Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YNi	39424	2025-01-19	2024-03-11	3.66	4.28	3.83	4.0	0.002	0.42	0.0	0.03	13.96	0.00	2.202	5.65	0.00	2.0	98.0	0.0	1.62	0.81	0.83	0.77	4.0	0.003	0.64	0.0	0.04	16.69	0.00	2.346	6.84	1.55	2.6	97.3	0.1	1.23	1.19	0.81	0.83	1.05	13529	1657	11	0	0	0	0	logfile
✔	8YNi	39424	2024-11-17	2024-03-11	3.66	4.28	3.83	4.0	0.002	0.42	0.0	0.03	13.96	0.00	2.202	5.65	0.00	2.0	98.0	0.0	1.62	0.81	0.83	0.77	4.0	0.003	0.66	0.0	0.04	16.68	0.00	2.492	6.95	1.55	3.1	96.9	0.1	1.18	1.19	0.81	0.83	0.98	13529	1657	11	0	0	0	0	logfile
✔	9AZL	44015	2024-12-29	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.003	0.57	0.0	0.04	16.12	0.00	1.986	5.36	1.55	3.6	96.4	0.0	1.69	0.69	0.64	0.85	2.58	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2024-11-16	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.003	0.57	0.0	0.04	16.12	0.00	1.986	5.36	1.55	3.6	96.4	0.0	1.69	0.69	0.64	0.85	2.58	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2025-01-17	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.004	0.62	0.0	0.04	16.12	0.00	1.966	5.27	1.64	3.7	96.3	0.0	1.52	0.70	0.67	0.87	2.68	11252	1428	4	0	5	0	0	logfile
✔	8YN9	39419	2025-02-13	2024-03-10	2.3	2.56	2.39	2.5	0.004	0.63	0.0	0.06	10.63	0.00	2.237	4.32	0.73	1.5	98.5	0.0	1.12	0.70	0.84	5.10	2.6	0.002	0.51	0.0	0.04	13.41	0.00	2.524	5.26	1.57	2.2	97.8	0.0	1.68	0.38	0.71	0.85	4.29	9048	1130	6	0	8	2	0	logfile
✔	8YN9	39419	2025-01-16	2024-03-10	2.3	2.56	2.39	2.5	0.004	0.63	0.0	0.06	10.63	0.00	2.237	4.32	0.73	1.5	98.5	0.0	1.12	0.70	0.84	5.10	2.6	0.002	0.51	0.0	0.04	13.41	0.00	2.524	5.26	1.57	2.2	97.8	0.0	1.68	0.38	0.71	0.85	4.29	9048	1130	6	0	8	2	0	logfile
✔	8YN9	39419	2025-03-13	2024-03-10	2.3	2.56	2.39	2.5	0.004	0.63	0.0	0.06	10.63	0.00	2.237	4.32	0.73	1.5	98.5	0.0	1.12	0.70	0.84	5.10	2.5	0.003	0.86	1.0	0.04	13.42	0.00	2.364	5.93	1.88	2.5	97.5	0.0	1.63	0.38	0.71	0.85	4.42	9048	1130	6	0	8	2	0	logfile
✔	8YN9	39419	2024-11-15	2024-03-10	2.3	2.56	2.39	2.5	0.004	0.63	0.0	0.06	10.63	0.00	2.237	4.32	0.73	1.5	98.5	0.0	1.12	0.70	0.84	5.10	2.5	0.004	0.57	0.0	0.04	13.64	0.00	2.505	4.60	1.57	2.2	97.8	0.0	1.54	0.38	0.71	0.85	4.55	9048	1130	6	0	8	2	0	logfile
✔	8YN9	39419	2024-12-28	2024-03-10	2.3	2.56	2.39	2.5	0.004	0.63	0.0	0.06	10.63	0.00	2.237	4.32	0.73	1.5	98.5	0.0	1.12	0.70	0.84	5.10	2.5	0.004	0.57	0.0	0.04	13.64	0.00	2.505	4.60	1.57	2.2	97.8	0.0	1.54	0.38	0.71	0.85	4.55	9048	1130	6	0	8	2	0	logfile
✔	8YN4	39414	2024-12-28	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.003	0.62	0.0	0.04	14.58	0.00	2.521	7.18	2.96	1.8	98.2	0.0	1.53	1.24	0.67	0.81	3.13	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2024-11-15	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.003	0.62	0.0	0.04	14.58	0.00	2.521	7.18	2.96	1.8	98.2	0.0	1.53	1.24	0.67	0.81	3.13	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2025-03-13	2024-03-10	2.97	3.15	2.95	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.05	14.67	0.00	2.478	7.13	3.07	2.3	97.7	0.0	1.51	1.63	0.68	0.82	3.38	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2025-02-13	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.04	14.59	0.00	2.475	7.13	3.51	2.3	97.7	0.0	1.53	1.24	0.68	0.82	3.29	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2025-01-15	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.04	14.59	0.00	2.475	7.13	3.51	2.3	97.7	0.0	1.53	1.24	0.68	0.82	3.29	8661	1127	6	0	2	0	0	logfile
✔	8YN1	39411	2025-01-22	2024-03-10	3.09	2.91	3.04	2.9	0.008	0.91	0.0	0.05	15.15	0.01	2.145	8.06	0.00	5.3	94.5	0.1	-1.49	0.76	0.79	3.15	3.0	0.002	0.55	0.0	0.04	16.55	0.00	2.019	4.36	1.40	3.2	96.8	0.0	0.57	0.94	0.79	0.83	2.29	12186	1495	5	0	2	0	0	logfile
✔	8YN3	39413	2024-12-28	2024-03-10	2.56	2.65	2.55	2.7	0.003	0.46	0.0	0.05	9.76	0.00	2.248	3.92	0.79	1.4	98.6	0.0	1.26	0.72	0.86	4.65	2.7	0.003	0.52	0.0	0.04	14.16	0.00	2.456	3.86	2.03	2.0	98.0	0.0	1.74	0.40	0.71	0.86	3.66	8201	1042	6	0	2	0	0	logfile
✔	9AZ4	44012	2024-09-30	2024-03-10	3.37	4.52	—	2.1	0.007	1.06	0.0	0.06	13.82	0.01	2.069	2.58	0.00	3.5	96.4	0.0	-2.13	0.89	0.84	1.76	2.1	0.003	0.62	0.0	0.04	14.49	0.00	1.960	7.00	0.35	3.1	96.9	0.0	1.34	0.37	0.89	0.85	1.41	23865	3015	14	0	12	0	0	logfile
✔	8YN5	39415	2025-03-13	2024-03-10	2.7	2.85	2.68	2.8	0.002	0.53	0.0	0.06	9.60	0.00	2.209	4.33	0.42	1.6	98.4	0.0	1.27	0.71	0.85	4.97	2.8	0.004	0.59	0.0	0.04	13.52	0.00	2.528	5.38	1.67	1.8	98.2	0.0	1.95	1.17	0.71	0.86	3.81	9047	1141	6	0	6	0	0	logfile
✔	9AZ4	44012	2024-07-23	2024-03-10	3.37	4.52	—	2.1	0.007	1.06	0.0	0.06	13.82	0.01	2.069	2.58	0.00	3.5	96.4	0.0	-2.13	0.89	0.84	1.76	2.1	0.004	0.78	0.0	0.04	14.59	0.00	1.903	13.37	0.54	4.0	96.0	0.0	1.03	0.40	0.89	0.84	1.58	23865	3015	14	0	12	0	0	logfile

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