Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9CA4	45380	2025-05-10	2024-06-16	3.01	2.50	3.43	2.2	0.005	0.87	1.0	0.04	14.82	0.01	2.091	6.79	0.00	5.2	94.6	0.1	-0.38	0.76	0.79	2.74	2.2	0.004	0.64	0.0	0.04	17.07	0.00	2.128	6.47	1.95	5.0	95.0	0.0	0.11	0.93	0.78	0.81	1.89	6230	773	5	8	2	0	0	logfile
✔	9CA4	45380	2025-04-27	2024-06-16	3.01	2.50	3.43	2.2	0.005	0.87	1.0	0.04	14.82	0.01	2.091	6.79	0.00	5.2	94.6	0.1	-0.38	0.76	0.79	2.74	2.2	0.004	0.62	0.0	0.04	17.20	0.00	2.180	5.90	2.55	5.0	95.0	0.0	0.21	0.93	0.78	0.81	1.99	6230	773	5	8	2	0	0	logfile
✔	9CA4	45380	2025-03-11	2024-06-16	3.01	2.50	3.43	2.2	0.005	0.87	1.0	0.04	14.82	0.01	2.091	6.79	0.00	5.2	94.6	0.1	-0.38	0.76	0.79	2.74	2.2	0.004	0.62	0.0	0.04	17.20	0.00	2.180	5.90	2.55	5.0	95.0	0.0	0.21	0.93	0.78	0.81	1.99	6230	773	5	8	2	0	0	logfile
✔	9CA4	45380	2025-02-11	2024-06-16	3.01	2.50	3.44	2.2	0.005	0.87	1.0	0.04	14.82	0.01	2.091	6.79	0.00	5.2	94.6	0.1	-0.38	0.76	0.79	2.74	2.2	0.004	0.64	0.0	0.04	17.07	0.00	2.128	6.47	1.95	5.0	95.0	0.0	0.11	0.93	0.78	0.81	1.89	6230	773	5	8	2	0	0	logfile
✔	9C9W	45374	2025-05-16	2024-06-16	4.25	3.29	4.36	2.2	0.005	0.80	0.0	0.04	19.22	0.01	2.070	19.12	0.15	9.6	90.2	0.2	-1.54	0.72	0.69	—	2.2	0.004	0.81	0.0	0.05	19.24	0.01	2.268	15.61	0.07	9.1	90.9	0.1	-1.42	1.45	0.73	0.72	—	13761	1546	8	80	1	0	0	logfile
✔	9C9W	45374	2025-06-12	2024-06-16	4.25	3.29	4.36	2.2	0.005	0.80	0.0	0.04	19.22	0.01	2.070	19.12	0.15	9.6	90.2	0.2	-1.54	0.72	0.69	—	2.1	0.003	0.78	0.0	0.04	19.21	0.00	2.281	13.96	0.00	8.4	91.5	0.1	-1.18	1.43	0.72	0.71	—	13761	1546	8	80	1	0	0	logfile
✔	8ZYA	60560	2025-02-12	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.73	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.003	0.58	0.0	0.04	16.08	0.00	2.567	5.81	2.15	4.0	96.0	0.0	-0.12	1.15	0.54	0.73	2.42	7306	884	6	0	8	0	0	logfile
✘	8ZYA	60560	2025-03-12	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.73	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-04-28	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.57	0.0	0.04	16.04	0.00	2.408	5.46	1.77	3.8	96.2	0.0	0.05	1.15	0.53	0.72	2.24	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-05-11	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.56	0.0	0.04	16.05	0.00	2.572	5.88	1.90	3.4	96.6	0.0	-0.04	1.15	0.54	0.73	2.30	7306	884	6	0	8	0	0	logfile
✔	8ZYA	60560	2025-06-06	2024-06-16	2.5	3.15	2.97	3.1	0.004	0.75	0.0	0.05	14.03	0.01	2.290	4.34	0.13	4.5	95.4	0.1	-1.47	0.58	0.75	3.06	3.1	0.002	0.57	0.0	0.04	16.04	0.00	2.408	5.46	1.77	3.8	96.2	0.0	0.05	1.15	0.53	0.72	2.24	7306	884	6	0	8	0	0	logfile
✔	8ZY4	60555	2025-06-22	2024-06-16	2.53	3.34	2.56	3.0	0.004	0.69	0.0	0.05	15.75	0.01	2.222	3.18	2.47	4.1	95.9	0.0	-1.62	0.86	0.87	3.28	3.0	0.007	0.71	0.0	0.05	15.61	0.00	2.404	4.17	2.51	6.0	94.0	0.0	-0.80	0.31	0.87	0.89	3.23	26181	3219	21	0	75	0	0	logfile
✔	8ZY4	60555	2025-05-25	2024-06-16	2.53	3.34	2.56	3.0	0.004	0.69	0.0	0.05	15.75	0.01	2.222	3.18	2.47	4.1	95.9	0.0	-1.62	0.86	0.87	3.28	3.0	0.004	0.63	0.0	0.05	15.55	0.00	2.443	3.64	2.58	5.0	95.0	0.0	-0.72	0.31	0.87	0.88	3.22	26181	3219	21	0	75	0	0	logfile
✔	8ZY7	60558	2025-06-22	2024-06-16	3.45	3.67	3.43	3.6	0.003	0.69	0.0	0.05	15.43	0.00	2.267	2.88	3.66	3.7	96.3	0.0	-1.90	0.82	0.86	1.95	3.6	0.002	0.59	0.0	0.05	15.50	0.00	2.447	3.00	3.37	3.5	96.5	0.0	-0.93	0.23	0.82	0.88	1.83	25890	3195	24	0	69	0	0	logfile
✔	8ZY7	60558	2025-05-24	2024-06-16	3.45	3.67	3.43	3.6	0.003	0.69	0.0	0.05	15.43	0.00	2.267	2.88	3.66	3.7	96.3	0.0	-1.90	0.82	0.86	1.95	3.6	0.002	0.57	0.0	0.05	15.47	0.00	2.431	3.02	3.94	3.5	96.5	0.0	-0.86	0.23	0.82	0.87	1.81	25890	3195	24	0	69	0	0	logfile
✔	8ZY5	60556	2025-06-21	2024-06-16	3.8	3.56	3.78	3.6	0.005	0.97	0.0	0.06	14.40	0.01	2.283	5.19	0.23	6.7	93.2	0.2	-2.39	0.72	0.78	2.46	3.6	0.004	0.69	0.0	0.05	14.93	0.00	2.377	7.94	3.18	6.6	93.4	0.0	-1.24	0.41	0.73	0.80	2.47	24450	3030	15	0	63	0	0	logfile
✔	8ZY5	60556	2025-05-23	2024-06-16	3.8	3.56	3.78	3.6	0.005	0.97	0.0	0.06	14.40	0.01	2.283	5.19	0.23	6.7	93.2	0.2	-2.39	0.72	0.78	2.46	3.6	0.003	0.68	0.0	0.05	14.90	0.00	2.404	7.47	2.88	6.7	93.3	0.0	-1.26	0.41	0.73	0.80	2.47	24450	3030	15	0	63	0	0	logfile
✔	9C9Y	45376	2025-05-10	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.3	0.003	0.60	0.0	0.04	18.31	0.00	2.126	4.61	2.40	3.8	96.2	0.0	0.28	0.92	0.78	0.81	1.78	6225	773	4	8	2	0	0	logfile
✘	9C9Y	45376	2025-03-11	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6225	773	4	8	2	0	0	logfile
✔	9C9Y	45376	2025-02-11	2024-06-16	3.35	2.51	3.35	2.2	0.005	0.66	0.0	0.04	16.02	0.01	2.041	6.79	0.15	6.0	93.9	0.1	-0.01	0.77	0.79	2.18	2.3	0.003	0.60	0.0	0.04	18.31	0.00	2.126	4.61	2.40	3.8	96.2	0.0	0.28	0.92	0.78	0.81	1.78	6225	773	4	8	2	0	0	logfile

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