Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9C9Y	45376	2024-12-27	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.2	0.004	0.65	0.0	0.04	18.29	0.00	2.062	4.93	2.54	4.7	95.3	0.0	0.16	0.39	0.78	0.82	1.64	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2025-02-11	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.3	0.003	0.60	0.0	0.04	18.31	0.00	2.126	4.61	2.40	3.8	96.2	0.0	0.28	0.92	0.78	0.81	1.78	6225	773	4	8	2	0	0	logfile
✘	9C9Y	45376	2025-03-11	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6225	773	4	8	2	0	0	logfile
✘	9C9Y	45376	2025-04-27	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2025-05-10	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.3	0.003	0.60	0.0	0.04	18.31	0.00	2.126	4.61	2.40	3.8	96.2	0.0	0.28	0.92	0.78	0.81	1.78	6225	773	4	8	2	0	0	logfile
✘	9C9Y	45376	2025-06-05	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2024-09-23	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.2	0.004	0.65	0.0	0.04	18.29	0.00	2.062	4.93	2.54	4.7	95.3	0.0	0.16	0.39	0.78	0.82	1.64	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2024-10-10	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.2	0.004	0.65	0.0	0.04	18.29	0.00	2.062	4.93	2.54	4.7	95.3	0.0	0.16	0.39	0.78	0.82	1.64	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2024-11-14	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.2	0.004	0.65	0.0	0.04	18.29	0.00	2.062	4.93	2.54	4.7	95.3	0.0	0.16	0.39	0.78	0.82	1.64	6225	773	4	8	2	0	0	logfile
✔	9CA0	45378	2024-09-23	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-11-14	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-10-10	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-12-27	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	8ZY9	60559	2025-05-16	2024-06-16	2.7	3.68	2.75	3.2	0.004	0.74	0.0	0.05	13.65	0.01	2.252	3.43	0.00	4.6	95.4	0.1	-1.83	0.87	0.87	2.96	3.3	0.003	0.61	0.0	0.04	14.83	0.00	2.544	4.98	0.96	3.6	96.4	0.0	0.66	1.10	0.86	0.87	2.75	14481	1749	12	0	16	0	0	logfile
✔	8ZYA	60560	2025-02-12	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.73	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.003	0.58	0.0	0.04	16.08	0.00	2.567	5.81	2.15	4.0	96.0	0.0	-0.12	1.15	0.54	0.73	2.42	7306	884	6	0	8	0	0	logfile
✘	8ZYA	60560	2025-03-12	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.73	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-04-28	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.57	0.0	0.04	16.04	0.00	2.408	5.46	1.77	3.8	96.2	0.0	0.05	1.15	0.53	0.72	2.24	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-05-11	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.56	0.0	0.04	16.05	0.00	2.572	5.88	1.90	3.4	96.6	0.0	-0.04	1.15	0.54	0.73	2.30	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-06-06	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.57	0.0	0.04	16.04	0.00	2.408	5.46	1.77	3.8	96.2	0.0	0.05	1.15	0.53	0.72	2.24	7306	884	6	0	8	0	0	logfile
✔	9C9W	45374	2025-06-12	2024-06-16	4.25	3.29	4.36	2.2	0.005	0.80	0.0	0.04	19.22	0.01	2.070	19.12	0.15	9.6	90.2	0.2	-1.54	0.72	0.69	—	2.1	0.003	0.78	0.0	0.04	19.21	0.00	2.281	13.96	0.00	8.4	91.5	0.1	-1.18	1.43	0.72	0.71	—	13761	1546	8	80	1	0	0	logfile

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