	8.8	91.2	0.0	-2.46	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2025-03-06	2024-04-11	4.8	6.12	4.01	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.66	0.0	0.04	13.27	0.00	2.535	20.86	0.00	8.9	91.1	0.0	-2.58	0.32	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2025-04-27	2024-04-11	4.8	6.12	4.01	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.65	0.0	0.04	13.18	0.00	2.546	18.16	0.00	7.4	92.6	0.0	-2.48	0.33	0.86	0.82	—	5369	726	3	0	1	0	0	logfile
✔	9BD8	44446	2024-12-27	2024-04-11	4.8	6.12	4.09	5.1	0.003	0.63	0.0	0.04	13.22	0.00	2.141	25.69	0.00	7.9	92.1	0.0	-2.18	0.86	0.81	—	5.1	0.003	0.63	0.0	0.04	13.11	0.00	2.534	19.03	0.00	7.8	92.2	0.0	-2.44	0.30	0.86	0.82	—	5369	726	3	0	1	0	0	logfile

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