Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZY2	60553	2025-06-23	2024-06-16	2.9	3.71	2.92	3.3	0.006	0.79	2.0	0.05	14.21	0.01	2.276	3.26	0.17	3.4	96.6	0.0	-0.77	0.89	0.88	3.57	3.3	0.002	0.55	0.0	0.04	14.16	0.00	2.527	3.31	0.90	2.8	97.2	0.0	0.23	0.25	0.89	0.88	3.38	27099	3309	27	0	81	0	0	logfile
✔	9CA1	45379	2025-06-05	2024-06-16	3.26	2.47	3.27	2.2	0.004	0.59	0.0	0.04	15.56	0.01	2.120	5.31	0.00	4.2	95.7	0.1	0.28	0.77	0.80	2.18	2.2	0.003	0.58	0.0	0.04	17.60	0.00	2.094	5.79	3.15	4.0	96.0	0.0	0.22	0.31	0.79	0.82	1.62	6265	773	5	10	2	0	0	logfile
✔	9CA1	45379	2024-09-24	2024-06-16	3.26	2.47	3.27	2.2	0.004	0.59	0.0	0.04	15.56	0.01	2.120	5.31	0.00	4.2	95.7	0.1	0.28	0.77	0.80	2.18	2.2	0.003	0.59	0.0	0.04	17.49	0.00	2.111	5.23	3.60	3.7	96.3	0.0	0.26	0.31	0.79	0.83	1.90	6265	773	5	10	2	0	0	logfile
✔	9CA1	45379	2024-10-10	2024-06-16	3.26	2.47	3.27	2.2	0.004	0.59	0.0	0.04	15.56	0.01	2.120	5.31	0.00	4.2	95.7	0.1	0.28	0.77	0.80	2.18	2.2	0.003	0.59	0.0	0.04	17.49	0.00	2.111	5.23	3.60	3.7	96.3	0.0	0.26	0.31	0.79	0.83	1.90	6265	773	5	10	2	0	0	logfile
✔	9CA1	45379	2024-11-14	2024-06-16	3.26	2.47	3.27	2.2	0.004	0.59	0.0	0.04	15.56	0.01	2.120	5.31	0.00	4.2	95.7	0.1	0.28	0.77	0.80	2.18	2.2	0.003	0.59	0.0	0.04	17.49	0.00	2.111	5.23	3.60	3.7	96.3	0.0	0.26	0.31	0.79	0.83	1.90	6265	773	5	10	2	0	0	logfile
✔	9CA1	45379	2024-12-27	2024-06-16	3.26	2.47	3.27	2.2	0.004	0.59	0.0	0.04	15.56	0.01	2.120	5.31	0.00	4.2	95.7	0.1	0.28	0.77	0.80	2.18	2.2	0.003	0.59	0.0	0.04	17.49	0.00	2.111	5.23	3.60	3.7	96.3	0.0	0.26	0.31	0.79	0.83	1.90	6265	773	5	10	2	0	0	logfile
✔	8ZY1	60552	2025-05-24	2024-06-16	3.1	2.59	3.05	3.1	0.003	0.62	0.0	0.05	16.06	0.00	2.206	3.38	3.65	3.3	96.7	0.0	-1.60	0.73	0.85	2.54	3.1	0.003	0.58	0.0	0.04	15.80	0.00	2.486	3.46	4.44	3.3	96.7	0.0	-0.75	0.31	0.72	0.85	2.61	26025	3228	15	0	66	0	0	logfile
✔	8ZY1	60552	2025-06-22	2024-06-16	3.1	2.59	3.05	3.1	0.003	0.62	0.0	0.05	16.06	0.00	2.206	3.38	3.65	3.3	96.7	0.0	-1.60	0.73	0.85	2.54	3.1	0.003	0.72	2.0	0.04	15.83	0.00	2.169	3.79	4.15	3.3	96.7	0.0	-0.79	0.31	0.73	0.86	2.60	26025	3228	15	0	66	0	0	logfile
✔	8ZY2	60553	2025-05-25	2024-06-16	2.9	3.71	2.92	3.3	0.006	0.79	2.0	0.05	14.21	0.01	2.276	3.26	0.17	3.4	96.6	0.0	-0.77	0.89	0.88	3.57	3.3	0.002	0.56	0.0	0.04	14.21	0.00	2.480	3.37	0.97	2.7	97.3	0.0	0.14	0.26	0.89	0.87	3.44	27099	3309	27	0	81	0	0	logfile
✔	9CA0	45378	2024-10-10	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-12-27	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-09-23	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9CA0	45378	2024-11-14	2024-06-16	3.48	2.47	3.49	2.2	0.004	0.58	0.0	0.04	14.95	0.01	2.104	6.67	0.15	4.2	95.8	0.0	-0.73	0.77	0.78	2.35	2.2	0.004	0.57	0.0	0.04	17.36	0.00	2.492	6.35	2.25	3.9	96.1	0.0	-0.52	0.35	0.79	0.82	1.63	6265	773	5	10	1	0	0	logfile
✔	9C9U	45371	2025-03-05	2024-06-15	4.5	4.04	3.57	3.8	0.011	1.48	0.0	0.07	15.52	0.01	2.048	19.72	0.00	10.7	89.3	0.0	-3.13	0.72	0.61	—	3.8	0.003	1.23	0.0	0.09	16.30	0.01	2.288	19.21	0.00	11.3	88.7	0.0	-3.25	1.85	0.78	0.76	—	3018	444	18	0	0	0	0	logfile
✔	9C9U	45371	2025-04-27	2024-06-15	4.5	4.04	3.57	3.8	0.011	1.48	0.0	0.07	15.52	0.01	2.048	19.72	0.00	10.7	89.3	0.0	-3.13	0.72	0.61	—	3.8	0.003	1.23	0.0	0.09	16.30	0.01	2.288	19.21	0.00	11.3	88.7	0.0	-3.25	1.85	0.78	0.76	—	3018	444	18	0	0	0	0	logfile
✘	9C9U	45371	2025-05-09	2024-06-15	4.5	4.04	3.57	3.8	0.011	1.48	0.0	0.07	15.52	0.01	2.048	19.72	0.00	10.7	89.3	0.0	-3.13	0.72	0.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3018	444	18	0	0	0	0	logfile
✔	9C9U	45371	2025-06-04	2024-06-15	4.5	4.04	3.57	3.8	0.011	1.48	0.0	0.07	15.52	0.01	2.048	19.72	0.00	10.7	89.3	0.0	-3.13	0.72	0.61	—	3.8	0.003	1.23	0.0	0.09	16.30	0.01	2.288	19.21	0.00	11.3	88.7	0.0	-3.25	1.85	0.78	0.76	—	3018	444	18	0	0	0	0	logfile
✔	8ZXN	60545	2025-04-26	2024-06-14	3.06	3.28	2.99	3.3	0.009	1.27	0.0	0.08	12.40	0.01	2.516	0.13	0.77	1.5	98.5	0.0	-3.05	0.49	0.77	3.38	3.3	0.003	0.61	0.0	0.04	14.79	0.00	2.518	2.29	2.06	2.6	97.4	0.0	2.27	0.48	0.54	0.79	2.51	3653	471	2	0	2	0	0	logfile
✔	8ZXN	60545	2025-05-09	2024-06-14	3.06	3.28	2.99	3.3	0.009	1.27	0.0	0.08	12.40	0.01	2.516	0.13	0.77	1.5	98.5	0.0	-3.05	0.49	0.77	3.38	3.3	0.003	0.60	0.0	0.04	14.75	0.00	2.518	2.83	2.06	2.3	97.7	0.0	2.55	0.48	0.54	0.79	2.55	3653	471	2	0	2	0	0	logfile
✔	8ZXN	60545	2025-06-04	2024-06-14	3.06	3.28	2.99	3.3	0.009	1.27	0.0	0.08	12.40	0.01	2.516	0.13	0.77	1.5	98.5	0.0	-3.05	0.49	0.77	3.38	3.3	0.003	0.61	0.0	0.04	14.79	0.00	2.518	2.29	2.06	2.6	97.4	0.0	2.27	0.48	0.54	0.79	2.51	3653	471	2	0	2	0	0	logfile

• ← previous
• Page 161 of 5208
• next →