Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9iJD	60628	2024-12-28	2024-06-22	2.76	3.23	2.98	3.2	0.006	0.78	1.0	0.05	16.98	0.01	2.181	14.24	1.73	3.1	96.8	0.2	0.20	0.55	0.73	2.81	3.2	0.002	0.58	0.0	0.04	17.63	0.00	2.473	6.31	3.05	2.8	97.2	0.0	0.82	1.15	0.56	0.74	2.12	9371	1227	7	0	1	0	0	logfile
✔	9iJD	60628	2024-11-15	2024-06-22	2.76	3.23	2.98	3.2	0.006	0.78	1.0	0.05	16.98	0.01	2.181	14.24	1.73	3.1	96.8	0.2	0.20	0.55	0.73	2.81	3.2	0.002	0.58	0.0	0.04	17.63	0.00	2.473	6.31	3.05	2.8	97.2	0.0	0.82	1.15	0.56	0.74	2.12	9371	1227	7	0	1	0	0	logfile
✔	9iJ3	60614	2025-01-14	2024-06-21	2.6	2.95	2.79	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.003	0.68	0.0	0.04	20.34	0.00	2.139	16.07	3.30	9.9	90.0	0.1	-1.25	0.45	0.59	0.67	1.01	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2024-12-27	2024-06-21	2.6	2.95	2.79	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.005	0.77	0.0	0.05	20.47	0.01	2.102	18.06	2.40	9.9	90.0	0.1	-1.45	0.47	0.56	0.65	1.51	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2025-06-05	2024-06-21	2.6	2.95	2.80	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.005	0.75	0.0	0.05	20.39	0.01	2.124	19.02	3.90	10.1	89.7	0.1	-1.56	0.45	0.56	0.65	1.42	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2025-05-10	2024-06-21	2.6	2.95	2.80	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.003	0.68	0.0	0.04	20.34	0.00	2.139	16.07	3.30	9.9	90.0	0.1	-1.25	0.45	0.59	0.67	1.01	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2025-04-28	2024-06-21	2.6	2.95	2.80	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.005	0.75	0.0	0.05	20.39	0.01	2.124	19.02	3.90	10.1	89.7	0.1	-1.56	0.45	0.56	0.65	1.42	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2025-03-11	2024-06-21	2.6	2.95	2.80	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.005	0.75	0.0	0.05	20.39	0.01	2.124	19.02	3.90	10.1	89.7	0.1	-1.56	0.45	0.56	0.65	1.42	7005	738	4	51	1	0	0	logfile
✔	9iJ3	60614	2025-02-11	2024-06-21	2.6	2.95	2.79	3.0	0.005	0.99	0.0	0.05	20.45	0.01	1.968	11.06	1.20	8.8	91.1	0.1	-2.04	0.59	0.61	1.17	3.0	0.003	0.68	0.0	0.04	20.34	0.00	2.139	16.07	3.30	9.9	90.0	0.1	-1.25	0.45	0.59	0.67	1.01	7005	738	4	51	1	0	0	logfile
✔	9FSM	50728	2025-05-18	2024-06-21	2.47	3.36	2.52	3.2	0.006	0.65	0.0	0.04	17.81	0.00	2.244	7.41	3.39	5.0	95.0	0.0	0.04	0.61	0.63	0.28	3.1	0.003	0.59	0.0	0.04	17.88	0.00	2.487	6.57	2.39	3.4	96.6	0.0	0.35	0.57	0.68	0.85	3.76	17060	2260	20	0	10	0	0	logfile
✔	9iiU	60605	2025-06-18	2024-06-21	2.98	3.51	3.12	3.4	0.008	1.19	0.0	0.04	17.70	0.01	2.010	5.29	0.00	2.9	96.9	0.2	1.55	0.68	0.83	3.43	3.4	0.004	0.59	0.0	0.04	17.67	0.00	2.276	10.76	1.23	2.9	96.9	0.1	1.30	1.04	0.64	0.81	2.67	21452	2301	27	0	67	2	0	logfile
✔	9FSM	50728	2025-06-15	2024-06-21	2.47	3.36	2.52	3.2	0.006	0.65	0.0	0.04	17.81	0.00	2.244	7.41	3.39	5.0	95.0	0.0	0.04	0.61	0.63	0.28	3.1	0.004	0.61	0.0	0.04	17.96	0.00	2.484	7.03	2.50	4.1	95.9	0.0	0.32	0.56	0.68	0.85	4.11	17060	2260	20	0	10	0	0	logfile
✔	9FSM	50728	2025-01-21	2024-06-21	2.47	3.36	2.51	3.2	0.006	0.65	0.0	0.04	17.81	0.00	2.244	7.41	3.39	5.0	95.0	0.0	0.04	0.61	0.63	0.28	3.1	0.003	0.59	0.0	0.04	17.88	0.00	2.487	6.57	2.39	3.4	96.6	0.0	0.35	0.57	0.68	0.85	3.76	17060	2260	20	0	10	0	0	logfile
✔	9iJ4	60615	2025-05-10	2024-06-21	2.7	3.01	2.82	3.0	0.006	0.91	0.0	0.05	19.91	0.01	1.731	8.91	0.88	6.5	93.3	0.1	-1.89	0.62	0.65	1.52	3.0	0.003	0.65	0.0	0.04	20.19	0.00	2.327	12.53	3.68	5.9	94.0	0.1	-0.85	0.35	0.59	0.68	2.22	7129	755	4	51	1	0	0	logfile
✔	9iJ4	60615	2025-04-28	2024-06-21	2.7	3.01	2.82	3.0	0.006	0.91	0.0	0.05	19.91	0.01	1.731	8.91	0.88	6.5	93.3	0.1	-1.89	0.62	0.65	1.52	3.0	0.004	0.70	0.0	0.05	20.15	0.01	2.355	14.27	3.09	6.5	93.3	0.1	-1.09	0.38	0.59	0.69	2.02	7129	755	4	51	1	0	0	logfile
✔	9iJ4	60615	2025-06-05	2024-06-21	2.7	3.01	2.82	3.0	0.006	0.91	0.0	0.05	19.91	0.01	1.731	8.91	0.88	6.5	93.3	0.1	-1.89	0.62	0.65	1.52	3.0	0.004	0.70	0.0	0.05	20.15	0.01	2.355	14.27	3.09	6.5	93.3	0.1	-1.09	0.38	0.59	0.69	2.02	7129	755	4	51	1	0	0	logfile
✔	9iJ4	60615	2025-03-12	2024-06-21	2.7	3.01	2.82	3.0	0.006	0.91	0.0	0.05	19.91	0.01	1.731	8.91	0.88	6.5	93.3	0.1	-1.89	0.62	0.65	1.52	3.0	0.004	0.70	0.0	0.05	20.15	0.01	2.355	14.27	3.09	6.5	93.3	0.1	-1.09	0.38	0.59	0.69	2.02	7129	755	4	51	1	0	0	logfile
✔	9iJ4	60615	2025-02-12	2024-06-21	2.7	3.01	2.81	3.0	0.006	0.91	0.0	0.05	19.91	0.01	1.731	8.91	0.88	6.5	93.3	0.1	-1.89	0.62	0.65	1.52	3.0	0.003	0.65	0.0	0.04	20.19	0.00	2.327	12.53	3.68	5.9	94.0	0.1	-0.85	0.35	0.59	0.68	2.22	7129	755	4	51	1	0	0	logfile
✔	9iJ2	60613	2025-05-09	2024-06-21	3.9	4.21	4.00	4.2	0.005	1.13	0.0	0.06	22.17	0.01	2.273	9.61	0.32	9.8	90.2	0.0	-3.30	0.59	0.49	1.13	4.1	0.003	0.79	0.0	0.04	21.79	0.00	2.546	16.67	3.80	8.4	91.4	0.3	-2.19	1.26	0.60	0.51	0.94	3729	351	3	43	0	0	0	logfile
✔	9iiZ	60610	2025-06-04	2024-06-21	3.8	4.41	3.86	4.3	0.005	1.23	0.0	0.07	22.77	0.01	2.256	10.55	0.59	9.4	90.6	0.0	-3.44	0.71	0.60	-0.85	4.3	0.003	0.86	0.0	0.04	22.51	0.00	2.524	21.36	4.72	8.0	91.7	0.3	-2.09	1.11	0.72	0.62	0.82	4080	377	3	49	0	0	0	logfile

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